Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622251
Identifier: 116622251
GI number: 116622251
Start: 3986265
End: 3987287
Strand: Direct
Name: 116622251
Synonym: Acid_3144
Alternate gene names: NA
Gene position: 3986265-3987287 (Clockwise)
Preceding gene: 116622250
Following gene: 116622252
Centisome position: 40.0
GC content: 62.76
Gene sequence:
>1023_bases ATGGGAACGACCCCGGTAGACGATCTTTTGAAACAGTATATGGACTGCGCCGACTCCGATCGCGCGGAAGCGCTCCTCGG CGATCTGGTTGTCAACCACGCGCAGCCCGGAATCCGTAAAGTCGTTCGGTATAAGCTCGCTTTTCAAGGCGGACGCGAGG CCCAGGACATCGATGACGTCTCCGGCGACGTGGTTCTCGAACTCATCGGCCGCCTCCGCGCCATTCGCGACGGCCACCAC GCCGAGGCCATTGGAAGCTTCGCCGGTTACGCCGCCGTGGCCGCCTATCATGCCTGCAATGAGTACCTGCGCCGCAAATA TCCCAACCGGCATCGCCTCAAGAACCGCCTCCGCTACCTCCTGAACAATGAGCCCCGCTTCGCCGTTTGGGAAGGGCCGT CCTCGGATTGGGTCTGCGGTTTCCGCAAGTGGCAGGTCGAAGGCGTCGGGCCGGCAACCTCGGACTTGGTCAGCCAGTGG CGCCATACCCTCGGCGATCTGCCGCGCGGCCAGTCCGCGATGCCGCCGCCGGAGCTGCTCGCCGCCGTCTTCGGCCGCTT CGAAGGCCCCCTCGAGTTCGATGAACTGGTAGCCATCGTCGGGTATTTCTGGGGAGTCGATGACCTTGCCCCCGCCACCG AAAAAAGCGCCCGCGAGGTGGAATCGAAGGATGTGGATCCCGGCGCCCGCATGGAACTGCGCCAGTGGCTGACCGAGTTG TGGACGCAGATCCGCGAGCTCCCGCGCGCCCAGCGCGTCGCCCTCCTTTTAAATCTCCGCGCCGCCGATTCCGCCCCCGC CGTCACCCTGTTCCCCGTCACCGGAGTCGCCAGCGTAAGTAATATCGCAGAGACCTTGGAATTCAGTTCGGAAACTTTCG CCGCCCTATGGAAGTCCTTGCCCATTGAGGATTTAGCCATCGCGGAGCTGCTCGGCGTCACACGCCAGCAGGTGATCAAC CTGCGCAAATCCGCTCGCGAACGCCTGACCCGTAGAATAGGTGGAAAATATCGTTTATCGTAA
Upstream 100 bases:
>100_bases TGAGCGAGCAGTGAGGCTAGAGCCGCGAGGCAGCCGGTTTTGCCTTGGCCGTCCCGGTTGATGATACGCTATGGTCTGCA TCCGTCACTAGTCCGAAGCG
Downstream 100 bases:
>100_bases GTTAGTAATATTCGGCCGTAGTCGACTTCAAAGTTAAGTGAGCCATATGATTGAGGCGGCCCATCTCACGGAACAGCAAT TCTCCGGCTTCCGGCATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MGTTPVDDLLKQYMDCADSDRAEALLGDLVVNHAQPGIRKVVRYKLAFQGGREAQDIDDVSGDVVLELIGRLRAIRDGHH AEAIGSFAGYAAVAAYHACNEYLRRKYPNRHRLKNRLRYLLNNEPRFAVWEGPSSDWVCGFRKWQVEGVGPATSDLVSQW RHTLGDLPRGQSAMPPPELLAAVFGRFEGPLEFDELVAIVGYFWGVDDLAPATEKSAREVESKDVDPGARMELRQWLTEL WTQIRELPRAQRVALLLNLRAADSAPAVTLFPVTGVASVSNIAETLEFSSETFAALWKSLPIEDLAIAELLGVTRQQVIN LRKSARERLTRRIGGKYRLS
Sequences:
>Translated_340_residues MGTTPVDDLLKQYMDCADSDRAEALLGDLVVNHAQPGIRKVVRYKLAFQGGREAQDIDDVSGDVVLELIGRLRAIRDGHH AEAIGSFAGYAAVAAYHACNEYLRRKYPNRHRLKNRLRYLLNNEPRFAVWEGPSSDWVCGFRKWQVEGVGPATSDLVSQW RHTLGDLPRGQSAMPPPELLAAVFGRFEGPLEFDELVAIVGYFWGVDDLAPATEKSAREVESKDVDPGARMELRQWLTEL WTQIRELPRAQRVALLLNLRAADSAPAVTLFPVTGVASVSNIAETLEFSSETFAALWKSLPIEDLAIAELLGVTRQQVIN LRKSARERLTRRIGGKYRLS >Mature_339_residues GTTPVDDLLKQYMDCADSDRAEALLGDLVVNHAQPGIRKVVRYKLAFQGGREAQDIDDVSGDVVLELIGRLRAIRDGHHA EAIGSFAGYAAVAAYHACNEYLRRKYPNRHRLKNRLRYLLNNEPRFAVWEGPSSDWVCGFRKWQVEGVGPATSDLVSQWR HTLGDLPRGQSAMPPPELLAAVFGRFEGPLEFDELVAIVGYFWGVDDLAPATEKSAREVESKDVDPGARMELRQWLTELW TQIRELPRAQRVALLLNLRAADSAPAVTLFPVTGVASVSNIAETLEFSSETFAALWKSLPIEDLAIAELLGVTRQQVINL RKSARERLTRRIGGKYRLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37962; Mature: 37830
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTTPVDDLLKQYMDCADSDRAEALLGDLVVNHAQPGIRKVVRYKLAFQGGREAQDIDDV CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHC SGDVVLELIGRLRAIRDGHHAEAIGSFAGYAAVAAYHACNEYLRRKYPNRHRLKNRLRYL CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LNNEPRFAVWEGPSSDWVCGFRKWQVEGVGPATSDLVSQWRHTLGDLPRGQSAMPPPELL HCCCCCEEEECCCCCCCEECCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHH AAVFGRFEGPLEFDELVAIVGYFWGVDDLAPATEKSAREVESKDVDPGARMELRQWLTEL HHHHHHCCCCCCHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH WTQIRELPRAQRVALLLNLRAADSAPAVTLFPVTGVASVSNIAETLEFSSETFAALWKSL HHHHHHCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHC PIEDLAIAELLGVTRQQVINLRKSARERLTRRIGGKYRLS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GTTPVDDLLKQYMDCADSDRAEALLGDLVVNHAQPGIRKVVRYKLAFQGGREAQDIDDV CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHC SGDVVLELIGRLRAIRDGHHAEAIGSFAGYAAVAAYHACNEYLRRKYPNRHRLKNRLRYL CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LNNEPRFAVWEGPSSDWVCGFRKWQVEGVGPATSDLVSQWRHTLGDLPRGQSAMPPPELL HCCCCCEEEECCCCCCCEECCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHH AAVFGRFEGPLEFDELVAIVGYFWGVDDLAPATEKSAREVESKDVDPGARMELRQWLTEL HHHHHHCCCCCCHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH WTQIRELPRAQRVALLLNLRAADSAPAVTLFPVTGVASVSNIAETLEFSSETFAALWKSL HHHHHHCCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHC PIEDLAIAELLGVTRQQVINLRKSARERLTRRIGGKYRLS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA