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The map label for this gene is 116622324

Identifier: 116622324

GI number: 116622324

Start: 4071204

End: 4071641

Strand: Reverse

Name: 116622324

Synonym: Acid_3218

Alternate gene names: NA

Gene position: 4071641-4071204 (Counterclockwise)

Preceding gene: 116622326

Following gene: 116622321

Centisome position: 40.86

GC content: 62.79

Gene sequence:

>438_bases
ATGGGTGAAGCTTTTGAAATTCCGATCCAGGTGGAGACGGCCGACATCGACGAACTCGGGCACGTGAATAACATCGTGTA
TCTGCGGTGGGTCCAGGAGGTGGCGGTGGCGCATTGGAAGATGATTGCTCCGCCGGTGGACCAGGCGAAGTTGTTCTGGG
TGGTGCTGCGCCACGAGATCGATTACAGGCGGGCGGCGCGGCCGGGCGAGGCGCTGGTGGCGCGCACCTGGGTGGGCGGC
GCCACCCAACTGAAGTTCGAACGCTACACCGAGATCGTCCGCGCGGGAGACCGGACGCTGCTGGCGAAGGCACTCACGAT
CTGGTGCCCGATTGACGCGCAGACCGGAAGACCGACGCCGGTCAGCGCGGAAGTGCGGGCGATCTTTTCAACCGCAGATC
AACTTGGGCCACGAATGGACACGAATACACACGAATGA

Upstream 100 bases:

>100_bases
GGCAAACAGAATTGCGAATACTCTGTGAAGATTCATTGTCAAGGAATAGAAACCCGGTGCAGGTTATTCTAGCGATTTTC
GTTGCAAACTGGAGAGGAGC

Downstream 100 bases:

>100_bases
AAGACGCGGCAGGGGCTTTGGTCTTATTCGTGTGTATTCGCGGCTAGATTCCGGCGTACCAAGAGTAGCCGCCTTCGGGC
TGCCAGGAGCCGAGGCCCTT

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Family Protein; Acyl-ACP Thioesterase; Thioesterase-Like; 4-Hydroxybenzoyl-CoA Thioesterase Domain Protein; 4-Hydroxybenzoyl-CoA Thioesterase Domain-Containing Protein

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MGEAFEIPIQVETADIDELGHVNNIVYLRWVQEVAVAHWKMIAPPVDQAKLFWVVLRHEIDYRRAARPGEALVARTWVGG
ATQLKFERYTEIVRAGDRTLLAKALTIWCPIDAQTGRPTPVSAEVRAIFSTADQLGPRMDTNTHE

Sequences:

>Translated_145_residues
MGEAFEIPIQVETADIDELGHVNNIVYLRWVQEVAVAHWKMIAPPVDQAKLFWVVLRHEIDYRRAARPGEALVARTWVGG
ATQLKFERYTEIVRAGDRTLLAKALTIWCPIDAQTGRPTPVSAEVRAIFSTADQLGPRMDTNTHE
>Mature_144_residues
GEAFEIPIQVETADIDELGHVNNIVYLRWVQEVAVAHWKMIAPPVDQAKLFWVVLRHEIDYRRAARPGEALVARTWVGGA
TQLKFERYTEIVRAGDRTLLAKALTIWCPIDAQTGRPTPVSAEVRAIFSTADQLGPRMDTNTHE

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16362; Mature: 16231

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEAFEIPIQVETADIDELGHVNNIVYLRWVQEVAVAHWKMIAPPVDQAKLFWVVLRHEI
CCCEEECEEEEEECCCHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
DYRRAARPGEALVARTWVGGATQLKFERYTEIVRAGDRTLLAKALTIWCPIDAQTGRPTP
HHHHCCCCCCCEEEEECCCCCCEEHHHHHHHHHHCCCHHHEEHHEEEEECCCCCCCCCCC
VSAEVRAIFSTADQLGPRMDTNTHE
CCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GEAFEIPIQVETADIDELGHVNNIVYLRWVQEVAVAHWKMIAPPVDQAKLFWVVLRHEI
CCEEECEEEEEECCCHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
DYRRAARPGEALVARTWVGGATQLKFERYTEIVRAGDRTLLAKALTIWCPIDAQTGRPTP
HHHHCCCCCCCEEEEECCCCCCEEHHHHHHHHHHCCCHHHEEHHEEEEECCCCCCCCCCC
VSAEVRAIFSTADQLGPRMDTNTHE
CCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA