Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622165
Identifier: 116622165
GI number: 116622165
Start: 3856925
End: 3857731
Strand: Reverse
Name: 116622165
Synonym: Acid_3057
Alternate gene names: NA
Gene position: 3857731-3856925 (Counterclockwise)
Preceding gene: 116622166
Following gene: 116622164
Centisome position: 38.71
GC content: 59.98
Gene sequence:
>807_bases ATGGATGCCGGGACTGCCTATTCGCTGATTGTGACCCTGGCCTCCACCGGGGTTTTCATCGCTTCCGTGGAACTTCTCGC CCTGAAGAGCGAATTCGAGGATGGCGGACTCTTCGGGTGGGAAGTGCTCCGAACCGTTTCCCGAGCGACGCTCTACGTTG GTTCCGGCAGGCCGAGGCAGCTGATTTCGCACCCGTTCTTTGTGCCCACGGTCGCAGGCGCCAGGGCGCTCGCAGCCCTG ACCCTTATCCTTTTTCGCAACCACCACGCGCTGAGCACAGCCTGCGTCCTGGCCGTAATTACCGCGACCATTTTGATGTA CTGGCGTGCGCCGTTCGGCCTGGATGGCTCTGACCAGATGTTCCTCATCACGTTTGTTGCGGTCGGAATCCACAAGCTCT TTTCGGCGGACGTCCACATCGGGCAAGCGTCGTTGTGGTTCATCGCGATCCAGGGCTGCCTTTCCTATTGCGTGGCCGGC GTTGCAAAAGTCATTTCGCCGGTGTGGCGGAGCGGCGAGGCAGTGCGCAGGATCATGGGCACTCGAACCTACGGCACAAG CAGATCCGCATCTTTCGTGAGTGGCCGCGCAGGCACGTGCCTTGCACTCTCGTGGCTGCTGATGTTGTTCGAGTGCACCT TCCCACTGGCTCTGGCTTTCGGAGAAACCGGCTTCGCCGTGTTCGCGGTTATGGGCATCTTCTTCCACATTGCCAATGCC GCGATCATGGGCCTCAACACTTTCGTCTGGGCCTTCGTCGCCACCTATCCCGCGATTCTCTTCTGCGCCGTAAGCATCAG GCATTGA
Upstream 100 bases:
>100_bases CCACGCAATTCATGGTGCTGGAACATGACGGTTACTCCGGCGAGCCGGAACGCAGCCGGGTACTCATGATGTCCGGCGTT CATAGGCTGCGGTGATCGCC
Downstream 100 bases:
>100_bases GGCGCTCTTCCCACAGTGCGTCTGATTGAAAATTTCGATTTTCCTCCTAACCATGCTGAGTAGTCCGCCGTCCTATAATC AGACCGTCTATGGGAACAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MDAGTAYSLIVTLASTGVFIASVELLALKSEFEDGGLFGWEVLRTVSRATLYVGSGRPRQLISHPFFVPTVAGARALAAL TLILFRNHHALSTACVLAVITATILMYWRAPFGLDGSDQMFLITFVAVGIHKLFSADVHIGQASLWFIAIQGCLSYCVAG VAKVISPVWRSGEAVRRIMGTRTYGTSRSASFVSGRAGTCLALSWLLMLFECTFPLALAFGETGFAVFAVMGIFFHIANA AIMGLNTFVWAFVATYPAILFCAVSIRH
Sequences:
>Translated_268_residues MDAGTAYSLIVTLASTGVFIASVELLALKSEFEDGGLFGWEVLRTVSRATLYVGSGRPRQLISHPFFVPTVAGARALAAL TLILFRNHHALSTACVLAVITATILMYWRAPFGLDGSDQMFLITFVAVGIHKLFSADVHIGQASLWFIAIQGCLSYCVAG VAKVISPVWRSGEAVRRIMGTRTYGTSRSASFVSGRAGTCLALSWLLMLFECTFPLALAFGETGFAVFAVMGIFFHIANA AIMGLNTFVWAFVATYPAILFCAVSIRH >Mature_268_residues MDAGTAYSLIVTLASTGVFIASVELLALKSEFEDGGLFGWEVLRTVSRATLYVGSGRPRQLISHPFFVPTVAGARALAAL TLILFRNHHALSTACVLAVITATILMYWRAPFGLDGSDQMFLITFVAVGIHKLFSADVHIGQASLWFIAIQGCLSYCVAG VAKVISPVWRSGEAVRRIMGTRTYGTSRSASFVSGRAGTCLALSWLLMLFECTFPLALAFGETGFAVFAVMGIFFHIANA AIMGLNTFVWAFVATYPAILFCAVSIRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28850; Mature: 28850
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAGTAYSLIVTLASTGVFIASVELLALKSEFEDGGLFGWEVLRTVSRATLYVGSGRPRQ CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEECCCCCHH LISHPFFVPTVAGARALAALTLILFRNHHALSTACVLAVITATILMYWRAPFGLDGSDQM HHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH FLITFVAVGIHKLFSADVHIGQASLWFIAIQGCLSYCVAGVAKVISPVWRSGEAVRRIMG HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHC TRTYGTSRSASFVSGRAGTCLALSWLLMLFECTFPLALAFGETGFAVFAVMGIFFHIANA CCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AIMGLNTFVWAFVATYPAILFCAVSIRH HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDAGTAYSLIVTLASTGVFIASVELLALKSEFEDGGLFGWEVLRTVSRATLYVGSGRPRQ CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEECCCCCHH LISHPFFVPTVAGARALAALTLILFRNHHALSTACVLAVITATILMYWRAPFGLDGSDQM HHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH FLITFVAVGIHKLFSADVHIGQASLWFIAIQGCLSYCVAGVAKVISPVWRSGEAVRRIMG HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHC TRTYGTSRSASFVSGRAGTCLALSWLLMLFECTFPLALAFGETGFAVFAVMGIFFHIANA CCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AIMGLNTFVWAFVATYPAILFCAVSIRH HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA