Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is pgl [H]
Identifier: 116624358
GI number: 116624358
Start: 6616156
End: 6616881
Strand: Reverse
Name: pgl [H]
Synonym: Acid_5279
Alternate gene names: 116624358
Gene position: 6616881-6616156 (Counterclockwise)
Preceding gene: 116624359
Following gene: 116624355
Centisome position: 66.4
GC content: 62.95
Gene sequence:
>726_bases ATGAGCGCTCACTGGCAGAAACTTCCGGACGCGCAGGCAGCCGCCGAGGCGTGCGCACATCACATTATCGGCCGGCTCGA CGAAGCCATCTCGGGGCAGGAGTTCGCCTCTTTCGCGATCTCCGGAGGGTCCAGCCCCAAACCGATGTTCCATATTCTGG CTGCGACGAATTTCCCTTGGGACAGGGTGCACATCTTCTGGGTGGACGAGCGCTGCGTGCCGCCCACGGACGATGCCAGC AATTACAAGATGGCGATGGAATATCTGATTAAGCCGGCGCACATTCCGCAGCGCAACGTGCATCGCGTGTTCGGAGAGTT GGCACCGCCGGCGGCGGCCAAGCGCTACGTCGAGGAGATCCGGGAGTTCTTTGGGCTGGCGGAAGGGGAACTGCCGCGCT TCGACCTTGTTCATCGCGGGATGGGACCCGACGCGCACACCGCCAGCCTCTTTCCGGGCGAGCCGCTGATTGACGACCGC GAGGGAATCGCGGCGCCGGTATATGTCGAGAAGTTCCATCAATGGCGCGTGACGCTGCTGCCCGGCGTCCTGCTGGCGGC GAAGCACACGGTCTTCCTGGCGGTGGGCGAGGATAAGACCGACGCTGTGCGCGCGGTGTTCAAGGAAGAATACGATCCCA AGAAATATCCCGCTCAGATCGCCTCGCACCACGGCCGCGGCGTGATGTGGTTTATGGATGAGCCGGCGGCACGGTTGCTG GATTGA
Upstream 100 bases:
>100_bases AGGAGCTGGGCATCGTAAGCCGCGACGTGGTGTTCGAGCGGACGCTGGCGTCGGCGGCACGTCTTGCGGTACCGTCAGCG GAGCATCCACCGGAAAAACC
Downstream 100 bases:
>100_bases AGCAACGAGCCGCGACGGTGAGGGAGCGTTACGGCAGCGCTCCCTCTCACCTCACGGTCGCGGCTTCCATGAGAAGGCCC CCCTCTGTCAAGAAAATAAT
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MSAHWQKLPDAQAAAEACAHHIIGRLDEAISGQEFASFAISGGSSPKPMFHILAATNFPWDRVHIFWVDERCVPPTDDAS NYKMAMEYLIKPAHIPQRNVHRVFGELAPPAAAKRYVEEIREFFGLAEGELPRFDLVHRGMGPDAHTASLFPGEPLIDDR EGIAAPVYVEKFHQWRVTLLPGVLLAAKHTVFLAVGEDKTDAVRAVFKEEYDPKKYPAQIASHHGRGVMWFMDEPAARLL D
Sequences:
>Translated_241_residues MSAHWQKLPDAQAAAEACAHHIIGRLDEAISGQEFASFAISGGSSPKPMFHILAATNFPWDRVHIFWVDERCVPPTDDAS NYKMAMEYLIKPAHIPQRNVHRVFGELAPPAAAKRYVEEIREFFGLAEGELPRFDLVHRGMGPDAHTASLFPGEPLIDDR EGIAAPVYVEKFHQWRVTLLPGVLLAAKHTVFLAVGEDKTDAVRAVFKEEYDPKKYPAQIASHHGRGVMWFMDEPAARLL D >Mature_240_residues SAHWQKLPDAQAAAEACAHHIIGRLDEAISGQEFASFAISGGSSPKPMFHILAATNFPWDRVHIFWVDERCVPPTDDASN YKMAMEYLIKPAHIPQRNVHRVFGELAPPAAAKRYVEEIREFFGLAEGELPRFDLVHRGMGPDAHTASLFPGEPLIDDRE GIAAPVYVEKFHQWRVTLLPGVLLAAKHTVFLAVGEDKTDAVRAVFKEEYDPKKYPAQIASHHGRGVMWFMDEPAARLLD
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI6912586, Length=176, Percent_Identity=38.0681818181818, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI52145310, Length=206, Percent_Identity=33.495145631068, Blast_Score=104, Evalue=8e-23, Organism=Caenorhabditis elegans, GI115533058, Length=219, Percent_Identity=30.1369863013699, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI115533060, Length=219, Percent_Identity=30.1369863013699, Blast_Score=77, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6321957, Length=227, Percent_Identity=29.9559471365639, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6324362, Length=214, Percent_Identity=29.4392523364486, Blast_Score=65, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6319918, Length=211, Percent_Identity=30.8056872037915, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI24641119, Length=194, Percent_Identity=28.3505154639175, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 - InterPro: IPR006148 [H]
Pfam domain/function: PF01182 Glucosamine_iso [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 26959; Mature: 26828
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAHWQKLPDAQAAAEACAHHIIGRLDEAISGQEFASFAISGGSSPKPMFHILAATNFPW CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHEECCCCCCCCEEEEEEECCCCC DRVHIFWVDERCVPPTDDASNYKMAMEYLIKPAHIPQRNVHRVFGELAPPAAAKRYVEEI CEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH REFFGLAEGELPRFDLVHRGMGPDAHTASLFPGEPLIDDREGIAAPVYVEKFHQWRVTLL HHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH PGVLLAAKHTVFLAVGEDKTDAVRAVFKEEYDPKKYPAQIASHHGRGVMWFMDEPAARLL HHHHHHHCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCHHHHC D C >Mature Secondary Structure SAHWQKLPDAQAAAEACAHHIIGRLDEAISGQEFASFAISGGSSPKPMFHILAATNFPW CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHEECCCCCCCCEEEEEEECCCCC DRVHIFWVDERCVPPTDDASNYKMAMEYLIKPAHIPQRNVHRVFGELAPPAAAKRYVEEI CEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH REFFGLAEGELPRFDLVHRGMGPDAHTASLFPGEPLIDDREGIAAPVYVEKFHQWRVTLL HHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH PGVLLAAKHTVFLAVGEDKTDAVRAVFKEEYDPKKYPAQIASHHGRGVMWFMDEPAARLL HHHHHHHCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCHHHHC D C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]