Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
---|---|
Accession | NC_008536 |
Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116624229
Identifier: 116624229
GI number: 116624229
Start: 6468332
End: 6469852
Strand: Reverse
Name: 116624229
Synonym: Acid_5146
Alternate gene names: NA
Gene position: 6469852-6468332 (Counterclockwise)
Preceding gene: 116624231
Following gene: 116624228
Centisome position: 64.92
GC content: 65.55
Gene sequence:
>1521_bases GTGAAGCCGCTTGTCATCGCCCTCTTCGCCTCCCTCCTGCGCGCACAGGAGCCGGCCGGCGCCATCCAGGGCAGCCTGCG CGACGCCATTACCCGCGCTCCCCTCGCCGGCGCCAACATCATTCTTCGCGGACCCGCATCACGCTCCGCCCTCACCGGCC CCGGCGGCGATTTCCGGTTCGACCAGCTTCCGCCCGGCGACTACGAGTTCGTCATTCACAAGTCCGGCTACCTGGATTCC GCTACCCCCGGTTTCCGCAGCACTCTTCGCCTCAAGCCCGGCGCCGTCACCGAAAGTCCCGTGATCGATCTCACTCCGCT CGGCGCCCTCGAAGGCGCCGTGCTCGATGAAGCCGGCAAACCGCTCGCCGCGGTGGTTGTCACGCTCGGCGCCGCTTCCC GCACCACCGATAAGGAAGGCCGCTTCGCTTTTGAGGACGTGATCCCGGGTTCGTACCGGGTAATTGTCAACGTGCCGCAC GAAGCCCGCGCGCGCAACCTGATGCGCGATCCCGCGACCGGCGATTACTATGGCTACGCTCCCGCGCAGTATTATCCCGG CGCCGACGACCCTCGCCTCGCCATCCCAGTCGCCATTCCCGCCGGCGTTCGCCTGCGTAATATTGATCTGCGCCTGCGCC GCACGCTGCTGGTCGAATTCACCGGGCGCGTGGTCGCAATGGCCGGCCGCGAACCGGTGTCAGGGGTCCACGTGCAACTA GCTGGCGTCGTCGCAGAAGCGGGCGATCCCCTCTGGCGTAAGCATCCCGCCAACTCAGATGGCACGTTTCGCTTTTCGCT CCTGCAGCCCGGCGCCTACACTCTCGCCGTCTTCCGTCCCGAGATCTCGCCGCTGCCATACCTCGTCCCGGTCGAAATCG GCAAGGCGGGCGTGGAGGATCGCGACATTGCTATCCCGGCGTTCGCCCGGCTGGAAGGCAGGATCCAATCCCGCGACCCA CAGGCGCGCTGGATGAACTCGGCTACCGTGACGCTCCGCCACGGTACCGGCGCCACCCTCTCGAGCAAGATCCGGACTGA TGGCACTTTCGATTTCGACGATGTTCCCGCCGGGGAATTCTTCATCGACGTCCGCCTGAATAACCTGCGTGCGAGCGGCG ATTCCTCGCGCCGGTACACCGTGAGTGCCGTCCGCTTTGGCGCGCAAAGTGGATTTCGAAAGCCCGTCACGGTCGCCGAA AACGGAAATCCGCCCATCGAAATCCAACTCTCGGATGAACCAGCGGGCGTTAGCGGCCGCATCGTATCCGACGGCGAGCC CGGTTCTTTTCTCGTTTCCGTCGCCAATCTGGCCACTCGGCGCCCTGCCGGTCTGATGATCGTTTCTGCTCCCCCCGAAT TTCAGTTTCCCGACCTGGACCCCGGCGATTACGAAGTGACCGCGAGACGCTTCACTCGCTTGAACAATGCGCCGCTGGCG AGCGGATCGTGCGACGAGAGCGTGCGAGTGACCGTCCGCGACGGCGCGGTTTCCAGCATCACCGTGCGCCCCTGCCCGTA G
Upstream 100 bases:
>100_bases GAAACTTCTGGCGTACTACAAGGAGGCGGGGGAATTGCATGTCGCGACCATTTTAACTCCGGGTGCGGCCGCCGCGCAGG CCTGATATTCTGAACACCGC
Downstream 100 bases:
>100_bases ATTGGCCGAAAACCACCGGCGCGGTGGTCCACCACCACCTCCCCGACATATGGTTCTCGCTAAGCCACACATTTTAAGGC AATTACTGATTGGCCTCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MKPLVIALFASLLRAQEPAGAIQGSLRDAITRAPLAGANIILRGPASRSALTGPGGDFRFDQLPPGDYEFVIHKSGYLDS ATPGFRSTLRLKPGAVTESPVIDLTPLGALEGAVLDEAGKPLAAVVVTLGAASRTTDKEGRFAFEDVIPGSYRVIVNVPH EARARNLMRDPATGDYYGYAPAQYYPGADDPRLAIPVAIPAGVRLRNIDLRLRRTLLVEFTGRVVAMAGREPVSGVHVQL AGVVAEAGDPLWRKHPANSDGTFRFSLLQPGAYTLAVFRPEISPLPYLVPVEIGKAGVEDRDIAIPAFARLEGRIQSRDP QARWMNSATVTLRHGTGATLSSKIRTDGTFDFDDVPAGEFFIDVRLNNLRASGDSSRRYTVSAVRFGAQSGFRKPVTVAE NGNPPIEIQLSDEPAGVSGRIVSDGEPGSFLVSVANLATRRPAGLMIVSAPPEFQFPDLDPGDYEVTARRFTRLNNAPLA SGSCDESVRVTVRDGAVSSITVRPCP
Sequences:
>Translated_506_residues MKPLVIALFASLLRAQEPAGAIQGSLRDAITRAPLAGANIILRGPASRSALTGPGGDFRFDQLPPGDYEFVIHKSGYLDS ATPGFRSTLRLKPGAVTESPVIDLTPLGALEGAVLDEAGKPLAAVVVTLGAASRTTDKEGRFAFEDVIPGSYRVIVNVPH EARARNLMRDPATGDYYGYAPAQYYPGADDPRLAIPVAIPAGVRLRNIDLRLRRTLLVEFTGRVVAMAGREPVSGVHVQL AGVVAEAGDPLWRKHPANSDGTFRFSLLQPGAYTLAVFRPEISPLPYLVPVEIGKAGVEDRDIAIPAFARLEGRIQSRDP QARWMNSATVTLRHGTGATLSSKIRTDGTFDFDDVPAGEFFIDVRLNNLRASGDSSRRYTVSAVRFGAQSGFRKPVTVAE NGNPPIEIQLSDEPAGVSGRIVSDGEPGSFLVSVANLATRRPAGLMIVSAPPEFQFPDLDPGDYEVTARRFTRLNNAPLA SGSCDESVRVTVRDGAVSSITVRPCP >Mature_506_residues MKPLVIALFASLLRAQEPAGAIQGSLRDAITRAPLAGANIILRGPASRSALTGPGGDFRFDQLPPGDYEFVIHKSGYLDS ATPGFRSTLRLKPGAVTESPVIDLTPLGALEGAVLDEAGKPLAAVVVTLGAASRTTDKEGRFAFEDVIPGSYRVIVNVPH EARARNLMRDPATGDYYGYAPAQYYPGADDPRLAIPVAIPAGVRLRNIDLRLRRTLLVEFTGRVVAMAGREPVSGVHVQL AGVVAEAGDPLWRKHPANSDGTFRFSLLQPGAYTLAVFRPEISPLPYLVPVEIGKAGVEDRDIAIPAFARLEGRIQSRDP QARWMNSATVTLRHGTGATLSSKIRTDGTFDFDDVPAGEFFIDVRLNNLRASGDSSRRYTVSAVRFGAQSGFRKPVTVAE NGNPPIEIQLSDEPAGVSGRIVSDGEPGSFLVSVANLATRRPAGLMIVSAPPEFQFPDLDPGDYEVTARRFTRLNNAPLA SGSCDESVRVTVRDGAVSSITVRPCP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54070; Mature: 54070
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLVIALFASLLRAQEPAGAIQGSLRDAITRAPLAGANIILRGPASRSALTGPGGDFRF CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCC DQLPPGDYEFVIHKSGYLDSATPGFRSTLRLKPGAVTESPVIDLTPLGALEGAVLDEAGK CCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCHHHHCCCC PLAAVVVTLGAASRTTDKEGRFAFEDVIPGSYRVIVNVPHEARARNLMRDPATGDYYGYA CCEEEEEEECCCCCCCCCCCCEEEECCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCC PAQYYPGADDPRLAIPVAIPAGVRLRNIDLRLRRTLLVEFTGRVVAMAGREPVSGVHVQL CCCCCCCCCCCCEEEEEECCCCCEEEEECCEEEEEEEEEECCEEEEEECCCCCCCEEEEE AGVVAEAGDPLWRKHPANSDGTFRFSLLQPGAYTLAVFRPEISPLPYLVPVEIGKAGVED EEEEECCCCCHHHCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCCCCC RDIAIPAFARLEGRIQSRDPQARWMNSATVTLRHGTGATLSSKIRTDGTFDFDDVPAGEF CCEECCHHHHHCCCCCCCCCHHHCCCCEEEEEECCCCCCEECEECCCCCCCCCCCCCCCE FIDVRLNNLRASGDSSRRYTVSAVRFGAQSGFRKPVTVAENGNPPIEIQLSDEPAGVSGR EEEEEEEEEECCCCCCCEEEEEEEEECHHCCCCCCEEEECCCCCCEEEEECCCCCCCCCE IVSDGEPGSFLVSVANLATRRPAGLMIVSAPPEFQFPDLDPGDYEVTARRFTRLNNAPLA EEECCCCCCEEEEEHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEHHHHHHHCCCCCCC SGSCDESVRVTVRDGAVSSITVRPCP CCCCCCCEEEEEECCCEEEEEEECCC >Mature Secondary Structure MKPLVIALFASLLRAQEPAGAIQGSLRDAITRAPLAGANIILRGPASRSALTGPGGDFRF CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCC DQLPPGDYEFVIHKSGYLDSATPGFRSTLRLKPGAVTESPVIDLTPLGALEGAVLDEAGK CCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCHHHHCCCC PLAAVVVTLGAASRTTDKEGRFAFEDVIPGSYRVIVNVPHEARARNLMRDPATGDYYGYA CCEEEEEEECCCCCCCCCCCCEEEECCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCC PAQYYPGADDPRLAIPVAIPAGVRLRNIDLRLRRTLLVEFTGRVVAMAGREPVSGVHVQL CCCCCCCCCCCCEEEEEECCCCCEEEEECCEEEEEEEEEECCEEEEEECCCCCCCEEEEE AGVVAEAGDPLWRKHPANSDGTFRFSLLQPGAYTLAVFRPEISPLPYLVPVEIGKAGVED EEEEECCCCCHHHCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCCCCC RDIAIPAFARLEGRIQSRDPQARWMNSATVTLRHGTGATLSSKIRTDGTFDFDDVPAGEF CCEECCHHHHHCCCCCCCCCHHHCCCCEEEEEECCCCCCEECEECCCCCCCCCCCCCCCE FIDVRLNNLRASGDSSRRYTVSAVRFGAQSGFRKPVTVAENGNPPIEIQLSDEPAGVSGR EEEEEEEEEECCCCCCCEEEEEEEEECHHCCCCCCEEEECCCCCCEEEEECCCCCCCCCE IVSDGEPGSFLVSVANLATRRPAGLMIVSAPPEFQFPDLDPGDYEVTARRFTRLNNAPLA EEECCCCCCEEEEEHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEHHHHHHHCCCCCCC SGSCDESVRVTVRDGAVSSITVRPCP CCCCCCCEEEEEECCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA