Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622244
Identifier: 116622244
GI number: 116622244
Start: 3978082
End: 3979758
Strand: Direct
Name: 116622244
Synonym: Acid_3137
Alternate gene names: NA
Gene position: 3978082-3979758 (Clockwise)
Preceding gene: 116622243
Following gene: 116622245
Centisome position: 39.92
GC content: 62.08
Gene sequence:
>1677_bases GTGCTGTTCCGTGCGAGCGTAACTGCTGTCACTCTACTTTGCGGAGTGGCGCTTGGGCAGACTGCGGGCGAAACTCCGGC GAAATTCGACGTCGCGGACGTACACAGCAGCCCGCGCACAACGCAGCCCTTTGCGCGAGGGCCGTTCTACAACGGCGGCC GGTACGAGCTGCGGTTTGCGACGATGCTGGACCTTATCCACACGGCGTACGGCGTGGACCCCGAAAAAGTGATCGGCGGG CCCAACTGGTTGGAAATGGACCGGTTCGACGTATTCGCGAAGGCACCTGCGGGATCGTCGACGGAATCGCGGCGGCGCAT GCTGCAGGCGCTGCTGGCGGAGCGGTTCCAACTGGTGGTGCATAACGATAGCAAGCCCATCCCGGCGTTCGGCCTCAAGG CGGGAAAACGGCCGTTGCTGAAGGAAACGGAAGGCGCCGGATCGGGCTGTAACTTCACCGTGGAAAATACGACCCCACCT CCGGCGGGCGGAGGTCCGCCGCAAGGACCGATTAACTTACCGGTGATCGTGTATACGTGCAAGAACACAACGATGGCGAC GTTCGCGGATGGCATGCTTTCGATGCCAGGGGCGGGCCAGTATTTTCAGAACCGTCTGGTGGTGGACCAGACGGAGTTGG GCGGCGCATGGGATTTCACATTGAGGTTTACTCCAAAGGTCCCGGCAGGACTGGCGACTGTGGGTGAGAACATCCCGCTT TTCGATGCGTTGGAGAAGCAGCTTGGGTTGAAACTGGAGCCGGCGACGATCCCGATGCCGGTGATCACGGTGGACAGCGT GAATCGCAAGCCCACGGAGAATCCTCCCGATGTGGCCGCGAGTTTTCCGCCGCTGCCGACGGAATTCGACGTGGCGGAGA TCAAGCCATCGGTCACGCCTCCAGGCGGCCCAGGGTCGGCGCGTCCGGAAATTAAGAACGGGCGAATTTATTTGCCGGGC ATCGGGCTGAAGAACCTGATCGCGCTGGCGTGGGACATCAACGGCGACGAATTGATGGCGAACGCACCGAAGTGGCTGGA TTCGGAGCGCTTCGACGTGATCGCGAAGGCTCCGGCCGGAGTGGCGATCGGCGATCTTACGCCCTCGCGCACGGCGGTGC CGGTGAACATCGATGCGCTAAGGCCGATGCTGCGCGCGCTGCTGATCGACCGGTTTCAGATGAAAGTCCACATGGAGGAC CGTCCGGTGGCGGCGTACACGCTGGTGGCGGCGAAGCCCAAACTGAAGCAGGCGGATCCGAACAGCCGGACGAAGTGGCA GGAGGGCGCGGCCACAGATTCCAAGGATAAGAACGCAAATTCGTCGCTGGGAAGGCTGGTGACTTGCCAGAACGTGACGA TGGCGCAATTCGCCGAACTGCTGCCTGGCATCGCTCCGGGCTATCTGCGTACGCAGGTGGTGGATGGCACAGGGCTCGAG GGCGGTTTTGACTTCACCTTCAGTTTCAGTCCGGCGGGGCTATTCCAGGTGAATCAGGGGCGCAGCGAGGACAGCGGGGC CGCGGCAGGGCCGGTTCCCGAGGCATCGCTTCCGAGCGGCGCGCTTTCGCTGTTCGACGCGCTGACCAAACAACTCGGGT TGAAGTTGGAGATGCAGAAGCGGCCGACTCCGGTGCTGGTTATCGACCATATCAATCAGAAGCCGACGGACAACTAA
Upstream 100 bases:
>100_bases GAGCGGAGCGGGCTGATCATGAAAAGCGCGCAACCGGCGGGAACCGCGGGTCCTTTTCCGGTGTCTAACGTCCAATCGTG AAGCGAGGAGGGTTCATATC
Downstream 100 bases:
>100_bases GGGCATTACACTGATGTCGCGCGGGACCGCCCCTTGTTTTGCGCGCGGCGTCGTGAATTTGGAACAAGGGCAGAGTGGGG TGCGTATCCCTCGCGAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MLFRASVTAVTLLCGVALGQTAGETPAKFDVADVHSSPRTTQPFARGPFYNGGRYELRFATMLDLIHTAYGVDPEKVIGG PNWLEMDRFDVFAKAPAGSSTESRRRMLQALLAERFQLVVHNDSKPIPAFGLKAGKRPLLKETEGAGSGCNFTVENTTPP PAGGGPPQGPINLPVIVYTCKNTTMATFADGMLSMPGAGQYFQNRLVVDQTELGGAWDFTLRFTPKVPAGLATVGENIPL FDALEKQLGLKLEPATIPMPVITVDSVNRKPTENPPDVAASFPPLPTEFDVAEIKPSVTPPGGPGSARPEIKNGRIYLPG IGLKNLIALAWDINGDELMANAPKWLDSERFDVIAKAPAGVAIGDLTPSRTAVPVNIDALRPMLRALLIDRFQMKVHMED RPVAAYTLVAAKPKLKQADPNSRTKWQEGAATDSKDKNANSSLGRLVTCQNVTMAQFAELLPGIAPGYLRTQVVDGTGLE GGFDFTFSFSPAGLFQVNQGRSEDSGAAAGPVPEASLPSGALSLFDALTKQLGLKLEMQKRPTPVLVIDHINQKPTDN
Sequences:
>Translated_558_residues MLFRASVTAVTLLCGVALGQTAGETPAKFDVADVHSSPRTTQPFARGPFYNGGRYELRFATMLDLIHTAYGVDPEKVIGG PNWLEMDRFDVFAKAPAGSSTESRRRMLQALLAERFQLVVHNDSKPIPAFGLKAGKRPLLKETEGAGSGCNFTVENTTPP PAGGGPPQGPINLPVIVYTCKNTTMATFADGMLSMPGAGQYFQNRLVVDQTELGGAWDFTLRFTPKVPAGLATVGENIPL FDALEKQLGLKLEPATIPMPVITVDSVNRKPTENPPDVAASFPPLPTEFDVAEIKPSVTPPGGPGSARPEIKNGRIYLPG IGLKNLIALAWDINGDELMANAPKWLDSERFDVIAKAPAGVAIGDLTPSRTAVPVNIDALRPMLRALLIDRFQMKVHMED RPVAAYTLVAAKPKLKQADPNSRTKWQEGAATDSKDKNANSSLGRLVTCQNVTMAQFAELLPGIAPGYLRTQVVDGTGLE GGFDFTFSFSPAGLFQVNQGRSEDSGAAAGPVPEASLPSGALSLFDALTKQLGLKLEMQKRPTPVLVIDHINQKPTDN >Mature_558_residues MLFRASVTAVTLLCGVALGQTAGETPAKFDVADVHSSPRTTQPFARGPFYNGGRYELRFATMLDLIHTAYGVDPEKVIGG PNWLEMDRFDVFAKAPAGSSTESRRRMLQALLAERFQLVVHNDSKPIPAFGLKAGKRPLLKETEGAGSGCNFTVENTTPP PAGGGPPQGPINLPVIVYTCKNTTMATFADGMLSMPGAGQYFQNRLVVDQTELGGAWDFTLRFTPKVPAGLATVGENIPL FDALEKQLGLKLEPATIPMPVITVDSVNRKPTENPPDVAASFPPLPTEFDVAEIKPSVTPPGGPGSARPEIKNGRIYLPG IGLKNLIALAWDINGDELMANAPKWLDSERFDVIAKAPAGVAIGDLTPSRTAVPVNIDALRPMLRALLIDRFQMKVHMED RPVAAYTLVAAKPKLKQADPNSRTKWQEGAATDSKDKNANSSLGRLVTCQNVTMAQFAELLPGIAPGYLRTQVVDGTGLE GGFDFTFSFSPAGLFQVNQGRSEDSGAAAGPVPEASLPSGALSLFDALTKQLGLKLEMQKRPTPVLVIDHINQKPTDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59702; Mature: 59702
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFRASVTAVTLLCGVALGQTAGETPAKFDVADVHSSPRTTQPFARGPFYNGGRYELRFA CEEEHHHHHHHHHHHHHHCCCCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCEEEEEHH TMLDLIHTAYGVDPEKVIGGPNWLEMDRFDVFAKAPAGSSTESRRRMLQALLAERFQLVV HHHHHHHHHHCCCHHHHCCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHEEEEE HNDSKPIPAFGLKAGKRPLLKETEGAGSGCNFTVENTTPPPAGGGPPQGPINLPVIVYTC ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEE KNTTMATFADGMLSMPGAGQYFQNRLVVDQTELGGAWDFTLRFTPKVPAGLATVGENIPL CCCEEEHHHCCHHCCCCCCHHHHCCEEEEECCCCCEEEEEEEECCCCCCCHHHHCCCCCH FDALEKQLGLKLEPATIPMPVITVDSVNRKPTENPPDVAASFPPLPTEFDVAEIKPSVTP HHHHHHHHCCEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC PGGPGSARPEIKNGRIYLPGIGLKNLIALAWDINGDELMANAPKWLDSERFDVIAKAPAG CCCCCCCCCCCCCCEEEECCCCHHHEEEEEEECCCCHHCCCCCCCCCCCCCEEEEECCCC VAIGDLTPSRTAVPVNIDALRPMLRALLIDRFQMKVHMEDRPVAAYTLVAAKPKLKQADP EEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEEEECCCCCCCCCC NSRTKWQEGAATDSKDKNANSSLGRLVTCQNVTMAQFAELLPGIAPGYLRTQVVDGTGLE CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCEEEEEECCCCCC GGFDFTFSFSPAGLFQVNQGRSEDSGAAAGPVPEASLPSGALSLFDALTKQLGLKLEMQK CCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECC RPTPVLVIDHINQKPTDN CCCCEEEEECCCCCCCCC >Mature Secondary Structure MLFRASVTAVTLLCGVALGQTAGETPAKFDVADVHSSPRTTQPFARGPFYNGGRYELRFA CEEEHHHHHHHHHHHHHHCCCCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCEEEEEHH TMLDLIHTAYGVDPEKVIGGPNWLEMDRFDVFAKAPAGSSTESRRRMLQALLAERFQLVV HHHHHHHHHHCCCHHHHCCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHEEEEE HNDSKPIPAFGLKAGKRPLLKETEGAGSGCNFTVENTTPPPAGGGPPQGPINLPVIVYTC ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEE KNTTMATFADGMLSMPGAGQYFQNRLVVDQTELGGAWDFTLRFTPKVPAGLATVGENIPL CCCEEEHHHCCHHCCCCCCHHHHCCEEEEECCCCCEEEEEEEECCCCCCCHHHHCCCCCH FDALEKQLGLKLEPATIPMPVITVDSVNRKPTENPPDVAASFPPLPTEFDVAEIKPSVTP HHHHHHHHCCEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC PGGPGSARPEIKNGRIYLPGIGLKNLIALAWDINGDELMANAPKWLDSERFDVIAKAPAG CCCCCCCCCCCCCCEEEECCCCHHHEEEEEEECCCCHHCCCCCCCCCCCCCEEEEECCCC VAIGDLTPSRTAVPVNIDALRPMLRALLIDRFQMKVHMEDRPVAAYTLVAAKPKLKQADP EEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEEEECCCCCCCCCC NSRTKWQEGAATDSKDKNANSSLGRLVTCQNVTMAQFAELLPGIAPGYLRTQVVDGTGLE CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCEEEEEECCCCCC GGFDFTFSFSPAGLFQVNQGRSEDSGAAAGPVPEASLPSGALSLFDALTKQLGLKLEMQK CCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECC RPTPVLVIDHINQKPTDN CCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA