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The map label for this gene is 116622250

Identifier: 116622250

GI number: 116622250

Start: 3984229

End: 3986178

Strand: Direct

Name: 116622250

Synonym: Acid_3143

Alternate gene names: NA

Gene position: 3984229-3986178 (Clockwise)

Preceding gene: 116622245

Following gene: 116622251

Centisome position: 39.98

GC content: 66.87

Gene sequence:

>1950_bases
ATGGTGGGTGGCATGGATGCGATGCGGATCGGACGGGAGGTGTGCGGCGACGCGGAGGCGGCGTGCAAGCTGGAATGGCT
GGAGACGAACGGGCTGGGCGGGTTCGCGTCGTCAACCGTGATCGGGCTGAATACGCGGCGATATCACGGACTGCTGACGG
CGGCCACGGAGCCTCCGGTAGGGCGGATGCTGCTGCTCTCCAAGCTGGAAGAGACCGTAGCGATTGGCGGACGGCGCTAC
GAGCTAGGTTCGAACCGTTACCCCGGCACGATTCATCCCGAGGGCTACCGTTATCTGCGCGAGTTCCGGCTGGATCCGTT
CCCGGTGTGGGTATTCGAGGTGGAAGGCGTCACGATCGAGAAGCGCGTCTTCATGGTGCACGGCGAGAACACGACGGTAC
TGGAGTATGAATGCCTGGGAGCCGCCGAACTGGAACTCCGGCCGCTCCTGGCCTTTCGCGACTATCACGCGACCACACAC
CGCAACGATGCCATCGATGGGCATTTCGAATCGCACGACGGGATGGCGGTAATGCGTCCTTATCCCGGTCTTCCCGCGAT
GTACCTGGCGCACAGCGGCGCGGTGGTGTCGGTGGGCGCGGGCTGGTATTACAATTTCGAATTCGAGCGTGAGCGCGAGC
GGGGGCTGGACTTCGTGGAAGACCTGTTCAATCCGCTGGTTCTGCGCTTTGCGGCGGCGCCCGGGAGGTCGATCGCGGTG
ATCGCGTCCACTGTGCCGCACGTGGCCGGGGATGCCGAGGGGCTGCGAAAGAAGGAGCTCCAGCGGCGCGCCGCGATCGT
CGGCCGGGCGCCGCGGAATGACGCGATGACCCAGCGGCTGACCGCGGCGGCCGATGCTTTCCTGGTGAAGCGCGGCGAAT
TGGAGACGGTGATCGCGGGGTACCACTGGTTCTCCGATTTCGGCCGGGACGCGACGATCGCGCTGCCGGGCTTGGCGCTG
GCGACTCGGCGATACGAGGAGGCGCGGCGCATCCTCCTGGCATTCGCGGAGAGCATGAGTCAGGGGATGCTGCCGAATCG
GTTCCCGGACCGGGGGGAGGCGCCGGAGTACAACTCGGTGGATGCGACGCTGTGGTTTTTCGAGGCGGCGCGCGCATATG
GCGAGCAGAGCGGCGACCACGAGTTCGTCCGCGAGCGGCTCTACGCGAAGCTGAAGGACGCGGTGGAATGGCATGTGCGC
GGGACGCGGTACGGGATCCATGTCGATTGCGATGGACTGCTGGCGTGCGGCGAGCCGGGCGTGCAGTTGACGTGGATGGA
CGCGAAGGTCGGGGACCGGGTGGTGACGCCGCGCGGGGGCAAGCCGGTGGAGATTCAGGCGCTCTGGTACAACGCGCTGC
GCTCGCTGCAGGGGATGGCGGAGCGATTCGGCGAGGCTGCCGTGGCGCAGGAGCTGGGCGCGTCGGCGGCGCGGGCTCGG
GTGAGTTTCGGCGCGCAGTTCTGGAACGGCGCGGCCGGCTGTCTATATGACGTGGTGGATGGCGAGCGGCGCGATGGCTC
GATCCGGCCGAACCAGATCTTCACGATCAGTTTGCGCCACCGTATTCTGGGGAACGACGAACTGGCGCGGAGCGTGCTCG
ACGTGGTGGAGCGAGACCTGCTTACGCCCGCCGGTTTGCGGACGCTATCGCCGCGCGACGCCGCGTATTGCGGACGGTAC
GAAGGCGGCGTGGCGAGCCGCGACGGCGTGTATCACCAGGGAACGGTGTGGCCGTGGCTGATGGGGCCGTTCGTGACGGC
GTATCGCAAAGTGAAGGACGGCGATCCGCGGGTAGCCGAGTGGTTGCGGGGGTTCGCCGGTCAGATGGATGCGATGTGTC
TGGGACAGTGGCCGGAGATTGCCGATGGGGATGCACCGCATGCCCCGCGGGGGTGTGTGGCGCAGGCCTGGAGCGTGGGT
GAACTGCTGCGGGTGATGAGCGAGCAGTGA

Upstream 100 bases:

>100_bases
GACGTTGCCGGAGCCGATGATTCCAATTCTCATGCCCACACGATGACACGGCAATCGGGGCGGCGTCAGCTAGCCGTTTG
GGCAGGGTCGGGTTGGTTGT

Downstream 100 bases:

>100_bases
GGCTAGAGCCGCGAGGCAGCCGGTTTTGCCTTGGCCGTCCCGGTTGATGATACGCTATGGTCTGCATCCGTCACTAGTCC
GAAGCGATGGGAACGACCCC

Product: glycogen debranching enzyme

Products: NA

Alternate protein names: Amylo-Alpha-16-Glucosidase; Glycogen Debranching Protein; Glycogen Debranching -Related Protein; Glycogen Debranching ; 4-Alpha-Glucanotransferase; Amylo-Alpha-1 6-Glucosidase; Glyen Debranching; Amylo-Alpha-1 6-Glucosidase Family; Neutral Invertase; AmylO-Alpha-16-Glucosidase; Glycogen Debranching Family Protein; Glycogen Debranching /Alpha-Amylase; Glycogen Debranching Archaeal Type; Glycogen Debranching Isoform 1 Related Protein; Amylo-1 6-Glucosidase

Number of amino acids: Translated: 649; Mature: 649

Protein sequence:

>649_residues
MVGGMDAMRIGREVCGDAEAACKLEWLETNGLGGFASSTVIGLNTRRYHGLLTAATEPPVGRMLLLSKLEETVAIGGRRY
ELGSNRYPGTIHPEGYRYLREFRLDPFPVWVFEVEGVTIEKRVFMVHGENTTVLEYECLGAAELELRPLLAFRDYHATTH
RNDAIDGHFESHDGMAVMRPYPGLPAMYLAHSGAVVSVGAGWYYNFEFERERERGLDFVEDLFNPLVLRFAAAPGRSIAV
IASTVPHVAGDAEGLRKKELQRRAAIVGRAPRNDAMTQRLTAAADAFLVKRGELETVIAGYHWFSDFGRDATIALPGLAL
ATRRYEEARRILLAFAESMSQGMLPNRFPDRGEAPEYNSVDATLWFFEAARAYGEQSGDHEFVRERLYAKLKDAVEWHVR
GTRYGIHVDCDGLLACGEPGVQLTWMDAKVGDRVVTPRGGKPVEIQALWYNALRSLQGMAERFGEAAVAQELGASAARAR
VSFGAQFWNGAAGCLYDVVDGERRDGSIRPNQIFTISLRHRILGNDELARSVLDVVERDLLTPAGLRTLSPRDAAYCGRY
EGGVASRDGVYHQGTVWPWLMGPFVTAYRKVKDGDPRVAEWLRGFAGQMDAMCLGQWPEIADGDAPHAPRGCVAQAWSVG
ELLRVMSEQ

Sequences:

>Translated_649_residues
MVGGMDAMRIGREVCGDAEAACKLEWLETNGLGGFASSTVIGLNTRRYHGLLTAATEPPVGRMLLLSKLEETVAIGGRRY
ELGSNRYPGTIHPEGYRYLREFRLDPFPVWVFEVEGVTIEKRVFMVHGENTTVLEYECLGAAELELRPLLAFRDYHATTH
RNDAIDGHFESHDGMAVMRPYPGLPAMYLAHSGAVVSVGAGWYYNFEFERERERGLDFVEDLFNPLVLRFAAAPGRSIAV
IASTVPHVAGDAEGLRKKELQRRAAIVGRAPRNDAMTQRLTAAADAFLVKRGELETVIAGYHWFSDFGRDATIALPGLAL
ATRRYEEARRILLAFAESMSQGMLPNRFPDRGEAPEYNSVDATLWFFEAARAYGEQSGDHEFVRERLYAKLKDAVEWHVR
GTRYGIHVDCDGLLACGEPGVQLTWMDAKVGDRVVTPRGGKPVEIQALWYNALRSLQGMAERFGEAAVAQELGASAARAR
VSFGAQFWNGAAGCLYDVVDGERRDGSIRPNQIFTISLRHRILGNDELARSVLDVVERDLLTPAGLRTLSPRDAAYCGRY
EGGVASRDGVYHQGTVWPWLMGPFVTAYRKVKDGDPRVAEWLRGFAGQMDAMCLGQWPEIADGDAPHAPRGCVAQAWSVG
ELLRVMSEQ
>Mature_649_residues
MVGGMDAMRIGREVCGDAEAACKLEWLETNGLGGFASSTVIGLNTRRYHGLLTAATEPPVGRMLLLSKLEETVAIGGRRY
ELGSNRYPGTIHPEGYRYLREFRLDPFPVWVFEVEGVTIEKRVFMVHGENTTVLEYECLGAAELELRPLLAFRDYHATTH
RNDAIDGHFESHDGMAVMRPYPGLPAMYLAHSGAVVSVGAGWYYNFEFERERERGLDFVEDLFNPLVLRFAAAPGRSIAV
IASTVPHVAGDAEGLRKKELQRRAAIVGRAPRNDAMTQRLTAAADAFLVKRGELETVIAGYHWFSDFGRDATIALPGLAL
ATRRYEEARRILLAFAESMSQGMLPNRFPDRGEAPEYNSVDATLWFFEAARAYGEQSGDHEFVRERLYAKLKDAVEWHVR
GTRYGIHVDCDGLLACGEPGVQLTWMDAKVGDRVVTPRGGKPVEIQALWYNALRSLQGMAERFGEAAVAQELGASAARAR
VSFGAQFWNGAAGCLYDVVDGERRDGSIRPNQIFTISLRHRILGNDELARSVLDVVERDLLTPAGLRTLSPRDAAYCGRY
EGGVASRDGVYHQGTVWPWLMGPFVTAYRKVKDGDPRVAEWLRGFAGQMDAMCLGQWPEIADGDAPHAPRGCVAQAWSVG
ELLRVMSEQ

Specific function: Unknown

COG id: COG3408

COG function: function code G; Glycogen debranching enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71894; Mature: 71894

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGGMDAMRIGREVCGDAEAACKLEWLETNGLGGFASSTVIGLNTRRYHGLLTAATEPPV
CCCCHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCCEEEECCCHHHCEEEEECCCCCC
GRMLLLSKLEETVAIGGRRYELGSNRYPGTIHPEGYRYLREFRLDPFPVWVFEVEGVTIE
HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCEEEE
KRVFMVHGENTTVLEYECLGAAELELRPLLAFRDYHATTHRNDAIDGHFESHDGMAVMRP
EEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECC
YPGLPAMYLAHSGAVVSVGAGWYYNFEFERERERGLDFVEDLFNPLVLRFAAAPGRSIAV
CCCCCHHHHCCCCCEEEECCCEEEEEEECCCHHCCCHHHHHHHHHHHHHHHCCCCCEEEE
IASTVPHVAGDAEGLRKKELQRRAAIVGRAPRNDAMTQRLTAAADAFLVKRGELETVIAG
EEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEH
YHWFSDFGRDATIALPGLALATRRYEEARRILLAFAESMSQGMLPNRFPDRGEAPEYNSV
HHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
DATLWFFEAARAYGEQSGDHEFVRERLYAKLKDAVEWHVRGTRYGIHVDCDGLLACGEPG
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEECCEEEEEEECCCCEEECCCCC
VQLTWMDAKVGDRVVTPRGGKPVEIQALWYNALRSLQGMAERFGEAAVAQELGASAARAR
CEEEEEECCCCCEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VSFGAQFWNGAAGCLYDVVDGERRDGSIRPNQIFTISLRHRILGNDELARSVLDVVERDL
HHHCHHHHCCCCHHHHHHCCCCCCCCCCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHH
LTPAGLRTLSPRDAAYCGRYEGGVASRDGVYHQGTVWPWLMGPFVTAYRKVKDGDPRVAE
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCHHHHH
WLRGFAGQMDAMCLGQWPEIADGDAPHAPRGCVAQAWSVGELLRVMSEQ
HHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure
MVGGMDAMRIGREVCGDAEAACKLEWLETNGLGGFASSTVIGLNTRRYHGLLTAATEPPV
CCCCHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCCEEEECCCHHHCEEEEECCCCCC
GRMLLLSKLEETVAIGGRRYELGSNRYPGTIHPEGYRYLREFRLDPFPVWVFEVEGVTIE
HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCEEEE
KRVFMVHGENTTVLEYECLGAAELELRPLLAFRDYHATTHRNDAIDGHFESHDGMAVMRP
EEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECC
YPGLPAMYLAHSGAVVSVGAGWYYNFEFERERERGLDFVEDLFNPLVLRFAAAPGRSIAV
CCCCCHHHHCCCCCEEEECCCEEEEEEECCCHHCCCHHHHHHHHHHHHHHHCCCCCEEEE
IASTVPHVAGDAEGLRKKELQRRAAIVGRAPRNDAMTQRLTAAADAFLVKRGELETVIAG
EEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEH
YHWFSDFGRDATIALPGLALATRRYEEARRILLAFAESMSQGMLPNRFPDRGEAPEYNSV
HHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
DATLWFFEAARAYGEQSGDHEFVRERLYAKLKDAVEWHVRGTRYGIHVDCDGLLACGEPG
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEECCEEEEEEECCCCEEECCCCC
VQLTWMDAKVGDRVVTPRGGKPVEIQALWYNALRSLQGMAERFGEAAVAQELGASAARAR
CEEEEEECCCCCEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VSFGAQFWNGAAGCLYDVVDGERRDGSIRPNQIFTISLRHRILGNDELARSVLDVVERDL
HHHCHHHHCCCCHHHHHHCCCCCCCCCCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHH
LTPAGLRTLSPRDAAYCGRYEGGVASRDGVYHQGTVWPWLMGPFVTAYRKVKDGDPRVAE
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCHHHHH
WLRGFAGQMDAMCLGQWPEIADGDAPHAPRGCVAQAWSVGELLRVMSEQ
HHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA