Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622217
Identifier: 116622217
GI number: 116622217
Start: 3940397
End: 3941221
Strand: Reverse
Name: 116622217
Synonym: Acid_3110
Alternate gene names: NA
Gene position: 3941221-3940397 (Counterclockwise)
Preceding gene: 116622218
Following gene: 116622212
Centisome position: 39.55
GC content: 60.61
Gene sequence:
>825_bases ATGAGAAGACCCGCCCGGTTCGCCCTTGTCGGACTGCTCGTGGCCTCCGTCGCACCTGCGGCGGAGCCCGCGGGCTGTGC TGTCCGCAAGGGCCTGTACGATGCCTGGCTCACCTTGAACAAACGAACCACACGGACCTTCCCGAAATTCACCGGGAGTG CTACTCGCGTAGCCGCTGAACCGGCCTCGGCGGAGGAAATTTACCGTGAGTATCAAACCTTCTTTCAGTGCCTGTCCGAT ATGGCGCTGCCGGCGGCCGCCGACAGCAGAAGCGCAATGTGCGCGGATGCCTCGTCAGACCGTTTGGGCTCCCTGACCTG CCAGTTGTCCCTGTACGTCAAAACCGACCGCACCTCCGGGGCGGAGTTGTTGGATGCTTTGCCGGCCAGCAAGAAGGGTG CCGAGATGATTTGGGATCTCGACGCCATCGCGGATGCCGGAGTGGTGGACAAGCATTTTCCGCCGCTCTTCGCTCCCAAA GGGCCGGCGTACAAACTGATCGACGAAGTATTCGTGCTGGCGCTCGACGATCGTGAGACCGCCATCGCCAAGTACTTCCA CATCGTGGGCGCCGCCACCGGAGCAGGTACGCAATACACGGATTCCCAGATCAAAATCCTGCTGCGCGAGTCGCCGATCC TCGTAGTGAAGCACTGGGACATCTTGCGCCAGTACCAACCCAAGTTGAAAAAGCTGCTGGCGGAACTTGCCGCCGAATTG AGCGCACCGGACATGAACAAGGTGCGTCAGGGCATCGCCGGTTCCTGCACCAGGGACAACCTGGATTGTCCGGAGATCCA GAAATTCTTCGGACGGCCGCAATAA
Upstream 100 bases:
>100_bases ACCTTCGGTCAGGTGCTCAGCCAGGCCGATCCTCGTGAATTGCAATTCGGCTTCAAGTTTACGTTCTGATCGGCAGGGTC GGGGCTTTGGAGATAAATGG
Downstream 100 bases:
>100_bases CCGGCCGGCTCGTTATTCGTAGCGCAGCGCCACCAGCGGATCGATGCGCGTGGCCTTGCGCGCGGGAACGTAGCTTGCCA CGGCCGATACGGCGACCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MRRPARFALVGLLVASVAPAAEPAGCAVRKGLYDAWLTLNKRTTRTFPKFTGSATRVAAEPASAEEIYREYQTFFQCLSD MALPAAADSRSAMCADASSDRLGSLTCQLSLYVKTDRTSGAELLDALPASKKGAEMIWDLDAIADAGVVDKHFPPLFAPK GPAYKLIDEVFVLALDDRETAIAKYFHIVGAATGAGTQYTDSQIKILLRESPILVVKHWDILRQYQPKLKKLLAELAAEL SAPDMNKVRQGIAGSCTRDNLDCPEIQKFFGRPQ
Sequences:
>Translated_274_residues MRRPARFALVGLLVASVAPAAEPAGCAVRKGLYDAWLTLNKRTTRTFPKFTGSATRVAAEPASAEEIYREYQTFFQCLSD MALPAAADSRSAMCADASSDRLGSLTCQLSLYVKTDRTSGAELLDALPASKKGAEMIWDLDAIADAGVVDKHFPPLFAPK GPAYKLIDEVFVLALDDRETAIAKYFHIVGAATGAGTQYTDSQIKILLRESPILVVKHWDILRQYQPKLKKLLAELAAEL SAPDMNKVRQGIAGSCTRDNLDCPEIQKFFGRPQ >Mature_274_residues MRRPARFALVGLLVASVAPAAEPAGCAVRKGLYDAWLTLNKRTTRTFPKFTGSATRVAAEPASAEEIYREYQTFFQCLSD MALPAAADSRSAMCADASSDRLGSLTCQLSLYVKTDRTSGAELLDALPASKKGAEMIWDLDAIADAGVVDKHFPPLFAPK GPAYKLIDEVFVLALDDRETAIAKYFHIVGAATGAGTQYTDSQIKILLRESPILVVKHWDILRQYQPKLKKLLAELAAEL SAPDMNKVRQGIAGSCTRDNLDCPEIQKFFGRPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29885; Mature: 29885
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPARFALVGLLVASVAPAAEPAGCAVRKGLYDAWLTLNKRTTRTFPKFTGSATRVAAE CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEECC PASAEEIYREYQTFFQCLSDMALPAAADSRSAMCADASSDRLGSLTCQLSLYVKTDRTSG CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCEEEEEEEEEEEECCCCH AELLDALPASKKGAEMIWDLDAIADAGVVDKHFPPLFAPKGPAYKLIDEVFVLALDDRET HHHHHHCCCCCCCCHHHEEHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCHH AIAKYFHIVGAATGAGTQYTDSQIKILLRESPILVVKHWDILRQYQPKLKKLLAELAAEL HHHHHHHHHHCCCCCCCCCCCHHEEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHC SAPDMNKVRQGIAGSCTRDNLDCPEIQKFFGRPQ CCCCHHHHHHCCCCCCCCCCCCCHHHHHHHCCCC >Mature Secondary Structure MRRPARFALVGLLVASVAPAAEPAGCAVRKGLYDAWLTLNKRTTRTFPKFTGSATRVAAE CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEECC PASAEEIYREYQTFFQCLSDMALPAAADSRSAMCADASSDRLGSLTCQLSLYVKTDRTSG CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCEEEEEEEEEEEECCCCH AELLDALPASKKGAEMIWDLDAIADAGVVDKHFPPLFAPKGPAYKLIDEVFVLALDDRET HHHHHHCCCCCCCCHHHEEHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCHH AIAKYFHIVGAATGAGTQYTDSQIKILLRESPILVVKHWDILRQYQPKLKKLLAELAAEL HHHHHHHHHHCCCCCCCCCCCHHEEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHC SAPDMNKVRQGIAGSCTRDNLDCPEIQKFFGRPQ CCCCHHHHHHCCCCCCCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA