Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622180
Identifier: 116622180
GI number: 116622180
Start: 3880197
End: 3881057
Strand: Direct
Name: 116622180
Synonym: Acid_3072
Alternate gene names: NA
Gene position: 3880197-3881057 (Clockwise)
Preceding gene: 116622174
Following gene: 116622181
Centisome position: 38.94
GC content: 62.25
Gene sequence:
>861_bases ATGTCTAGCCTGCGAACCGCTCTTATCTTTGCCGCCTTGCCATTGACTCTGTACGCACAGACCGGAGGCGGGGCTCCCCT GCCGCAGGGCCAAAACCCAAACGGCATGCACGTGTACATCTGGGCCGGCCTCAAAAGCCACGGCGAAGGGCTTCACGATT ACCCGCAATTTCTCGCCGACTGGAGTAAGGTTCTTACCCAGCACGGGGCCGTGGTCGATGGCGCGCTGCACGCTCCGCGC AGCGCCGACCTCGACCGTGCGGACGTCGTGGTGATCTACAAAGGAGACGCCGGGTACCTTAACGACACCGACAAGGCGGC GCTCGACGCCTATGTCGCAAGAGGCGGCGGGCTGGTCAGCATACACGATTCGCTGTGCGGCCCGGACCCTGCCTATTTCG CGTCGCTGGTGGGAGCAGCCAAGAAACACGGCGAGGTGAACTACACCCTCGAAGCGCCGATTCATTACACCATCGTGGAC AAGGCGAGCCCCATCATGAAGGACATGCCGGAGCTCACGATTAACGACGAGGCATTCTACACCCTCACCTGGGCCAAGAC CGGCACGGTTCACGTGCTGGCGACCAACGAGATTCCGGGGACGCCCAGCGCGGGCACGCACAAGGGAGAAATCGTGCCGC AGATCTGGACCTACGAACATCCGGCTGCGGGTGGAAAGCAGGCGCGCGCCTTTGTGTGGATGCAAGGACACACTTACGCG AATTTCGCCAACGAGCCGATCCAGAAGATGCTGTTGCGCGGTATCGCCTGGGCCGGTAACAAGCCGGTTGATGAGCTGCT GACCTATACACCGCCGCCTCGACGCGGCCACGGTGGCGCGCCTGACCCTTCCAAGAAGTAG
Upstream 100 bases:
>100_bases CCGGCGACTCTCAGCGAGCGCCATCATCGCTCGCGACGAAAATCGTGTGTGGCTGTCGCGGTTCGGTGATATATTAACCT CGTTTATCGGATCAGTCCTT
Downstream 100 bases:
>100_bases CGCCGTTCGGAGCCGGGCGCGCCGGCAAGCGTCCGGTAATTCGCATTGATCTCGTAAACTCGCAGCCGGAATTTCACGGA GAAGGAAAACGAGCGGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSSLRTALIFAALPLTLYAQTGGGAPLPQGQNPNGMHVYIWAGLKSHGEGLHDYPQFLADWSKVLTQHGAVVDGALHAPR SADLDRADVVVIYKGDAGYLNDTDKAALDAYVARGGGLVSIHDSLCGPDPAYFASLVGAAKKHGEVNYTLEAPIHYTIVD KASPIMKDMPELTINDEAFYTLTWAKTGTVHVLATNEIPGTPSAGTHKGEIVPQIWTYEHPAAGGKQARAFVWMQGHTYA NFANEPIQKMLLRGIAWAGNKPVDELLTYTPPPRRGHGGAPDPSKK
Sequences:
>Translated_286_residues MSSLRTALIFAALPLTLYAQTGGGAPLPQGQNPNGMHVYIWAGLKSHGEGLHDYPQFLADWSKVLTQHGAVVDGALHAPR SADLDRADVVVIYKGDAGYLNDTDKAALDAYVARGGGLVSIHDSLCGPDPAYFASLVGAAKKHGEVNYTLEAPIHYTIVD KASPIMKDMPELTINDEAFYTLTWAKTGTVHVLATNEIPGTPSAGTHKGEIVPQIWTYEHPAAGGKQARAFVWMQGHTYA NFANEPIQKMLLRGIAWAGNKPVDELLTYTPPPRRGHGGAPDPSKK >Mature_285_residues SSLRTALIFAALPLTLYAQTGGGAPLPQGQNPNGMHVYIWAGLKSHGEGLHDYPQFLADWSKVLTQHGAVVDGALHAPRS ADLDRADVVVIYKGDAGYLNDTDKAALDAYVARGGGLVSIHDSLCGPDPAYFASLVGAAKKHGEVNYTLEAPIHYTIVDK ASPIMKDMPELTINDEAFYTLTWAKTGTVHVLATNEIPGTPSAGTHKGEIVPQIWTYEHPAAGGKQARAFVWMQGHTYAN FANEPIQKMLLRGIAWAGNKPVDELLTYTPPPRRGHGGAPDPSKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30684; Mature: 30553
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLRTALIFAALPLTLYAQTGGGAPLPQGQNPNGMHVYIWAGLKSHGEGLHDYPQFLAD CCHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHH WSKVLTQHGAVVDGALHAPRSADLDRADVVVIYKGDAGYLNDTDKAALDAYVARGGGLVS HHHHHHHCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEE IHDSLCGPDPAYFASLVGAAKKHGEVNYTLEAPIHYTIVDKASPIMKDMPELTINDEAFY ECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCCCHHHHCCCCEEECCCEEE TLTWAKTGTVHVLATNEIPGTPSAGTHKGEIVPQIWTYEHPAAGGKQARAFVWMQGHTYA EEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCEEC NFANEPIQKMLLRGIAWAGNKPVDELLTYTPPPRRGHGGAPDPSKK CCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SSLRTALIFAALPLTLYAQTGGGAPLPQGQNPNGMHVYIWAGLKSHGEGLHDYPQFLAD CHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHH WSKVLTQHGAVVDGALHAPRSADLDRADVVVIYKGDAGYLNDTDKAALDAYVARGGGLVS HHHHHHHCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEE IHDSLCGPDPAYFASLVGAAKKHGEVNYTLEAPIHYTIVDKASPIMKDMPELTINDEAFY ECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCCCHHHHCCCCEEECCCEEE TLTWAKTGTVHVLATNEIPGTPSAGTHKGEIVPQIWTYEHPAAGGKQARAFVWMQGHTYA EEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCEEC NFANEPIQKMLLRGIAWAGNKPVDELLTYTPPPRRGHGGAPDPSKK CCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA