Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is kbl [C]
Identifier: 116624248
GI number: 116624248
Start: 6490792
End: 6491982
Strand: Reverse
Name: kbl [C]
Synonym: Acid_5166
Alternate gene names: 116624248
Gene position: 6491982-6490792 (Counterclockwise)
Preceding gene: 116624249
Following gene: 116624247
Centisome position: 65.14
GC content: 64.15
Gene sequence:
>1191_bases ATGTCCAATCCGCTGTCCTATCTTCATGATCAGCTGGAAGCCTGGCGCGCCGAGGGCACCTATCAGCGCCTGCGCATTCT GCAATCGGCGAGCGCGGCCGAGGCAGAATTCGACGGCAAGCAGGTGATCAATCTCGCCTCCAACAACTACCTTGGCCTGA CGACTCATCCGAAGCTCCGCGAAGCTGCGTTGGAAGCAGTGCGCAAGTACGGCGTGGGGTCGGGCGCGGTGCGTACCATC TCCGGCACCATGACGCTGCACATGCAACTGGAGGAGCGCATCGCGGCCTTCAAGAACGTGGAGGCGTGCGTAGTATTCCA ATCGGGATTCGCCGCCAACGCGGGCACCGTTTCCGCGATTCTCACGCCGGAAGACCACATCATCAGCGACGAATTGAACC ACGCCAGCATCATCGATGGCTGCCGCCTTTCGCGCGCCAAGATCCACGTCTTCGCCCACAAGGACGTGGCCGCCGCCGAG AAGATTCTCGCCGAACTGGCGCCGCTCCCGGGCCGCAAGCTGTTGATTACCGACGGCGTTTTCTCGATGGATGGCGACAT CGGCCCGCTGCCGGGCCTGGCCGGCGCGGCGGAAAAACACGGCGCCATCATGATGGTGGATGACGCGCATGCTTCGGGCG TGCTGGGGCGCAACGGACGCGGCACGATCGACCACTTCGGCGTTCACGGACGGGTCCACGTGCAGGTGGGGACGTTGTCG AAGGCTATCGGGGTGCTTGGCGGCTACGTCTGCGGCAGCCGCGACCTGATCGAGTTTCTGTATCATCGCGCGCGCCCCTT CCTGTTTTCCACCTCGCATCCGCCGGCTGTCGCCGCCGCTTGTCTGGCCGCGTTCGATGTGCTGGAGCAGGAGCCCGAGC GCATCGAACAGCTTTGGGACAACACGCGCTATTTCAAGAAGGGATTGCAGGAGGCCGGTTTCAACACCGGCATCAGCGAG ACGCCGATCACGCCGGTGATCGTCGGCGAGGCCGCGCTCGCACACCGGCTTTCGCGCGAACTCTTCGACGAGGGAGTGCT GGCCACCGGCATCGGGTTCCCGACGGTCGCGAAGGGAAAGGCGCGGGTGCGCACGATTGTGGCGTCCACGCACACGAAGG CGGAGTTGGATCAGGCGCTGGAGGCGTTCCGCAAGGTCGGGAAGAAGCTCGGGATACTCCAAGTGCGGTAG
Upstream 100 bases:
>100_bases CACGATCTTTTTATCGGCGAAGTGATGCATGTTACGGTTCGCGAGGGCAATCCATTGCTTTATTTCGCTAGCAGTTACCG GCATTTATAGGGAGACCGCA
Downstream 100 bases:
>100_bases CGTGAAGGAAGGACGCTATGCGTGCAGCTATTTTGCACTCGCCCGGATCGCCGCTGGAAATTGAGCAGGTGGCGGAGCCC TCACTCGGGGCAGGGCAGGT
Product: 2-amino-3-ketobutyrate coenzyme A ligase
Products: NA
Alternate protein names: AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; L-alanine--pimeloyl-CoA ligase [H]
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MSNPLSYLHDQLEAWRAEGTYQRLRILQSASAAEAEFDGKQVINLASNNYLGLTTHPKLREAALEAVRKYGVGSGAVRTI SGTMTLHMQLEERIAAFKNVEACVVFQSGFAANAGTVSAILTPEDHIISDELNHASIIDGCRLSRAKIHVFAHKDVAAAE KILAELAPLPGRKLLITDGVFSMDGDIGPLPGLAGAAEKHGAIMMVDDAHASGVLGRNGRGTIDHFGVHGRVHVQVGTLS KAIGVLGGYVCGSRDLIEFLYHRARPFLFSTSHPPAVAAACLAAFDVLEQEPERIEQLWDNTRYFKKGLQEAGFNTGISE TPITPVIVGEAALAHRLSRELFDEGVLATGIGFPTVAKGKARVRTIVASTHTKAELDQALEAFRKVGKKLGILQVR
Sequences:
>Translated_396_residues MSNPLSYLHDQLEAWRAEGTYQRLRILQSASAAEAEFDGKQVINLASNNYLGLTTHPKLREAALEAVRKYGVGSGAVRTI SGTMTLHMQLEERIAAFKNVEACVVFQSGFAANAGTVSAILTPEDHIISDELNHASIIDGCRLSRAKIHVFAHKDVAAAE KILAELAPLPGRKLLITDGVFSMDGDIGPLPGLAGAAEKHGAIMMVDDAHASGVLGRNGRGTIDHFGVHGRVHVQVGTLS KAIGVLGGYVCGSRDLIEFLYHRARPFLFSTSHPPAVAAACLAAFDVLEQEPERIEQLWDNTRYFKKGLQEAGFNTGISE TPITPVIVGEAALAHRLSRELFDEGVLATGIGFPTVAKGKARVRTIVASTHTKAELDQALEAFRKVGKKLGILQVR >Mature_395_residues SNPLSYLHDQLEAWRAEGTYQRLRILQSASAAEAEFDGKQVINLASNNYLGLTTHPKLREAALEAVRKYGVGSGAVRTIS GTMTLHMQLEERIAAFKNVEACVVFQSGFAANAGTVSAILTPEDHIISDELNHASIIDGCRLSRAKIHVFAHKDVAAAEK ILAELAPLPGRKLLITDGVFSMDGDIGPLPGLAGAAEKHGAIMMVDDAHASGVLGRNGRGTIDHFGVHGRVHVQVGTLSK AIGVLGGYVCGSRDLIEFLYHRARPFLFSTSHPPAVAAACLAAFDVLEQEPERIEQLWDNTRYFKKGLQEAGFNTGISET PITPVIVGEAALAHRLSRELFDEGVLATGIGFPTVAKGKARVRTIVASTHTKAELDQALEAFRKVGKKLGILQVR
Specific function: Catalyzes the decarboxylative condensation of pimeloyl- CoA and L-alanine to produce 8-amino-7-oxononanoate (AON), coenzyme A and/or converts 2-amino-3-ketobutyrate to glycine and acetyl-CoA [H]
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7657118, Length=389, Percent_Identity=40.3598971722365, Blast_Score=299, Evalue=4e-81, Organism=Homo sapiens, GI284448556, Length=415, Percent_Identity=37.8313253012048, Blast_Score=289, Evalue=3e-78, Organism=Homo sapiens, GI4758668, Length=374, Percent_Identity=34.4919786096257, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI119220554, Length=377, Percent_Identity=33.42175066313, Blast_Score=208, Evalue=7e-54, Organism=Homo sapiens, GI83977442, Length=391, Percent_Identity=31.4578005115089, Blast_Score=194, Evalue=8e-50, Organism=Homo sapiens, GI83977440, Length=391, Percent_Identity=31.4578005115089, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI83977444, Length=391, Percent_Identity=31.4578005115089, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI4502025, Length=359, Percent_Identity=33.7047353760446, Blast_Score=185, Evalue=5e-47, Organism=Homo sapiens, GI40316939, Length=359, Percent_Identity=33.7047353760446, Blast_Score=185, Evalue=5e-47, Organism=Homo sapiens, GI5454084, Length=380, Percent_Identity=28.4210526315789, Blast_Score=150, Evalue=1e-36, Organism=Escherichia coli, GI1790046, Length=389, Percent_Identity=43.4447300771208, Blast_Score=323, Evalue=1e-89, Organism=Escherichia coli, GI1786993, Length=352, Percent_Identity=36.3636363636364, Blast_Score=216, Evalue=2e-57, Organism=Caenorhabditis elegans, GI71994529, Length=392, Percent_Identity=40.8163265306122, Blast_Score=298, Evalue=4e-81, Organism=Caenorhabditis elegans, GI32566772, Length=370, Percent_Identity=32.7027027027027, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17560912, Length=364, Percent_Identity=29.6703296703297, Blast_Score=188, Evalue=5e-48, Organism=Caenorhabditis elegans, GI17560914, Length=364, Percent_Identity=29.6703296703297, Blast_Score=188, Evalue=5e-48, Organism=Caenorhabditis elegans, GI71982617, Length=381, Percent_Identity=25.7217847769029, Blast_Score=139, Evalue=2e-33, Organism=Caenorhabditis elegans, GI71982625, Length=381, Percent_Identity=25.7217847769029, Blast_Score=139, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6320267, Length=368, Percent_Identity=32.3369565217391, Blast_Score=195, Evalue=8e-51, Organism=Saccharomyces cerevisiae, GI6320438, Length=415, Percent_Identity=30.8433734939759, Blast_Score=187, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6323954, Length=258, Percent_Identity=30.6201550387597, Blast_Score=129, Evalue=9e-31, Organism=Drosophila melanogaster, GI24662918, Length=391, Percent_Identity=41.9437340153453, Blast_Score=314, Evalue=8e-86, Organism=Drosophila melanogaster, GI17136286, Length=374, Percent_Identity=33.1550802139037, Blast_Score=193, Evalue=1e-49, Organism=Drosophila melanogaster, GI17137420, Length=355, Percent_Identity=34.6478873239437, Blast_Score=192, Evalue=4e-49, Organism=Drosophila melanogaster, GI24653280, Length=387, Percent_Identity=29.1989664082687, Blast_Score=161, Evalue=6e-40, Organism=Drosophila melanogaster, GI24653276, Length=387, Percent_Identity=29.1989664082687, Blast_Score=161, Evalue=6e-40, Organism=Drosophila melanogaster, GI24653278, Length=387, Percent_Identity=29.1989664082687, Blast_Score=161, Evalue=6e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR004723 - InterPro: IPR010962 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.29; =2.3.1.47 [H]
Molecular weight: Translated: 42551; Mature: 42420
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPLSYLHDQLEAWRAEGTYQRLRILQSASAAEAEFDGKQVINLASNNYLGLTTHPKLR CCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCCCCHHEEEECCCCEEEECCCCHHH EAALEAVRKYGVGSGAVRTISGTMTLHMQLEERIAAFKNVEACVVFQSGFAANAGTVSAI HHHHHHHHHHCCCCCCEEEEECEEEEEEEHHHHHHHHCCCCEEEEEECCCCCCCCCEEEE LTPEDHIISDELNHASIIDGCRLSRAKIHVFAHKDVAAAEKILAELAPLPGRKLLITDGV ECCCCCCCCCCCCCHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCE FSMDGDIGPLPGLAGAAEKHGAIMMVDDAHASGVLGRNGRGTIDHFGVHGRVHVQVGTLS EECCCCCCCCCCCCCCHHHCCEEEEEECCCCCCCCCCCCCCCHHCCCCCCEEEEEECHHH KAIGVLGGYVCGSRDLIEFLYHRARPFLFSTSHPPAVAAACLAAFDVLEQEPERIEQLWD HHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHC NTRYFKKGLQEAGFNTGISETPITPVIVGEAALAHRLSRELFDEGVLATGIGFPTVAKGK CHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCEEECCCCCCCCCCH ARVRTIVASTHTKAELDQALEAFRKVGKKLGILQVR HHHEEHHHCCCCHHHHHHHHHHHHHHHHHCCCEECC >Mature Secondary Structure SNPLSYLHDQLEAWRAEGTYQRLRILQSASAAEAEFDGKQVINLASNNYLGLTTHPKLR CCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCCCCHHEEEECCCCEEEECCCCHHH EAALEAVRKYGVGSGAVRTISGTMTLHMQLEERIAAFKNVEACVVFQSGFAANAGTVSAI HHHHHHHHHHCCCCCCEEEEECEEEEEEEHHHHHHHHCCCCEEEEEECCCCCCCCCEEEE LTPEDHIISDELNHASIIDGCRLSRAKIHVFAHKDVAAAEKILAELAPLPGRKLLITDGV ECCCCCCCCCCCCCHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCE FSMDGDIGPLPGLAGAAEKHGAIMMVDDAHASGVLGRNGRGTIDHFGVHGRVHVQVGTLS EECCCCCCCCCCCCCCHHHCCEEEEEECCCCCCCCCCCCCCCHHCCCCCCEEEEEECHHH KAIGVLGGYVCGSRDLIEFLYHRARPFLFSTSHPPAVAAACLAAFDVLEQEPERIEQLWD HHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHC NTRYFKKGLQEAGFNTGISETPITPVIVGEAALAHRLSRELFDEGVLATGIGFPTVAKGK CHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCEEECCCCCCCCCCH ARVRTIVASTHTKAELDQALEAFRKVGKKLGILQVR HHHEEHHHCCCCHHHHHHHHHHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA