Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622964
Identifier: 116622964
GI number: 116622964
Start: 4902117
End: 4902446
Strand: Reverse
Name: 116622964
Synonym: Acid_3867
Alternate gene names: NA
Gene position: 4902446-4902117 (Counterclockwise)
Preceding gene: 116622966
Following gene: 116622961
Centisome position: 49.19
GC content: 56.67
Gene sequence:
>330_bases ATGTCGAGCTATCTGTTCCAAGCCAGCTACAGTTCATCCGCCTGGTCCGCGATGGTAAAAGACCCGCAGAACCGCGCCGA AGCTGTGAGTAAAGCCGTCGAGAAGTTAGGGGGCAAAGTCGGGAATTTCTGGTTCACCTTCGGCGACTATGACATCATCG GAATTCTGGAGATGCCGGACAACGTGAGTGCCGCGGCTTTTTCCATCGCCGTCGCCGCGGGCGGCGCTTGCACCAACATC AAGACCACGCCCCTGCTCAGCATGGAAGAGGGGATGTCGGCGATGAAGAAAGCGGGTAAATCGGGTTACAAGCCGGTCGG CAAAAAATAG
Upstream 100 bases:
>100_bases GTGTCATCTCTACCAGCTTAACGCCCGCACGCCGAATTCATATATACTGACCGGACCCGGACGCCCAAACGAGGACACTC CGGGGAAAGAGAGGACCTCA
Downstream 100 bases:
>100_bases TCCGGTCTCTGATGATGCGGCCCCAGCCCTCCGCGACTGGAACGGGAACGTGAAGAGCGTGAACAGGAACTACTGAGGCC GCACTTCGATCTTGACTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MSSYLFQASYSSSAWSAMVKDPQNRAEAVSKAVEKLGGKVGNFWFTFGDYDIIGILEMPDNVSAAAFSIAVAAGGACTNI KTTPLLSMEEGMSAMKKAGKSGYKPVGKK
Sequences:
>Translated_109_residues MSSYLFQASYSSSAWSAMVKDPQNRAEAVSKAVEKLGGKVGNFWFTFGDYDIIGILEMPDNVSAAAFSIAVAAGGACTNI KTTPLLSMEEGMSAMKKAGKSGYKPVGKK >Mature_108_residues SSYLFQASYSSSAWSAMVKDPQNRAEAVSKAVEKLGGKVGNFWFTFGDYDIIGILEMPDNVSAAAFSIAVAAGGACTNIK TTPLLSMEEGMSAMKKAGKSGYKPVGKK
Specific function: Unknown
COG id: COG4274
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11498; Mature: 11367
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSYLFQASYSSSAWSAMVKDPQNRAEAVSKAVEKLGGKVGNFWFTFGDYDIIGILEMPD CCCCEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEEEECCC NVSAAAFSIAVAAGGACTNIKTTPLLSMEEGMSAMKKAGKSGYKPVGKK CCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SSYLFQASYSSSAWSAMVKDPQNRAEAVSKAVEKLGGKVGNFWFTFGDYDIIGILEMPD CCCEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEEEECCC NVSAAAFSIAVAAGGACTNIKTTPLLSMEEGMSAMKKAGKSGYKPVGKK CCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA