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The map label for this gene is 116624274

Identifier: 116624274

GI number: 116624274

Start: 6519958

End: 6521364

Strand: Reverse

Name: 116624274

Synonym: Acid_5192

Alternate gene names: NA

Gene position: 6521364-6519958 (Counterclockwise)

Preceding gene: 116624275

Following gene: 116624273

Centisome position: 65.44

GC content: 60.13

Gene sequence:

>1407_bases
ATGAGATGGCAGCCTGACCCAACGTTTTATCCCTCGCCAAAGATGGCGATGGAAGCGCCGGCCGAGAAGCTGGCATATGT
GGCGATGTTAAACCCCAACGTGAAGAAGGGACCGGATGCAATGGCGGTGATCGATGTGGATGCAGAGTCGAAATCGTACG
GCCACATGGTCGGCCGCGCGGATATGCCGAACGCGGGCGACGAACTGCATCATTTCGGCTGGAATGCCTGCAGTTCCTGT
CTGTGCCCCTATTCGCCGCATCCACACATGGAGCGCCGCTACCTGGTGGTGCCGGGCCTGCGCTCGTCGCGCATCCATAT
TCTGGACACGAAGCCGGATCCGAAGAATCCGAAGCTGGTGAAGGTGATCGAGCCGGAGACGGTCATGAACAGGACCGGCT
ACAGCCGTCCTCACACGGTTCACTGCGGACCTGAGGGCATTTACATGAATGCACTGGGTTCGCCTAACGGAGAAGGTCCG
GGCGGCGTCTTCGTTCTGGACGGGGAGACGTTCGACGTGCGAGGGCGCTGGGAACTGGACCGGGGTCCTCAATACCTGGC
GTACGATTTCGCCTGGCATCTGGGACACGACTCCATGATCACCAGCGAATGGGGCACGCCGAATATGTTCGAAGAGGGAT
TGAATGCCGAATTGCTGGTGGGTGGAAAATATGGCCATCAGATTCACGTCTGGGATCTGCAGAAGCGCAAGCACAAACAG
GTTCTGGATCTGGGAGCGGAGCAGCAACTGGTGTTCGAACTCCGGCCCGCAAGAAATCCCACGAAGGCGTACGGCTTCGT
CGGCGTGGTGGTCTCACTGAAGGACCTCTCGTCATCGATCTGGGTCTGGTACCAGGATGGCCGCGCGACGGATACGGCGT
GGAAGATCCGGAAGGTGATCGAGATTCCCGCCGAGCCGGCCAATCCGGAACTGTTGCCTCCGATGCTGAAGGGCTTTGGG
GCGGTCCCGCCGTTCGTCACCGATATCAACCTTTCGCTGGACGACAAATATCTCTACGTCTCCTGCTGGGGCTCCGGCGA
ATTCCGGCAGTACGACGTGAGCGATCCGTTCCATCCGAAGTTGAACAGCAAGGTTCAGATGGGAGGCATCGCGCGGCGTG
CTGCGCATCCTTCGAACCCTGGCACGCCCCTGAACGGCGGTCCCCAGATGGTGGAATTGAGCCGCGACGGCCGGCGCGTG
TACGTGACCAATTCGCTGTACAACGCGGTGGACGATCAGATCTATCCGGACGGCATCAAGGGCTGGATGATGAAGATGGA
TGTGGATTCGAACACCGGCGCGATGCGGGTCGATCCACGCTTCTTCCCGCAGTTTGACGGGATGCGGCCGCACCAGACCC
GGCTGGAGGGCGGCGACGCTTCCTCCGACTCGTACTGCTACGCGTAA

Upstream 100 bases:

>100_bases
AAATCCTAACTACCCACCGCTCGCTGACGCGCGCGGCTCGGACAGTTCGTGAAATGCACAAGACTAGGCGAACCCAGACT
ACAAGAGGAGATCTCTACCC

Downstream 100 bases:

>100_bases
GGAGCCGCGATCTATGGGAACTACATCGACGTCTCTGCTTGCATTGGCGGGATTGGGGGCCTTTCACGGACTCAATCCCG
GGATGGGGTGGCTCTTCGCC

Product: selenium-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MRWQPDPTFYPSPKMAMEAPAEKLAYVAMLNPNVKKGPDAMAVIDVDAESKSYGHMVGRADMPNAGDELHHFGWNACSSC
LCPYSPHPHMERRYLVVPGLRSSRIHILDTKPDPKNPKLVKVIEPETVMNRTGYSRPHTVHCGPEGIYMNALGSPNGEGP
GGVFVLDGETFDVRGRWELDRGPQYLAYDFAWHLGHDSMITSEWGTPNMFEEGLNAELLVGGKYGHQIHVWDLQKRKHKQ
VLDLGAEQQLVFELRPARNPTKAYGFVGVVVSLKDLSSSIWVWYQDGRATDTAWKIRKVIEIPAEPANPELLPPMLKGFG
AVPPFVTDINLSLDDKYLYVSCWGSGEFRQYDVSDPFHPKLNSKVQMGGIARRAAHPSNPGTPLNGGPQMVELSRDGRRV
YVTNSLYNAVDDQIYPDGIKGWMMKMDVDSNTGAMRVDPRFFPQFDGMRPHQTRLEGGDASSDSYCYA

Sequences:

>Translated_468_residues
MRWQPDPTFYPSPKMAMEAPAEKLAYVAMLNPNVKKGPDAMAVIDVDAESKSYGHMVGRADMPNAGDELHHFGWNACSSC
LCPYSPHPHMERRYLVVPGLRSSRIHILDTKPDPKNPKLVKVIEPETVMNRTGYSRPHTVHCGPEGIYMNALGSPNGEGP
GGVFVLDGETFDVRGRWELDRGPQYLAYDFAWHLGHDSMITSEWGTPNMFEEGLNAELLVGGKYGHQIHVWDLQKRKHKQ
VLDLGAEQQLVFELRPARNPTKAYGFVGVVVSLKDLSSSIWVWYQDGRATDTAWKIRKVIEIPAEPANPELLPPMLKGFG
AVPPFVTDINLSLDDKYLYVSCWGSGEFRQYDVSDPFHPKLNSKVQMGGIARRAAHPSNPGTPLNGGPQMVELSRDGRRV
YVTNSLYNAVDDQIYPDGIKGWMMKMDVDSNTGAMRVDPRFFPQFDGMRPHQTRLEGGDASSDSYCYA
>Mature_468_residues
MRWQPDPTFYPSPKMAMEAPAEKLAYVAMLNPNVKKGPDAMAVIDVDAESKSYGHMVGRADMPNAGDELHHFGWNACSSC
LCPYSPHPHMERRYLVVPGLRSSRIHILDTKPDPKNPKLVKVIEPETVMNRTGYSRPHTVHCGPEGIYMNALGSPNGEGP
GGVFVLDGETFDVRGRWELDRGPQYLAYDFAWHLGHDSMITSEWGTPNMFEEGLNAELLVGGKYGHQIHVWDLQKRKHKQ
VLDLGAEQQLVFELRPARNPTKAYGFVGVVVSLKDLSSSIWVWYQDGRATDTAWKIRKVIEIPAEPANPELLPPMLKGFG
AVPPFVTDINLSLDDKYLYVSCWGSGEFRQYDVSDPFHPKLNSKVQMGGIARRAAHPSNPGTPLNGGPQMVELSRDGRRV
YVTNSLYNAVDDQIYPDGIKGWMMKMDVDSNTGAMRVDPRFFPQFDGMRPHQTRLEGGDASSDSYCYA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI16306550, Length=481, Percent_Identity=39.0852390852391, Blast_Score=321, Evalue=1e-87,
Organism=Caenorhabditis elegans, GI17543050, Length=480, Percent_Identity=36.0416666666667, Blast_Score=285, Evalue=3e-77,
Organism=Caenorhabditis elegans, GI17563122, Length=461, Percent_Identity=25.8134490238612, Blast_Score=142, Evalue=5e-34,
Organism=Caenorhabditis elegans, GI17540410, Length=111, Percent_Identity=43.2432432432432, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24646469, Length=485, Percent_Identity=34.020618556701, Blast_Score=257, Evalue=1e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52351; Mature: 52351

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWQPDPTFYPSPKMAMEAPAEKLAYVAMLNPNVKKGPDAMAVIDVDAESKSYGHMVGRA
CCCCCCCCCCCCCCHHHHCCHHHEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCEECCC
DMPNAGDELHHFGWNACSSCLCPYSPHPHMERRYLVVPGLRSSRIHILDTKPDPKNPKLV
CCCCCCCHHHHCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCEE
KVIEPETVMNRTGYSRPHTVHCGPEGIYMNALGSPNGEGPGGVFVLDGETFDVRGRWELD
EEECCHHHHHCCCCCCCCEEEECCCCEEEEECCCCCCCCCCEEEEECCCEEEECEEEECC
RGPQYLAYDFAWHLGHDSMITSEWGTPNMFEEGLNAELLVGGKYGHQIHVWDLQKRKHKQ
CCCCEEEEEEEEECCCCCEEECCCCCCHHHHHCCCEEEEEECCCCCEEEEEECHHHHHHH
VLDLGAEQQLVFELRPARNPTKAYGFVGVVVSLKDLSSSIWVWYQDGRATDTAWKIRKVI
HHHCCCCCEEEEEEECCCCCCHHHEEEEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHE
EIPAEPANPELLPPMLKGFGAVPPFVTDINLSLDDKYLYVSCWGSGEFRQYDVSDPFHPK
ECCCCCCCCCCCCHHHHHCCCCCCEEEEEEEEECCCEEEEEEECCCCEEEECCCCCCCCC
LNSKVQMGGIARRAAHPSNPGTPLNGGPQMVELSRDGRRVYVTNSLYNAVDDQIYPDGIK
CCCEEEECCHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEECHHHHHHCCCCCCCCCC
GWMMKMDVDSNTGAMRVDPRFFPQFDGMRPHQTRLEGGDASSDSYCYA
EEEEEEEECCCCCEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCEECC
>Mature Secondary Structure
MRWQPDPTFYPSPKMAMEAPAEKLAYVAMLNPNVKKGPDAMAVIDVDAESKSYGHMVGRA
CCCCCCCCCCCCCCHHHHCCHHHEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCEECCC
DMPNAGDELHHFGWNACSSCLCPYSPHPHMERRYLVVPGLRSSRIHILDTKPDPKNPKLV
CCCCCCCHHHHCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCEE
KVIEPETVMNRTGYSRPHTVHCGPEGIYMNALGSPNGEGPGGVFVLDGETFDVRGRWELD
EEECCHHHHHCCCCCCCCEEEECCCCEEEEECCCCCCCCCCEEEEECCCEEEECEEEECC
RGPQYLAYDFAWHLGHDSMITSEWGTPNMFEEGLNAELLVGGKYGHQIHVWDLQKRKHKQ
CCCCEEEEEEEEECCCCCEEECCCCCCHHHHHCCCEEEEEECCCCCEEEEEECHHHHHHH
VLDLGAEQQLVFELRPARNPTKAYGFVGVVVSLKDLSSSIWVWYQDGRATDTAWKIRKVI
HHHCCCCCEEEEEEECCCCCCHHHEEEEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHE
EIPAEPANPELLPPMLKGFGAVPPFVTDINLSLDDKYLYVSCWGSGEFRQYDVSDPFHPK
ECCCCCCCCCCCCHHHHHCCCCCCEEEEEEEEECCCEEEEEEECCCCEEEECCCCCCCCC
LNSKVQMGGIARRAAHPSNPGTPLNGGPQMVELSRDGRRVYVTNSLYNAVDDQIYPDGIK
CCCEEEECCHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEECHHHHHHCCCCCCCCCC
GWMMKMDVDSNTGAMRVDPRFFPQFDGMRPHQTRLEGGDASSDSYCYA
EEEEEEEECCCCCEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA