Click here to switch to the map view.

The map label for this gene is 116689346

Identifier: 116689346

GI number: 116689346

Start: 1457838

End: 1458197

Strand: Reverse

Name: 116689346

Synonym: Bcen2424_1324

Alternate gene names: NA

Gene position: 1458197-1457838 (Counterclockwise)

Preceding gene: 116689347

Following gene: 116689345

Centisome position: 41.86

GC content: 64.17

Gene sequence:

>360_bases
ATGCCATCGGCGGGGAGGCATAACATGCCCCGCACTTTTTTCAATCGTGACTGCGTGCCGCCCGTTGTGGAAGTGCTGGC
GCGTCTCCAATTGCAACCGTCGAAGCCGAACGGCGCGGGCTACGCGCAAGTTCGTTGCCCCATTCACGGTGAGAACCACG
CGAGCTTGTCGATTCACTTCGAGCGCGGCAATTGGCGCTGTTTCGCTTGCGGCGAGGCCGGCGGCGACGCGCTCGAACTG
TACCGCCGTGCGCGCGGCTTGTCGTTTGCACAAGCGGCACGCGAACTCGACGCGCTGGCGACCGTCGCGAATATCGCGCG
TGCGCTCGACTACTCGCTGAACGCAGGGGGTGAAGCGTGA

Upstream 100 bases:

>100_bases
CCGCCGCTTGGCATGGAAAATCGCCGACATCCAGGCATTGCTTGACGGGAGCCTGCAATGAACAACGGCGCATTGAATTT
GTTCGACGGCGCTCATCGCA

Downstream 100 bases:

>100_bases
GCGCAGCCGATACGCTCGGCCGCCCCGAAGACGCGCGCCCGGAGCGGGAAGCCGCGTCTGCACTCGAAGCCGACGCGCGC
ATGTTCGATGAATTGCGCCG

Product: zinc finger, CHC2-family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MPSAGRHNMPRTFFNRDCVPPVVEVLARLQLQPSKPNGAGYAQVRCPIHGENHASLSIHFERGNWRCFACGEAGGDALEL
YRRARGLSFAQAARELDALATVANIARALDYSLNAGGEA

Sequences:

>Translated_119_residues
MPSAGRHNMPRTFFNRDCVPPVVEVLARLQLQPSKPNGAGYAQVRCPIHGENHASLSIHFERGNWRCFACGEAGGDALEL
YRRARGLSFAQAARELDALATVANIARALDYSLNAGGEA
>Mature_118_residues
PSAGRHNMPRTFFNRDCVPPVVEVLARLQLQPSKPNGAGYAQVRCPIHGENHASLSIHFERGNWRCFACGEAGGDALELY
RRARGLSFAQAARELDALATVANIARALDYSLNAGGEA

Specific function: Unknown

COG id: COG0358

COG function: function code L; DNA primase (bacterial type)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12893; Mature: 12761

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSAGRHNMPRTFFNRDCVPPVVEVLARLQLQPSKPNGAGYAQVRCPIHGENHASLSIHF
CCCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEEEEE
ERGNWRCFACGEAGGDALELYRRARGLSFAQAARELDALATVANIARALDYSLNAGGEA
ECCCEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PSAGRHNMPRTFFNRDCVPPVVEVLARLQLQPSKPNGAGYAQVRCPIHGENHASLSIHF
CCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEEEEE
ERGNWRCFACGEAGGDALELYRRARGLSFAQAARELDALATVANIARALDYSLNAGGEA
ECCCEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA