| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is lplT [H]
Identifier: 116689481
GI number: 116689481
Start: 1612400
End: 1614334
Strand: Direct
Name: lplT [H]
Synonym: Bcen2424_1459
Alternate gene names: 116689481
Gene position: 1612400-1614334 (Clockwise)
Preceding gene: 116689480
Following gene: 116689482
Centisome position: 46.28
GC content: 66.61
Gene sequence:
>1935_bases ATGAGCGATCACACGCAAGCCACTTCGGGGCGGCGCGACGAACGTCGCGCCCACGCATCGCAGTTCGACCTGCTGCGCGA GCGCCGCTTCGCGCCGTTCTTCACGACCCAGTTCCTCGGCGCGCTGAACGACAACGTCTTCAAGATCGGTTTCACGTCGC TCGTCACGTATCACACCGCGCGGTTCTCCGGCGTCGATGCGAAGACGGCCGCGTTCCTGATTTCCGCGATCTTCATCCTG CCGTTCGTGCTGTTCTCGGCCACCTCCGGCCAGATCGCCGACAAATACGACAAGGCGACCCTCACGCGCTTCGTGAAATC GTTCGAGATCGTGCTGATGCTGGTCGGCGCGGCCGGCTTCGTCACGCACAGCGCGACACTGCTGTATCTGTGCACGTTCA TGATGGGGATGCACTCGACGCTGTTCGGGCCCGTCAAGTATTCGTACCTGCCGCAGCATCTCGGCGAACATGAGCTGGTC GGCGGCAACGGGCTCGTCGAGATGGGCACGTTCATCGCGATCCTGATCGGCACGATCATCGGCGGCGCGGCGGCCGGCAT CGAAGGCAGCGGCGAGCGTGTGCTCGCGGTGAGCGTCGTCGTCATCGCGCTGGCCGGGCGGCTCGTCGCGCAGCGCGTGC CGCCGACACCCGCGCCGCAGCCCGACCTCGTGATCAACTGGAACCCGGTCAGCGAAACCTGGCGCAACCTCGGCCTCGCG CGCCAGAACCGCACGGTGTTCCTGAGCCTGCTCGGCATCTCGTGGCTGTGGTTCGTCGGCGCGACCTTCCTCACGTCGTT CTTCAATTTCGCGAAGGACGTGCTGTCCGCGAGCCCCGACGTCGTCACGATCCTGCTCGCGACGTTCTCGGTCGGCATCG GCCTCGGCTCGCTGCTGTGCGAGCGGCTGTCGCAGCGGCGCGTCGAGATCGGCCTCGTGCCGCTCGGCTCGATCGGCATC AGCGTGTTCGCGATCGAGCTGTATTTCGCGAGCCATGCGCTGCCGTCGCCCGGCCATCTGCTGTCGGTCGGCGAATTCCT GGCCGGTGCGCGCCACTGGCGCATCCTCGCCGACCTGTTCCTGCTCGCGATGTTCGGCGGCTTCTACAGCGTGCCGCTGT ACGCGCTGATCCAGAGCCGCAGCGCGCCGACGCACCGCGCACGGATCATCGCCGCGAACAACATCCTGAACGCGCTGTTC ATGATCCTGTCGGCCGTGATGGCGATGGGGCTGACCAAGGCCGGGGTCGACATCCCGGGGCTGTTCCTCGTCACCGCGCT ATTGAACGTCGTAGTCGCGACGTATATCTACCTGCTCGTGCCCGAGTTCCTGCTGCGCTTCGTCGCGTGGGTGCTCGTGC ATACCTTCTACCGGATTCGCCTCGTGCACGCGGAGCGGATTCCGGCGGAAGGGGCGGCAGTGCTCGTGTGCAATCACGTC AGCTACGTCGATGCGCTCGTGCTGGCCGCCGCGAGCCCGCGCCCGATTCGGTTCGTGATGGATCACCGGATCTTCAAGAC GCGTTTCGCGAGCTGGGTATTCCGGCATGCGAAGGCGATCCCGATCGCACCGCGCCACGAGGACCCCGCGATGCTCGCGC GTGCGTACGACCTCTGCGAGGCCGCGCTGAAGGACGGCGAGCTCGTGTGCATCTTCCCCGAGGGCAAGCTGACGAAGACG GGCGACATCAACACGTTCCACCACGGTATCACCGAGATCCTGAGCCGCACGCCGGCGCCGGTGATCCCGATGGCGCTGCG CGGGCTGTGGGGCAGCTATTTTTCGCGGCATTCCGATGCGCGGATGCCACGGCCGATCAAGCGCGGCGTGATGAGCCGGC TGACGCTGGCGGTCGGCGAGCCGATCCCCGCTTCTGTGGCGACGCCCGAGGCGTTGCAGGCGGCGGTGACCGAACTGCGC GGCGCGCGGAAGTAG
Upstream 100 bases:
>100_bases ATCCGGCACGCGGCGGCGCAGGCATGTCCTGCGCCGCCGTTTTTTCAACGACAACACGAGGCCCGCGCAGCATCGCCCAG ACGATGCGCGCGTATTCCGC
Downstream 100 bases:
>100_bases GCGCTGGGCTGCATTGCGCGGTGCCGACACTTAGAGGCCGAGCGGTGCCGCTTGCATGGCCCAAAGAGCGTTTGTCAGGG CTCCTTTGACCGCGGAGCAT
Product: phospholipid/glycerol acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 644; Mature: 643
Protein sequence:
>644_residues MSDHTQATSGRRDERRAHASQFDLLRERRFAPFFTTQFLGALNDNVFKIGFTSLVTYHTARFSGVDAKTAAFLISAIFIL PFVLFSATSGQIADKYDKATLTRFVKSFEIVLMLVGAAGFVTHSATLLYLCTFMMGMHSTLFGPVKYSYLPQHLGEHELV GGNGLVEMGTFIAILIGTIIGGAAAGIEGSGERVLAVSVVVIALAGRLVAQRVPPTPAPQPDLVINWNPVSETWRNLGLA RQNRTVFLSLLGISWLWFVGATFLTSFFNFAKDVLSASPDVVTILLATFSVGIGLGSLLCERLSQRRVEIGLVPLGSIGI SVFAIELYFASHALPSPGHLLSVGEFLAGARHWRILADLFLLAMFGGFYSVPLYALIQSRSAPTHRARIIAANNILNALF MILSAVMAMGLTKAGVDIPGLFLVTALLNVVVATYIYLLVPEFLLRFVAWVLVHTFYRIRLVHAERIPAEGAAVLVCNHV SYVDALVLAAASPRPIRFVMDHRIFKTRFASWVFRHAKAIPIAPRHEDPAMLARAYDLCEAALKDGELVCIFPEGKLTKT GDINTFHHGITEILSRTPAPVIPMALRGLWGSYFSRHSDARMPRPIKRGVMSRLTLAVGEPIPASVATPEALQAAVTELR GARK
Sequences:
>Translated_644_residues MSDHTQATSGRRDERRAHASQFDLLRERRFAPFFTTQFLGALNDNVFKIGFTSLVTYHTARFSGVDAKTAAFLISAIFIL PFVLFSATSGQIADKYDKATLTRFVKSFEIVLMLVGAAGFVTHSATLLYLCTFMMGMHSTLFGPVKYSYLPQHLGEHELV GGNGLVEMGTFIAILIGTIIGGAAAGIEGSGERVLAVSVVVIALAGRLVAQRVPPTPAPQPDLVINWNPVSETWRNLGLA RQNRTVFLSLLGISWLWFVGATFLTSFFNFAKDVLSASPDVVTILLATFSVGIGLGSLLCERLSQRRVEIGLVPLGSIGI SVFAIELYFASHALPSPGHLLSVGEFLAGARHWRILADLFLLAMFGGFYSVPLYALIQSRSAPTHRARIIAANNILNALF MILSAVMAMGLTKAGVDIPGLFLVTALLNVVVATYIYLLVPEFLLRFVAWVLVHTFYRIRLVHAERIPAEGAAVLVCNHV SYVDALVLAAASPRPIRFVMDHRIFKTRFASWVFRHAKAIPIAPRHEDPAMLARAYDLCEAALKDGELVCIFPEGKLTKT GDINTFHHGITEILSRTPAPVIPMALRGLWGSYFSRHSDARMPRPIKRGVMSRLTLAVGEPIPASVATPEALQAAVTELR GARK >Mature_643_residues SDHTQATSGRRDERRAHASQFDLLRERRFAPFFTTQFLGALNDNVFKIGFTSLVTYHTARFSGVDAKTAAFLISAIFILP FVLFSATSGQIADKYDKATLTRFVKSFEIVLMLVGAAGFVTHSATLLYLCTFMMGMHSTLFGPVKYSYLPQHLGEHELVG GNGLVEMGTFIAILIGTIIGGAAAGIEGSGERVLAVSVVVIALAGRLVAQRVPPTPAPQPDLVINWNPVSETWRNLGLAR QNRTVFLSLLGISWLWFVGATFLTSFFNFAKDVLSASPDVVTILLATFSVGIGLGSLLCERLSQRRVEIGLVPLGSIGIS VFAIELYFASHALPSPGHLLSVGEFLAGARHWRILADLFLLAMFGGFYSVPLYALIQSRSAPTHRARIIAANNILNALFM ILSAVMAMGLTKAGVDIPGLFLVTALLNVVVATYIYLLVPEFLLRFVAWVLVHTFYRIRLVHAERIPAEGAAVLVCNHVS YVDALVLAAASPRPIRFVMDHRIFKTRFASWVFRHAKAIPIAPRHEDPAMLARAYDLCEAALKDGELVCIFPEGKLTKTG DINTFHHGITEILSRTPAPVIPMALRGLWGSYFSRHSDARMPRPIKRGVMSRLTLAVGEPIPASVATPEALQAAVTELRG ARK
Specific function: Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. LplT (TC 2.A.1.42) family [H]
Homologues:
Organism=Escherichia coli, GI1789200, Length=330, Percent_Identity=26.6666666666667, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1789201, Length=185, Percent_Identity=29.1891891891892, Blast_Score=62, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 70294; Mature: 70163
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDHTQATSGRRDERRAHASQFDLLRERRFAPFFTTQFLGALNDNVFKIGFTSLVTYHTA CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHH RFSGVDAKTAAFLISAIFILPFVLFSATSGQIADKYDKATLTRFVKSFEIVLMLVGAAGF HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTHSATLLYLCTFMMGMHSTLFGPVKYSYLPQHLGEHELVGGNGLVEMGTFIAILIGTII HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHH GGAAAGIEGSGERVLAVSVVVIALAGRLVAQRVPPTPAPQPDLVINWNPVSETWRNLGLA HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHCCCC RQNRTVFLSLLGISWLWFVGATFLTSFFNFAKDVLSASPDVVTILLATFSVGIGLGSLLC CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH ERLSQRRVEIGLVPLGSIGISVFAIELYFASHALPSPGHLLSVGEFLAGARHWRILADLF HHHHHCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LLAMFGGFYSVPLYALIQSRSAPTHRARIIAANNILNALFMILSAVMAMGLTKAGVDIPG HHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEHHHHHHHHHHHHHHHHHHCCHHCCCCCCH LFLVTALLNVVVATYIYLLVPEFLLRFVAWVLVHTFYRIRLVHAERIPAEGAAVLVCNHV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHH SYVDALVLAAASPRPIRFVMDHRIFKTRFASWVFRHAKAIPIAPRHEDPAMLARAYDLCE HHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH AALKDGELVCIFPEGKLTKTGDINTFHHGITEILSRTPAPVIPMALRGLWGSYFSRHSDA HHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC RMPRPIKRGVMSRLTLAVGEPIPASVATPEALQAAVTELRGARK CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure SDHTQATSGRRDERRAHASQFDLLRERRFAPFFTTQFLGALNDNVFKIGFTSLVTYHTA CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHH RFSGVDAKTAAFLISAIFILPFVLFSATSGQIADKYDKATLTRFVKSFEIVLMLVGAAGF HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTHSATLLYLCTFMMGMHSTLFGPVKYSYLPQHLGEHELVGGNGLVEMGTFIAILIGTII HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHH GGAAAGIEGSGERVLAVSVVVIALAGRLVAQRVPPTPAPQPDLVINWNPVSETWRNLGLA HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHCCCC RQNRTVFLSLLGISWLWFVGATFLTSFFNFAKDVLSASPDVVTILLATFSVGIGLGSLLC CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH ERLSQRRVEIGLVPLGSIGISVFAIELYFASHALPSPGHLLSVGEFLAGARHWRILADLF HHHHHCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LLAMFGGFYSVPLYALIQSRSAPTHRARIIAANNILNALFMILSAVMAMGLTKAGVDIPG HHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEHHHHHHHHHHHHHHHHHHCCHHCCCCCCH LFLVTALLNVVVATYIYLLVPEFLLRFVAWVLVHTFYRIRLVHAERIPAEGAAVLVCNHV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHH SYVDALVLAAASPRPIRFVMDHRIFKTRFASWVFRHAKAIPIAPRHEDPAMLARAYDLCE HHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH AALKDGELVCIFPEGKLTKTGDINTFHHGITEILSRTPAPVIPMALRGLWGSYFSRHSDA HHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC RMPRPIKRGVMSRLTLAVGEPIPASVATPEALQAAVTELRGARK CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA