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The map label for this gene is recR

Identifier: 116622273

GI number: 116622273

Start: 4010912

End: 4011511

Strand: Direct

Name: recR

Synonym: Acid_3167

Alternate gene names: 116622273

Gene position: 4010912-4011511 (Clockwise)

Preceding gene: 116622272

Following gene: 116622274

Centisome position: 40.25

GC content: 65.5

Gene sequence:

>600_bases
ATGCCCGATTTCGCCGAACCGCTCGCGCGGCTGATCACCGAATTCAAGCGCCTTCCCGGCATCGGCCAGAAATCAGCGCA
GCGCCTCGCTTTCCACGTGCTGCGCGCCAAGCGCGAGGATGCCGAGCATCTCTCGCAGGCGATTCTGGACGTGAAGGACA
AGCTGGGCCTCTGCGCGGTCTGCAACAACATCGCCGACGGCGAGATCTGCCAGTATTGCAGCGATAGTAACCGCGACCCC
AGCGTTGTGTGCGTGGTGGAAGAGCCGCACAACATCGTCGGCATCGAGACCACGCGCCAGTTCGAGGGCCGCTACCACGT
GCTCCACGGCGCGCTCTCTCCCCTGCGCGGCGTCGGCCCCGACATGCTCAAGATCAAGGGGCTGGTGGAGCGCATCGGCC
AGGGCGAGGTGCGCGAGGTCATCGTGGCCACCAATCCCAATGTGGAAGGCGAGGCCACCGCGGTGTACCTGGCGCGCCTG
CTCAAGCCGCTCGGCGTGAAGGTCACGCGCATCGGCATGGGCATCCCGGTGGGCAGCGACCTGGAGTTCGCCGACGAAGT
CACCATCTCCAAAGCCATGGAAGGCCGCCGCGAAATGTAG

Upstream 100 bases:

>100_bases
GGCATGCGGCGAAGCGGTCAAGCAGGTGGAAGCGCAAATCCAGCAGAAGATGGGCGGAATGCTGGGCGGCATGGGACTGC
CCCCTGGCCTGTTCTAAACG

Downstream 100 bases:

>100_bases
GGCGGCCGGCGGCGAAGTCATGTCCAGAATTGCCTGCATCATCCTGGCCATTCTCTTTGCCGCTACTTCTCTGGGCTGGG
TGATGCTGGACCGGTCGCCG

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MPDFAEPLARLITEFKRLPGIGQKSAQRLAFHVLRAKREDAEHLSQAILDVKDKLGLCAVCNNIADGEICQYCSDSNRDP
SVVCVVEEPHNIVGIETTRQFEGRYHVLHGALSPLRGVGPDMLKIKGLVERIGQGEVREVIVATNPNVEGEATAVYLARL
LKPLGVKVTRIGMGIPVGSDLEFADEVTISKAMEGRREM

Sequences:

>Translated_199_residues
MPDFAEPLARLITEFKRLPGIGQKSAQRLAFHVLRAKREDAEHLSQAILDVKDKLGLCAVCNNIADGEICQYCSDSNRDP
SVVCVVEEPHNIVGIETTRQFEGRYHVLHGALSPLRGVGPDMLKIKGLVERIGQGEVREVIVATNPNVEGEATAVYLARL
LKPLGVKVTRIGMGIPVGSDLEFADEVTISKAMEGRREM
>Mature_198_residues
PDFAEPLARLITEFKRLPGIGQKSAQRLAFHVLRAKREDAEHLSQAILDVKDKLGLCAVCNNIADGEICQYCSDSNRDPS
VVCVVEEPHNIVGIETTRQFEGRYHVLHGALSPLRGVGPDMLKIKGLVERIGQGEVREVIVATNPNVEGEATAVYLARLL
KPLGVKVTRIGMGIPVGSDLEFADEVTISKAMEGRREM

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=193, Percent_Identity=44.0414507772021, Blast_Score=168, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_SOLUE (Q022F6)

Other databases:

- EMBL:   CP000473
- RefSeq:   YP_824429.1
- ProteinModelPortal:   Q022F6
- SMR:   Q022F6
- STRING:   Q022F6
- GeneID:   4428624
- GenomeReviews:   CP000473_GR
- KEGG:   sus:Acid_3167
- NMPDR:   fig|234267.9.peg.3006
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- PhylomeDB:   Q022F6
- ProtClustDB:   PRK00076
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21798; Mature: 21666

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDFAEPLARLITEFKRLPGIGQKSAQRLAFHVLRAKREDAEHLSQAILDVKDKLGLCAV
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
CNNIADGEICQYCSDSNRDPSVVCVVEEPHNIVGIETTRQFEGRYHVLHGALSPLRGVGP
HCCCCCHHHHHHHCCCCCCCCEEEEEECCCCEEECCHHHHHCCCHHHHHHHHHHHHCCCH
DMLKIKGLVERIGQGEVREVIVATNPNVEGEATAVYLARLLKPLGVKVTRIGMGIPVGSD
HHHHHHHHHHHHCCCCHHEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCC
LEFADEVTISKAMEGRREM
CCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PDFAEPLARLITEFKRLPGIGQKSAQRLAFHVLRAKREDAEHLSQAILDVKDKLGLCAV
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
CNNIADGEICQYCSDSNRDPSVVCVVEEPHNIVGIETTRQFEGRYHVLHGALSPLRGVGP
HCCCCCHHHHHHHCCCCCCCCEEEEEECCCCEEECCHHHHHCCCHHHHHHHHHHHHCCCH
DMLKIKGLVERIGQGEVREVIVATNPNVEGEATAVYLARLLKPLGVKVTRIGMGIPVGSD
HHHHHHHHHHHHCCCCHHEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCC
LEFADEVTISKAMEGRREM
CCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA