Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116624239
Identifier: 116624239
GI number: 116624239
Start: 6482631
End: 6483869
Strand: Reverse
Name: 116624239
Synonym: Acid_5156
Alternate gene names: NA
Gene position: 6483869-6482631 (Counterclockwise)
Preceding gene: 116624242
Following gene: 116624237
Centisome position: 65.06
GC content: 54.32
Gene sequence:
>1239_bases ATGCCTTACGTGAATCATTATTCGTTCCACATCTGGGATACGGAGTGGGGCCACATCACGATCAAGATGAGCGGGCATCC ACCTTTTGGCGCGCAGATCATTCTTAATGGTCATGACTATTTATCCTGCGCCGCCAAACAAGCCGGACTGACAGTGACCA AGCAAGCGAACTGTTTTGTCCAGACTTCCGACGCGGCAGGCTTGACGAAGATCGCAGACACCTTGTCTGAACCCGAGACA GAAGGGCGGCTTCGAGAGCTTTGCGACCGTTGGATTTATAGCAGTTGTTTGATATTCGGGCTGGACCTGGAGGAGCAGCA GCGCAGTGGATTTCAGTATCGGTATTCCACGTATCAATTGGAGTACTGCCGGAATTTCTACTTTTCCAGCGGAAGAAAAA TGTGGGAAATCCTGCAGCGCTTAGTCGATCGAACGCGCAGCAGATTGGACCTGAAAGTGGTGAAAACCATCTTCGGTTTC AAGAACCGGCCGCGAGTCAAGCGCCTGAAGCAGAACAAGTGGGGAGTTGAAGTCGAGACACCTACCTATGATCTGACGGT CTTTCACGTGCACTATGGCAAGTTGAGCCTGAAGATCTATAGCAAAGGCGAGTTCATTCTCCGCATCGAAGTGATGGTGC ACAATGCTTCGGATACGCCGTTTCGGCGATCGTTGGTGGATTTTCCGAAGTTGGTAAGCTGGGCGAAGGACGTCCTGGAA CGCTTTCTCGATGCCCTGCAATGTGTGGATGTTTGCTTTATTTCCGACGAGGCGATGGAAACGCTTCCGGAACCAAGCAC TGTGGGGAAGACCAGAGTTGGGGGAATCGATCTCAATCGTCCCCGGATGCGTTTGGTGGTGCGGACCATTCTGTCTCTGT CGACTTCACCGACTGGCTTTAGCGCCCGGGAGGTGAGCCGCAAAGTTCGTTCCTTGGGCGGATTGCCGGAGGACGAGTAC GGGTGCCGGCAAGCCGCCTACGATTTGAAAAAACTCCGCGGTAAAGAGTGGATCCGACGCAAAGGCAACTCCCGGAGGTA TGAAGCTGTGGCGGAAGGACTGCGATCCATGGCGGCTCTGATCGTGCTCCGCGATGATGTGATCAAGCCCTTGCTGGCAG CCCAGGGCCGGCTCAAACCAGGACGCCGGCCCACTCAAACCGCGCCTATTGACGCCCACTACGCGGCACTTCGGAGTCAG ATGAGAAAGCTATTCCTCGACCTTGGGATCGCTGCATAA
Upstream 100 bases:
>100_bases CGTGTGAACTTCCGTCGAGTCAAACCCATGAGTCAATTCTCCATTCATTGAATTTTGACTCTTAACTGTTTGTCTCAAAA TTGGGGACAAGTCCAAACCG
Downstream 100 bases:
>100_bases GATCGACAAAAGTTTTTGAGTTCATACCTGAAGTAGCACAAGGCGGCGAGCCGCAAATTGAAATCGTGGTTTACGCGTAC AACGGACGCTCCCTCACTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MPYVNHYSFHIWDTEWGHITIKMSGHPPFGAQIILNGHDYLSCAAKQAGLTVTKQANCFVQTSDAAGLTKIADTLSEPET EGRLRELCDRWIYSSCLIFGLDLEEQQRSGFQYRYSTYQLEYCRNFYFSSGRKMWEILQRLVDRTRSRLDLKVVKTIFGF KNRPRVKRLKQNKWGVEVETPTYDLTVFHVHYGKLSLKIYSKGEFILRIEVMVHNASDTPFRRSLVDFPKLVSWAKDVLE RFLDALQCVDVCFISDEAMETLPEPSTVGKTRVGGIDLNRPRMRLVVRTILSLSTSPTGFSAREVSRKVRSLGGLPEDEY GCRQAAYDLKKLRGKEWIRRKGNSRRYEAVAEGLRSMAALIVLRDDVIKPLLAAQGRLKPGRRPTQTAPIDAHYAALRSQ MRKLFLDLGIAA
Sequences:
>Translated_412_residues MPYVNHYSFHIWDTEWGHITIKMSGHPPFGAQIILNGHDYLSCAAKQAGLTVTKQANCFVQTSDAAGLTKIADTLSEPET EGRLRELCDRWIYSSCLIFGLDLEEQQRSGFQYRYSTYQLEYCRNFYFSSGRKMWEILQRLVDRTRSRLDLKVVKTIFGF KNRPRVKRLKQNKWGVEVETPTYDLTVFHVHYGKLSLKIYSKGEFILRIEVMVHNASDTPFRRSLVDFPKLVSWAKDVLE RFLDALQCVDVCFISDEAMETLPEPSTVGKTRVGGIDLNRPRMRLVVRTILSLSTSPTGFSAREVSRKVRSLGGLPEDEY GCRQAAYDLKKLRGKEWIRRKGNSRRYEAVAEGLRSMAALIVLRDDVIKPLLAAQGRLKPGRRPTQTAPIDAHYAALRSQ MRKLFLDLGIAA >Mature_411_residues PYVNHYSFHIWDTEWGHITIKMSGHPPFGAQIILNGHDYLSCAAKQAGLTVTKQANCFVQTSDAAGLTKIADTLSEPETE GRLRELCDRWIYSSCLIFGLDLEEQQRSGFQYRYSTYQLEYCRNFYFSSGRKMWEILQRLVDRTRSRLDLKVVKTIFGFK NRPRVKRLKQNKWGVEVETPTYDLTVFHVHYGKLSLKIYSKGEFILRIEVMVHNASDTPFRRSLVDFPKLVSWAKDVLER FLDALQCVDVCFISDEAMETLPEPSTVGKTRVGGIDLNRPRMRLVVRTILSLSTSPTGFSAREVSRKVRSLGGLPEDEYG CRQAAYDLKKLRGKEWIRRKGNSRRYEAVAEGLRSMAALIVLRDDVIKPLLAAQGRLKPGRRPTQTAPIDAHYAALRSQM RKLFLDLGIAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47196; Mature: 47065
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYVNHYSFHIWDTEWGHITIKMSGHPPFGAQIILNGHDYLSCAAKQAGLTVTKQANCFV CCCCCCEEEEEEECCCCEEEEEECCCCCCCCEEEECCCHHHHHHHHHCCCEEEECCCEEE QTSDAAGLTKIADTLSEPETEGRLRELCDRWIYSSCLIFGLDLEEQQRSGFQYRYSTYQL EECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCHHHHHCCCEEEEHHHHH EYCRNFYFSSGRKMWEILQRLVDRTRSRLDLKVVKTIFGFKNRPRVKRLKQNKWGVEVET HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEC PTYDLTVFHVHYGKLSLKIYSKGEFILRIEVMVHNASDTPFRRSLVDFPKLVSWAKDVLE CEEEEEEEEEEECEEEEEEEECCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH RFLDALQCVDVCFISDEAMETLPEPSTVGKTRVGGIDLNRPRMRLVVRTILSLSTSPTGF HHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCC SAREVSRKVRSLGGLPEDEYGCRQAAYDLKKLRGKEWIRRKGNSRRYEAVAEGLRSMAAL CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH IVLRDDVIKPLLAAQGRLKPGRRPTQTAPIDAHYAALRSQMRKLFLDLGIAA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PYVNHYSFHIWDTEWGHITIKMSGHPPFGAQIILNGHDYLSCAAKQAGLTVTKQANCFV CCCCCEEEEEEECCCCEEEEEECCCCCCCCEEEECCCHHHHHHHHHCCCEEEECCCEEE QTSDAAGLTKIADTLSEPETEGRLRELCDRWIYSSCLIFGLDLEEQQRSGFQYRYSTYQL EECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCHHHHHCCCEEEEHHHHH EYCRNFYFSSGRKMWEILQRLVDRTRSRLDLKVVKTIFGFKNRPRVKRLKQNKWGVEVET HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEC PTYDLTVFHVHYGKLSLKIYSKGEFILRIEVMVHNASDTPFRRSLVDFPKLVSWAKDVLE CEEEEEEEEEEECEEEEEEEECCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH RFLDALQCVDVCFISDEAMETLPEPSTVGKTRVGGIDLNRPRMRLVVRTILSLSTSPTGF HHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCC SAREVSRKVRSLGGLPEDEYGCRQAAYDLKKLRGKEWIRRKGNSRRYEAVAEGLRSMAAL CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH IVLRDDVIKPLLAAQGRLKPGRRPTQTAPIDAHYAALRSQMRKLFLDLGIAA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA