The gene/protein map for NC_008542 is currently unavailable.
Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689343

Identifier: 116689343

GI number: 116689343

Start: 1453012

End: 1454283

Strand: Reverse

Name: 116689343

Synonym: Bcen2424_1321

Alternate gene names: NA

Gene position: 1454283-1453012 (Counterclockwise)

Preceding gene: 116689344

Following gene: 116689342

Centisome position: 41.74

GC content: 45.52

Gene sequence:

>1272_bases
ATGTATTCAAAAACAAAAGTTGACCGCGCGGGCCTAGCGCTCGCCAAAGACAAATATCGCGACGAGAATGAATACTTCGA
GCTAGAGGAGGTATTTGACGAATACCGCAAGGCGCACTTGCAACCGTTGTCTGAGACGACTCTCGAACTCCAGCACCTTC
TATCCAACTACGGTGCCCAATACTACATCGCTCAGCGCCTTAAGCGAAAACCGCAAATCATCCGAAAACTCAATAGATTG
AGCGTGCGTCTAACGCAGCTACAAGACATCGGCGGGTGTCGCATCATCGTCCAAAAGAACTCAGACGTTGACAGAATCCA
TAAGTACCTAATTGATAAGGTAAATTCACAAAATGTATTTACTATCGATAGAACGACGGACTATCGAGATCTTGGTCGAG
ATTATACGGGATACCGTTCCCTTCACGTGATTTTGAAACGCGGCGGAGTACATCTGGAGCTTCAAATTCGGAGCAGAATT
CAACATTATTGGTCGGAAAGTATCGAGCGTACGTCTGTTATCTATGGCTATCACCTCAAGGAAGGCGAAGGCGATGAGCG
GGTCATTGGATACTTTAAAAACTTGTCCGATGTTTTCTATGAGATTGAGGCAGGGCGCGAGCCTTCCATTGATAAACGCC
TGAAAGTAGATGAGCTTCGAGGTGAATGCGAGCAACTCATCGAACAGTCCGATCGATACAAAGTATTTGACAGCTTCGTC
AATGAGGACATTATCAAAACCCTAACCGAGAAGGAAAGCAAGAATTCGGGGGGGCTCAATAATTGGATTCTCGTTTTTGA
CTGGAATGCCGGGGCTTTCGTTAGCTGGGACATTGTTAGTCGAAATCCGAATGACGCCGTTGAAACTTACATCGAGTACG
AAAAAATGTTTCCCGTCGAGTCGGGATATGAGGTGGTGCTCGTTGGGTCATCTGAGGTGGCCACTGTTAGACAGACTCAT
AGCCATTACTTTGGCATCGAGAGCTATCATAATATTCTCGAGAGTTTGGACACATCCATCGTCGGATTCAGTAGAAAAAT
TGACATCGATATCGGTGCTAGACAAATTTTGTCGACTCTGCACCGACGCCGTTTTTGGGGAAAGAAAACAGTTTCTGTGG
ATACGTTGAGCAATCATTTCTGCAAGAGTGTACTTACGTTTGAGTCATCGCTTCGGTCTCTTCAGGAGCGTCAATTGGTA
CAGGTATCGTCGTTGAATGGCGGGATCTCTCTCAATATTCACAAGAAGTCTGAAATTGAACAGTATGTATAA

Upstream 100 bases:

>100_bases
CTGTCAACTCATTCCCAAAAGTGCAACACTGAAAAAGGCCGAAGTCCGATCCGAACACAGAGGCCAAACACAGACCATCG
CAAATACTTCGACTAAGTCT

Downstream 100 bases:

>100_bases
CGGGACCGCTCCTCGATAACGCGCAGGACCCGCCGTAAGGGGCCGTACGCCCGTCCAATCACTGATGACGTGATTTACAT
AATCCGAGCGCGAAGGTTCG

Product: RelA/SpoT domain-containing protein

Products: NA

Alternate protein names: RelA/SpoT Domain-Containing Protein; Stringent Response Modulating PpGpp Metabolism Protein; RelA/SpoT; GTP Pyrophosphokinase; Rela/Spot Domain Protein

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MYSKTKVDRAGLALAKDKYRDENEYFELEEVFDEYRKAHLQPLSETTLELQHLLSNYGAQYYIAQRLKRKPQIIRKLNRL
SVRLTQLQDIGGCRIIVQKNSDVDRIHKYLIDKVNSQNVFTIDRTTDYRDLGRDYTGYRSLHVILKRGGVHLELQIRSRI
QHYWSESIERTSVIYGYHLKEGEGDERVIGYFKNLSDVFYEIEAGREPSIDKRLKVDELRGECEQLIEQSDRYKVFDSFV
NEDIIKTLTEKESKNSGGLNNWILVFDWNAGAFVSWDIVSRNPNDAVETYIEYEKMFPVESGYEVVLVGSSEVATVRQTH
SHYFGIESYHNILESLDTSIVGFSRKIDIDIGARQILSTLHRRRFWGKKTVSVDTLSNHFCKSVLTFESSLRSLQERQLV
QVSSLNGGISLNIHKKSEIEQYV

Sequences:

>Translated_423_residues
MYSKTKVDRAGLALAKDKYRDENEYFELEEVFDEYRKAHLQPLSETTLELQHLLSNYGAQYYIAQRLKRKPQIIRKLNRL
SVRLTQLQDIGGCRIIVQKNSDVDRIHKYLIDKVNSQNVFTIDRTTDYRDLGRDYTGYRSLHVILKRGGVHLELQIRSRI
QHYWSESIERTSVIYGYHLKEGEGDERVIGYFKNLSDVFYEIEAGREPSIDKRLKVDELRGECEQLIEQSDRYKVFDSFV
NEDIIKTLTEKESKNSGGLNNWILVFDWNAGAFVSWDIVSRNPNDAVETYIEYEKMFPVESGYEVVLVGSSEVATVRQTH
SHYFGIESYHNILESLDTSIVGFSRKIDIDIGARQILSTLHRRRFWGKKTVSVDTLSNHFCKSVLTFESSLRSLQERQLV
QVSSLNGGISLNIHKKSEIEQYV
>Mature_423_residues
MYSKTKVDRAGLALAKDKYRDENEYFELEEVFDEYRKAHLQPLSETTLELQHLLSNYGAQYYIAQRLKRKPQIIRKLNRL
SVRLTQLQDIGGCRIIVQKNSDVDRIHKYLIDKVNSQNVFTIDRTTDYRDLGRDYTGYRSLHVILKRGGVHLELQIRSRI
QHYWSESIERTSVIYGYHLKEGEGDERVIGYFKNLSDVFYEIEAGREPSIDKRLKVDELRGECEQLIEQSDRYKVFDSFV
NEDIIKTLTEKESKNSGGLNNWILVFDWNAGAFVSWDIVSRNPNDAVETYIEYEKMFPVESGYEVVLVGSSEVATVRQTH
SHYFGIESYHNILESLDTSIVGFSRKIDIDIGARQILSTLHRRRFWGKKTVSVDTLSNHFCKSVLTFESSLRSLQERQLV
QVSSLNGGISLNIHKKSEIEQYV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49280; Mature: 49280

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSKTKVDRAGLALAKDKYRDENEYFELEEVFDEYRKAHLQPLSETTLELQHLLSNYGAQ
CCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCH
YYIAQRLKRKPQIIRKLNRLSVRLTQLQDIGGCRIIVQKNSDVDRIHKYLIDKVNSQNVF
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEE
TIDRTTDYRDLGRDYTGYRSLHVILKRGGVHLELQIRSRIQHYWSESIERTSVIYGYHLK
EEECCCCHHHHCCCCCCHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCEEEEEEEEC
EGEGDERVIGYFKNLSDVFYEIEAGREPSIDKRLKVDELRGECEQLIEQSDRYKVFDSFV
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
NEDIIKTLTEKESKNSGGLNNWILVFDWNAGAFVSWDIVSRNPNDAVETYIEYEKMFPVE
HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCC
SGYEVVLVGSSEVATVRQTHSHYFGIESYHNILESLDTSIVGFSRKIDIDIGARQILSTL
CCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHH
HRRRFWGKKTVSVDTLSNHFCKSVLTFESSLRSLQERQLVQVSSLNGGISLNIHKKSEIE
HHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHH
QYV
HCC
>Mature Secondary Structure
MYSKTKVDRAGLALAKDKYRDENEYFELEEVFDEYRKAHLQPLSETTLELQHLLSNYGAQ
CCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCH
YYIAQRLKRKPQIIRKLNRLSVRLTQLQDIGGCRIIVQKNSDVDRIHKYLIDKVNSQNVF
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEE
TIDRTTDYRDLGRDYTGYRSLHVILKRGGVHLELQIRSRIQHYWSESIERTSVIYGYHLK
EEECCCCHHHHCCCCCCHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCEEEEEEEEC
EGEGDERVIGYFKNLSDVFYEIEAGREPSIDKRLKVDELRGECEQLIEQSDRYKVFDSFV
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
NEDIIKTLTEKESKNSGGLNNWILVFDWNAGAFVSWDIVSRNPNDAVETYIEYEKMFPVE
HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCC
SGYEVVLVGSSEVATVRQTHSHYFGIESYHNILESLDTSIVGFSRKIDIDIGARQILSTL
CCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHH
HRRRFWGKKTVSVDTLSNHFCKSVLTFESSLRSLQERQLVQVSSLNGGISLNIHKKSEIE
HHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHH
QYV
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA