| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is iolE [H]
Identifier: 116689451
GI number: 116689451
Start: 1577164
End: 1578090
Strand: Direct
Name: iolE [H]
Synonym: Bcen2424_1429
Alternate gene names: 116689451
Gene position: 1577164-1578090 (Clockwise)
Preceding gene: 116689450
Following gene: 116689452
Centisome position: 45.27
GC content: 68.5
Gene sequence:
>927_bases ATGACGATGAAGATTGGCTGCGCGCCGTGTTGCTGGGGCGTCGACGACGTGAAGAACCCGCACCTGCCGCCGTGGCGGCA CGTGCTTGCCGAAGCCGCGCAGGCCGGCTACTCGGGCATCGAGCTCGGGCCGTACGGCTACATCCCGCTCGAACTCGACG TGGTGAGCGCCGAACTCGAACGCCAGCGCCTGAGCATCACGGCCGGTACGATCTTCGACGATCTCGTGTCGCCGGAGAAC CTGCCGAACCTGCTGCGCCAGACGCGCGACATCTGCGCGCTGATCACGCGGTTGCCGAAGCTGCCGACGCAGGACGGCCA GCGCTATGCGGCGCCGTACCTGGTCGTGATGGACTGGGGCCACGAGGAACGCGACTACGCGGCCGGCCACGGCGATCGCG CGCCGCGGCTGTCCGACGAGCGCTGGGCGCGGATGGTCGACCATATCCGGCAGATCGCCACCATCGCGCGCGACGAGTTC GGCGTGCGCGCGGTCATTCATCCGCATGCGGGCGGCTACATCGAGTTCGCGGACGAGATCGACCGGATCGTCGCCGACAT TCCGGCCGACACGGCGGGCCTGTGTCTCGACACCGGCCACCTGCATTACTCGGGCATGGACCCGGAAACGTGGTTGCGCC GCCATGCGGCACGGTTGGACTACGTGCATTTCAAGGATATCGACGCAGCCGTGTACGACGCGGTGATGGGCGAGCACATC GCGTTTTTCGCGGCCTGCGCGCGCGGCGTGATGTGCCCGATCGGCACCGGCGTGCTCGACTACCCGGCGATCCGCCGCGC GCTCGACGACATCGGCTACGCCGGCTACATCACGATCGAACAGGAGCGCGACCCGCGCAACGCCGGCACGAGCCTGCGCG ACGTCGCCGCGAGCCGCGCGTTTCTCGCGTCGGCCGGTTTTGCATGA
Upstream 100 bases:
>100_bases TGCGGGCCCAGCAGAGCGGCGCGGTCGAGCCGATCGCGATGGCCGAGCGTCCCGCGTTCTATCGCGGCTGACCGGTCGCT TACCTGCCGGAGAGACCGAC
Downstream 100 bases:
>100_bases TCCCCTGAACACGCACCAGGAACACCACCATCATGATTGACGGACAGATTCTGCTTGGCCATTCGATTCGCTGGGGCATG GTCGGCGGCGGGCTCGGCAG
Product: xylose isomerase domain-containing protein
Products: NA
Alternate protein names: 2-keto-myo-inositol dehydratase; 2KMI dehydratase [H]
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MTMKIGCAPCCWGVDDVKNPHLPPWRHVLAEAAQAGYSGIELGPYGYIPLELDVVSAELERQRLSITAGTIFDDLVSPEN LPNLLRQTRDICALITRLPKLPTQDGQRYAAPYLVVMDWGHEERDYAAGHGDRAPRLSDERWARMVDHIRQIATIARDEF GVRAVIHPHAGGYIEFADEIDRIVADIPADTAGLCLDTGHLHYSGMDPETWLRRHAARLDYVHFKDIDAAVYDAVMGEHI AFFAACARGVMCPIGTGVLDYPAIRRALDDIGYAGYITIEQERDPRNAGTSLRDVAASRAFLASAGFA
Sequences:
>Translated_308_residues MTMKIGCAPCCWGVDDVKNPHLPPWRHVLAEAAQAGYSGIELGPYGYIPLELDVVSAELERQRLSITAGTIFDDLVSPEN LPNLLRQTRDICALITRLPKLPTQDGQRYAAPYLVVMDWGHEERDYAAGHGDRAPRLSDERWARMVDHIRQIATIARDEF GVRAVIHPHAGGYIEFADEIDRIVADIPADTAGLCLDTGHLHYSGMDPETWLRRHAARLDYVHFKDIDAAVYDAVMGEHI AFFAACARGVMCPIGTGVLDYPAIRRALDDIGYAGYITIEQERDPRNAGTSLRDVAASRAFLASAGFA >Mature_307_residues TMKIGCAPCCWGVDDVKNPHLPPWRHVLAEAAQAGYSGIELGPYGYIPLELDVVSAELERQRLSITAGTIFDDLVSPENL PNLLRQTRDICALITRLPKLPTQDGQRYAAPYLVVMDWGHEERDYAAGHGDRAPRLSDERWARMVDHIRQIATIARDEFG VRAVIHPHAGGYIEFADEIDRIVADIPADTAGLCLDTGHLHYSGMDPETWLRRHAARLDYVHFKDIDAAVYDAVMGEHIA FFAACARGVMCPIGTGVLDYPAIRRALDDIGYAGYITIEQERDPRNAGTSLRDVAASRAFLASAGFA
Specific function: Catalyzes the dehydration of inosose (2-keto-myo- inositol, 2KMI or 2,4,6/3,5-pentahydroxycyclohexanone) to 3D- (3,5/4)-trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi- inositol) [H]
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iolE/mocC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: =4.2.1.44 [H]
Molecular weight: Translated: 34039; Mature: 33908
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMKIGCAPCCWGVDDVKNPHLPPWRHVLAEAAQAGYSGIELGPYGYIPLELDVVSAELE CCEECCCCCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCEECCCCEEEEEEEHHHHHHH RQRLSITAGTIFDDLVSPENLPNLLRQTRDICALITRLPKLPTQDGQRYAAPYLVVMDWG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCEEEEEECC HEERDYAAGHGDRAPRLSDERWARMVDHIRQIATIARDEFGVRAVIHPHAGGYIEFADEI CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEHHHHH DRIVADIPADTAGLCLDTGHLHYSGMDPETWLRRHAARLDYVHFKDIDAAVYDAVMGEHI HHHHHHCCCCCCCEEEECCCEEECCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHH AFFAACARGVMCPIGTGVLDYPAIRRALDDIGYAGYITIEQERDPRNAGTSLRDVAASRA HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHH FLASAGFA HHHHCCCC >Mature Secondary Structure TMKIGCAPCCWGVDDVKNPHLPPWRHVLAEAAQAGYSGIELGPYGYIPLELDVVSAELE CEECCCCCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCEECCCCEEEEEEEHHHHHHH RQRLSITAGTIFDDLVSPENLPNLLRQTRDICALITRLPKLPTQDGQRYAAPYLVVMDWG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCEEEEEECC HEERDYAAGHGDRAPRLSDERWARMVDHIRQIATIARDEFGVRAVIHPHAGGYIEFADEI CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEHHHHH DRIVADIPADTAGLCLDTGHLHYSGMDPETWLRRHAARLDYVHFKDIDAAVYDAVMGEHI HHHHHHCCCCCCCEEEECCCEEECCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHH AFFAACARGVMCPIGTGVLDYPAIRRALDDIGYAGYITIEQERDPRNAGTSLRDVAASRA HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHH FLASAGFA HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA