Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622193
Identifier: 116622193
GI number: 116622193
Start: 3901580
End: 3902770
Strand: Reverse
Name: 116622193
Synonym: Acid_3085
Alternate gene names: NA
Gene position: 3902770-3901580 (Counterclockwise)
Preceding gene: 116622197
Following gene: 116622191
Centisome position: 39.16
GC content: 63.14
Gene sequence:
>1191_bases ATGTCCATGGGGCATAACCCGGATTCCATCCGCGCGGAGATGCCTCCTCGCGAAGAGCAAATTCGCGAAGAGTTGGAGCG CGTGCTGGCCAGCCACGAGTTTCGCTCCAGCCGGCGGAGCCAGGAGTTTCTGCGCTACGTGGTGGACCACACCCTGCGCG GCCAGGGCGAAATGCTCAAGGAGCGCACGATCGGAATCGAAGTGTTTGGCCGCCCCTCCAGTTATGACCCGAGCGAAGAC GCCACGGTCCGGGTGAAGGCCGGCGAGGTCCGCAAGCGCCTGGGCATTTACTATTCGGGAGAAGGCGCGCACAATCCGGT TCGGATCGAGCTACCCTCGGGAACTTACGTTCCGGAATTTCGAAGGGGGAGCCATCTGGAGGCGGTGGTGCTGCCGCTCC CGGTGTCGCCGGTTACCTCCGGACACCGCCTGACGGCAGGCCGCGTGATTGCAGCTGCCGCCATTCTGGCCGCAGTGGCG CTGGTTGCCTGGTTCGCGCCGTGGAAACCCGCGAGCGCACTGGATCGTTTCTGGTCGCCCGTTCTCAGCGGGAACTCGCC GGTGTTGGTGTGTGCGGCGTATGTCCCGGTATGGGGTCTGGATCGCGATCCTAGCTCGACGCAGCCGCTCCGGGTGGAAG ACTTCGTCCCATTGAACGACCAGTTCGTGGGAGGCGGCGATCTGGTGGCGACCTCCCGGCTCACTGCGATGCTGACGCGG ATGCGGCAACCCTTCCGGCTGAAGGTTGGGAATGACGTCTCCTTCGCCGATCTGCGATCGGGGCCGGCGATCCTGGTGGG CTACTCCTACACGAGATGGAAGGAGATCAGCCGGCAGATGCGGTACTTCATCGAAGTAGCTCCGGGTTTTGCGGGCGTTA CGGACAACGGCAGACGGACCGAATGGGCAATCGCAAACCTGCCGCGCGACCGAAGGACCGACGAAGATTACGCGATCGTG ACGCGGGTCTTCCATCCCGATACGCACGCCATGCTGGTGGAGGTGGCGGGGATCACGCAATACGGGACGGACGCAGCGGG GGACCTGGTGACCAACACGGAGCTGATGAAGGAGGAGTTTCAGAAGGCTCCGGCCGGATGGCAGGGAAGGAACCTTCAAC TGGTCCTTAAGGTAAAGGTCATTGCGGGTGCGCCGAGTTCTCCCAAGGTTGTGGGTAGGCATTTCTGGTAG
Upstream 100 bases:
>100_bases TGCGGAGGGTGTTGCAGGTTGTTCGTAACATGGCCGAACGTAGTGTGTTTTCAATAAGCTTAGGGTGGAACGGAAATGTT AGAATCGGACCAGTAAAAAC
Downstream 100 bases:
>100_bases CGCCGGAGTGAGGGCGCGGCGCGCGGTCGGCGGGGTGTCGAGCGTGAACGAAGGAGCCGCCTGAAAGGCGGCTGCAGGCA GGATTGCCTGCCCCACAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MSMGHNPDSIRAEMPPREEQIREELERVLASHEFRSSRRSQEFLRYVVDHTLRGQGEMLKERTIGIEVFGRPSSYDPSED ATVRVKAGEVRKRLGIYYSGEGAHNPVRIELPSGTYVPEFRRGSHLEAVVLPLPVSPVTSGHRLTAGRVIAAAAILAAVA LVAWFAPWKPASALDRFWSPVLSGNSPVLVCAAYVPVWGLDRDPSSTQPLRVEDFVPLNDQFVGGGDLVATSRLTAMLTR MRQPFRLKVGNDVSFADLRSGPAILVGYSYTRWKEISRQMRYFIEVAPGFAGVTDNGRRTEWAIANLPRDRRTDEDYAIV TRVFHPDTHAMLVEVAGITQYGTDAAGDLVTNTELMKEEFQKAPAGWQGRNLQLVLKVKVIAGAPSSPKVVGRHFW
Sequences:
>Translated_396_residues MSMGHNPDSIRAEMPPREEQIREELERVLASHEFRSSRRSQEFLRYVVDHTLRGQGEMLKERTIGIEVFGRPSSYDPSED ATVRVKAGEVRKRLGIYYSGEGAHNPVRIELPSGTYVPEFRRGSHLEAVVLPLPVSPVTSGHRLTAGRVIAAAAILAAVA LVAWFAPWKPASALDRFWSPVLSGNSPVLVCAAYVPVWGLDRDPSSTQPLRVEDFVPLNDQFVGGGDLVATSRLTAMLTR MRQPFRLKVGNDVSFADLRSGPAILVGYSYTRWKEISRQMRYFIEVAPGFAGVTDNGRRTEWAIANLPRDRRTDEDYAIV TRVFHPDTHAMLVEVAGITQYGTDAAGDLVTNTELMKEEFQKAPAGWQGRNLQLVLKVKVIAGAPSSPKVVGRHFW >Mature_395_residues SMGHNPDSIRAEMPPREEQIREELERVLASHEFRSSRRSQEFLRYVVDHTLRGQGEMLKERTIGIEVFGRPSSYDPSEDA TVRVKAGEVRKRLGIYYSGEGAHNPVRIELPSGTYVPEFRRGSHLEAVVLPLPVSPVTSGHRLTAGRVIAAAAILAAVAL VAWFAPWKPASALDRFWSPVLSGNSPVLVCAAYVPVWGLDRDPSSTQPLRVEDFVPLNDQFVGGGDLVATSRLTAMLTRM RQPFRLKVGNDVSFADLRSGPAILVGYSYTRWKEISRQMRYFIEVAPGFAGVTDNGRRTEWAIANLPRDRRTDEDYAIVT RVFHPDTHAMLVEVAGITQYGTDAAGDLVTNTELMKEEFQKAPAGWQGRNLQLVLKVKVIAGAPSSPKVVGRHFW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44032; Mature: 43901
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMGHNPDSIRAEMPPREEQIREELERVLASHEFRSSRRSQEFLRYVVDHTLRGQGEMLK CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ERTIGIEVFGRPSSYDPSEDATVRVKAGEVRKRLGIYYSGEGAHNPVRIELPSGTYVPEF HHCCEEEEECCCCCCCCCCCCEEEEEHHHHHHHHCEEECCCCCCCCEEEECCCCCCCCCC RRGSHLEAVVLPLPVSPVTSGHRLTAGRVIAAAAILAAVALVAWFAPWKPASALDRFWSP CCCCCCEEEEEECCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VLSGNSPVLVCAAYVPVWGLDRDPSSTQPLRVEDFVPLNDQFVGGGDLVATSRLTAMLTR HHCCCCCEEEEEEECCEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH MRQPFRLKVGNDVSFADLRSGPAILVGYSYTRWKEISRQMRYFIEVAPGFAGVTDNGRRT CCCCEEEEECCCCCHHHHCCCCEEEEECCHHHHHHHHHHHHHHHEECCCCCCCCCCCCEE EWAIANLPRDRRTDEDYAIVTRVFHPDTHAMLVEVAGITQYGTDAAGDLVTNTELMKEEF EEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHCCHHHHHHHH QKAPAGWQGRNLQLVLKVKVIAGAPSSPKVVGRHFW HHCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure SMGHNPDSIRAEMPPREEQIREELERVLASHEFRSSRRSQEFLRYVVDHTLRGQGEMLK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ERTIGIEVFGRPSSYDPSEDATVRVKAGEVRKRLGIYYSGEGAHNPVRIELPSGTYVPEF HHCCEEEEECCCCCCCCCCCCEEEEEHHHHHHHHCEEECCCCCCCCEEEECCCCCCCCCC RRGSHLEAVVLPLPVSPVTSGHRLTAGRVIAAAAILAAVALVAWFAPWKPASALDRFWSP CCCCCCEEEEEECCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VLSGNSPVLVCAAYVPVWGLDRDPSSTQPLRVEDFVPLNDQFVGGGDLVATSRLTAMLTR HHCCCCCEEEEEEECCEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH MRQPFRLKVGNDVSFADLRSGPAILVGYSYTRWKEISRQMRYFIEVAPGFAGVTDNGRRT CCCCEEEEECCCCCHHHHCCCCEEEEECCHHHHHHHHHHHHHHHEECCCCCCCCCCCCEE EWAIANLPRDRRTDEDYAIVTRVFHPDTHAMLVEVAGITQYGTDAAGDLVTNTELMKEEF EEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHCCHHHHHHHH QKAPAGWQGRNLQLVLKVKVIAGAPSSPKVVGRHFW HHCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA