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The map label for this gene is rbn [C]

Identifier: 116689478

GI number: 116689478

Start: 1609986

End: 1611314

Strand: Direct

Name: rbn [C]

Synonym: Bcen2424_1456

Alternate gene names: 116689478

Gene position: 1609986-1611314 (Clockwise)

Preceding gene: 116689472

Following gene: 116689480

Centisome position: 46.21

GC content: 68.4

Gene sequence:

>1329_bases
TTGCCGAAGTTGAGCGTGGATCTCGTCACCATCAAGCGCCTCGCGCAGTTCGCGGCCCGGCGCAGCGCCGAGGATCGCAT
CCCGCAAGTGGCGGGCAGCCTGACCTTCACGACGCTGCTGGCGCTCGTGCCGCTCCTGACGGTCGCGTTCGCGCTGTTCA
CCGCGTTCCCGATGTTCGCGTCGTTCCAGATCTCGCTGCAGGGGTTCCTCGCGGATCACCTGATGCCCGCGCAGTTCAAC
ATCCAGATCTTCAAGTACCTGAACCAGTTCGCGTCGAAGGCCAAGGGGCTGACCACGGCGGGCCTGATCGTGCTCGTCGT
CACGTCGGTGATGACCATGATGACGATCGAATCGGCGTTCAACCTGATCTGGCGCGTACGCAAGCCGCGGCCGTTCGCGC
AGCGCGTGCTCGCGTACTGGGCGCTGATCACGCTGGGGCCCTTGCTGTTCGGCGTGAGCTTGTCGATCTCGTCGTACCTG
TTCACGCAGTCGCTCGCGTTCACCGGCGCGGGGCCGTCCACGTCGATGGTGGAGTGGCTGCTCGCGCTCGCATCGCTGCC
GTTGACGGTGCTCGCGTTCACGCTGCTGTACGTGTACCTGCCGAACTGCACGGTCGCATGGCGCGACGCGGTGATCGGCG
GGCTCTTCGCGGCCATCGCATTCGAACTCGCGAAGCGCGGCTTCGGCTACTACGTGCGGCGCATTCCGACCTATACGGCC
GTGTACGGCGCGTTCGCGGCGCTGCCGGTGTTCCTGCTGTGGGTGTATTTGAGCTGGTTCATCGCGCTGCTGGGCGCGAT
GGTGGCGTCGGCGCTGCCGGCGATTCGCGTCGGCCAGTTCCACCGCATCCACTATCCGGGCAGCGACCTGCTCGACGCGC
TCGAATTGCTCGCGCGGCTGGCCGAAGCGCGTGCGGCCGGCAAGCGCGGCTACACGGCGCTGCGGCTCGCGACGATGCTG
CGCTGCGACATGGAAACCGCGCAGCGATTGCTGACGACGATGGAGGAGCGGGAATGGGTCGCGCGGCTCGACGGTGGCGG
GGAGACCACGCCGCGCTATATCCTGCTCGCGAACCCGGAGCAGCTGACGCTCGCGCAACTGTTCGACGTGCTGGTGATCG
ATCGCACCGAGCTGACCTACCAACTCCAGCGGCGCCGCAGCCACGTCGACGGGGCCGCGCTGCTCGACGTGCTGTCGAAC
GACCGGTTCGACGTGACGCTCGCATCGCTGATCGCCGCGCACCGGCTCGCGGGCGGGCAGCCGGCCGGCAGCGCCGCACC
GGCGCCGGGCGTCGCCGACGCGCACGCGCAGCCGCCGCGGCCTGCCTGA

Upstream 100 bases:

>100_bases
GCCCCTGCTGGAATCGAGCGGCTATTATAGGGGCTGAAGCCGTCGCGCTGCGCGGCGGCGGCGCGCCGTGACGCGCGTAG
CATCGAGAAGGAGAAGCCGT

Downstream 100 bases:

>100_bases
AGGCGGGGCCGGCGGCTACAGCGGGATCTTGCCGGTGCAGATGTCCTTGAACATCACCCAGTCGCCCATCAGGCTGTAGA
TCGGGTGCCGGAACGTGGCC

Product: putative ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MPKLSVDLVTIKRLAQFAARRSAEDRIPQVAGSLTFTTLLALVPLLTVAFALFTAFPMFASFQISLQGFLADHLMPAQFN
IQIFKYLNQFASKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVRKPRPFAQRVLAYWALITLGPLLFGVSLSISSYL
FTQSLAFTGAGPSTSMVEWLLALASLPLTVLAFTLLYVYLPNCTVAWRDAVIGGLFAAIAFELAKRGFGYYVRRIPTYTA
VYGAFAALPVFLLWVYLSWFIALLGAMVASALPAIRVGQFHRIHYPGSDLLDALELLARLAEARAAGKRGYTALRLATML
RCDMETAQRLLTTMEEREWVARLDGGGETTPRYILLANPEQLTLAQLFDVLVIDRTELTYQLQRRRSHVDGAALLDVLSN
DRFDVTLASLIAAHRLAGGQPAGSAAPAPGVADAHAQPPRPA

Sequences:

>Translated_442_residues
MPKLSVDLVTIKRLAQFAARRSAEDRIPQVAGSLTFTTLLALVPLLTVAFALFTAFPMFASFQISLQGFLADHLMPAQFN
IQIFKYLNQFASKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVRKPRPFAQRVLAYWALITLGPLLFGVSLSISSYL
FTQSLAFTGAGPSTSMVEWLLALASLPLTVLAFTLLYVYLPNCTVAWRDAVIGGLFAAIAFELAKRGFGYYVRRIPTYTA
VYGAFAALPVFLLWVYLSWFIALLGAMVASALPAIRVGQFHRIHYPGSDLLDALELLARLAEARAAGKRGYTALRLATML
RCDMETAQRLLTTMEEREWVARLDGGGETTPRYILLANPEQLTLAQLFDVLVIDRTELTYQLQRRRSHVDGAALLDVLSN
DRFDVTLASLIAAHRLAGGQPAGSAAPAPGVADAHAQPPRPA
>Mature_441_residues
PKLSVDLVTIKRLAQFAARRSAEDRIPQVAGSLTFTTLLALVPLLTVAFALFTAFPMFASFQISLQGFLADHLMPAQFNI
QIFKYLNQFASKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVRKPRPFAQRVLAYWALITLGPLLFGVSLSISSYLF
TQSLAFTGAGPSTSMVEWLLALASLPLTVLAFTLLYVYLPNCTVAWRDAVIGGLFAAIAFELAKRGFGYYVRRIPTYTAV
YGAFAALPVFLLWVYLSWFIALLGAMVASALPAIRVGQFHRIHYPGSDLLDALELLARLAEARAAGKRGYTALRLATMLR
CDMETAQRLLTTMEEREWVARLDGGGETTPRYILLANPEQLTLAQLFDVLVIDRTELTYQLQRRRSHVDGAALLDVLSND
RFDVTLASLIAAHRLAGGQPAGSAAPAPGVADAHAQPPRPA

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

Organism=Escherichia coli, GI1790319, Length=257, Percent_Identity=39.6887159533074, Blast_Score=191, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 48403; Mature: 48272

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PKLSVDLVTIKRLAQFAARRSAEDRIPQVAGSLTFTTLLALVPLLTVAFALFTAFPMFA
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFQISLQGFLADHLMPAQFNIQIFKYLNQFASKAKGLTTAGLIVLVVTSVMTMMTIESAF
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
NLIWRVRKPRPFAQRVLAYWALITLGPLLFGVSLSISSYLFTQSLAFTGAGPSTSMVEWL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LALASLPLTVLAFTLLYVYLPNCTVAWRDAVIGGLFAAIAFELAKRGFGYYVRRIPTYTA
HHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHH
VYGAFAALPVFLLWVYLSWFIALLGAMVASALPAIRVGQFHRIHYPGSDLLDALELLARL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEECCCHHHHHHHHHHHHH
AEARAAGKRGYTALRLATMLRCDMETAQRLLTTMEEREWVARLDGGGETTPRYILLANPE
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCC
QLTLAQLFDVLVIDRTELTYQLQRRRSHVDGAALLDVLSNDRFDVTLASLIAAHRLAGGQ
HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
PAGSAAPAPGVADAHAQPPRPA
CCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA