Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622128
Identifier: 116622128
GI number: 116622128
Start: 3816292
End: 3817518
Strand: Direct
Name: 116622128
Synonym: Acid_3016
Alternate gene names: NA
Gene position: 3816292-3817518 (Clockwise)
Preceding gene: 116622127
Following gene: 116622129
Centisome position: 38.29
GC content: 60.72
Gene sequence:
>1227_bases ATGAGTGAGCGTCTCGACATTGTGATCCTCGGACTTTCGGTGACCTCCTCGTGGGGCAACGGGCACGCGACCACTTATCG CAGCCTGATCCGCGCACTGGCGGACCGCGGGCATCGCGTGCTGTTCCTGGAGCGCGATGCTCCCTGGTACAAGGGCAATC GCGACCAGCCGCGTCCTGCGGGTGCGCGCACTGAATTGTACGAGAGCTTCGACGAACTGGTGGCGCGGTTTGAAGGTGAG GTAGCTTCGGCCGGACTGGTGATCGTCGGTTCGTTCGTTCCGGAAGGGCGGAGAGTGGGCGAGTGGGTCACGAGCGTGGC GCGCGGAGTAACCGCCTTTTACGACATTGATACGCCGATCACGCTGGCGCTGCTCGCCGAAGGCATTCACGAATTCATTT CTCCCGAGCTGATCCGGCGCTACGAATTGTATCTCTCCTTCACCGGCGGACCTACTTTGCGCATGATCGAGAATCGATAC GGATCTCCGATGGCGCGTGCGTTCTATTGCGCGGTCGATCTCGAACTTTACCGTCCGGAGAAATGCTCCGAACGGTGGGA TCTGGGATATCTGGGCACGTATAGCGACGATCGCCAGCCCTCGTTAAACGAACTAATGCTGGAGGCGGCGCGAATATGGC CGCAAGGGCGCTTCGCCGTGGTGGGTCCGATGTATCCGCTGGAGATTCGCTGGCCGGCGAATGTGGATCGCGAAATTCAC TTGTCTCCGTCGGACCATGCGGAGTTCTATGGATCGCAGCGATTCACGCTGAACATCACGCGCGAGGCGATGAAGCGAGT GGGCTATGCGCCGAGCGTGCGGTTGTTCGAGGCAGGCGCATGCGGCGTGCCGATAATCAGTGACTGGTGGGAAGGGCTGG ATACGCTGTTTCAGTTGGGCGACGAAGTACTGATCTCTTCGAACGCGACGGACACACTACGCTTCTTACGGGAATATCCC GACGCCAAGCGGCGCCAAGTGGGATTGGCCGCGCGCCGCCGCATATTGACGGAGCATACGCCACAACAGCGCGTGGCGCA GTTAGAGGGCTATCTGGAGGAGGTTCATGACAACCTTTCTGCTCATCCGGCACGGCGAAACGGATGCGAACGGCAGATGG CTCGCGGGCTGGACTCCGGGACTCCATCTCAATGCCCGGGGCAGACAGCAAGCGCACGGACTGGCGGAGAGGCTGGCGAT GCAGCCATTAGCGGCCGTTTACACTAG
Upstream 100 bases:
>100_bases AGGCCGCGCTGCGACGCGTCCTGGCGGCACACACGTACTCGAACCGTGCAGCGCTGGTGGAATTCGTACTGGAAGGAAAA TCCGCGGTTGGGGCGGGCTT
Downstream 100 bases:
>100_bases CCCGCTGGAGCGGGCGCTTGAGACCGCGCAGCCGATTGCGGCTCGGCATGCGCTGGTGCCGTGCCCTGTTGAGGGACTGG GCGAATTGCAATTCGGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MSERLDIVILGLSVTSSWGNGHATTYRSLIRALADRGHRVLFLERDAPWYKGNRDQPRPAGARTELYESFDELVARFEGE VASAGLVIVGSFVPEGRRVGEWVTSVARGVTAFYDIDTPITLALLAEGIHEFISPELIRRYELYLSFTGGPTLRMIENRY GSPMARAFYCAVDLELYRPEKCSERWDLGYLGTYSDDRQPSLNELMLEAARIWPQGRFAVVGPMYPLEIRWPANVDREIH LSPSDHAEFYGSQRFTLNITREAMKRVGYAPSVRLFEAGACGVPIISDWWEGLDTLFQLGDEVLISSNATDTLRFLREYP DAKRRQVGLAARRRILTEHTPQQRVAQLEGYLEEVHDNLSAHPARRNGCERQMARGLDSGTPSQCPGQTASARTGGEAGD AAISGRLH
Sequences:
>Translated_408_residues MSERLDIVILGLSVTSSWGNGHATTYRSLIRALADRGHRVLFLERDAPWYKGNRDQPRPAGARTELYESFDELVARFEGE VASAGLVIVGSFVPEGRRVGEWVTSVARGVTAFYDIDTPITLALLAEGIHEFISPELIRRYELYLSFTGGPTLRMIENRY GSPMARAFYCAVDLELYRPEKCSERWDLGYLGTYSDDRQPSLNELMLEAARIWPQGRFAVVGPMYPLEIRWPANVDREIH LSPSDHAEFYGSQRFTLNITREAMKRVGYAPSVRLFEAGACGVPIISDWWEGLDTLFQLGDEVLISSNATDTLRFLREYP DAKRRQVGLAARRRILTEHTPQQRVAQLEGYLEEVHDNLSAHPARRNGCERQMARGLDSGTPSQCPGQTASARTGGEAGD AAISGRLH >Mature_407_residues SERLDIVILGLSVTSSWGNGHATTYRSLIRALADRGHRVLFLERDAPWYKGNRDQPRPAGARTELYESFDELVARFEGEV ASAGLVIVGSFVPEGRRVGEWVTSVARGVTAFYDIDTPITLALLAEGIHEFISPELIRRYELYLSFTGGPTLRMIENRYG SPMARAFYCAVDLELYRPEKCSERWDLGYLGTYSDDRQPSLNELMLEAARIWPQGRFAVVGPMYPLEIRWPANVDREIHL SPSDHAEFYGSQRFTLNITREAMKRVGYAPSVRLFEAGACGVPIISDWWEGLDTLFQLGDEVLISSNATDTLRFLREYPD AKRRQVGLAARRRILTEHTPQQRVAQLEGYLEEVHDNLSAHPARRNGCERQMARGLDSGTPSQCPGQTASARTGGEAGDA AISGRLH
Specific function: Unknown
COG id: COG4641
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45754; Mature: 45623
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERLDIVILGLSVTSSWGNGHATTYRSLIRALADRGHRVLFLERDAPWYKGNRDQPRPA CCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC GARTELYESFDELVARFEGEVASAGLVIVGSFVPEGRRVGEWVTSVARGVTAFYDIDTPI CHHHHHHHHHHHHHHHHCCCHHCCCEEEEECCCCCCHHHHHHHHHHHHHHEEEEECCCHH TLALLAEGIHEFISPELIRRYELYLSFTGGPTLRMIENRYGSPMARAFYCAVDLELYRPE HHHHHHHHHHHHHCHHHHHHEEEEEEECCCCEEHHHHHHCCCHHHHHEEEEEEEEEECCH KCSERWDLGYLGTYSDDRQPSLNELMLEAARIWPQGRFAVVGPMYPLEIRWPANVDREIH HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCEEE LSPSDHAEFYGSQRFTLNITREAMKRVGYAPSVRLFEAGACGVPIISDWWEGLDTLFQLG ECCCCHHHHCCCCEEEEEEHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCC DEVLISSNATDTLRFLREYPDAKRRQVGLAARRRILTEHTPQQRVAQLEGYLEEVHDNLS CCEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC AHPARRNGCERQMARGLDSGTPSQCPGQTASARTGGEAGDAAISGRLH CCCHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SERLDIVILGLSVTSSWGNGHATTYRSLIRALADRGHRVLFLERDAPWYKGNRDQPRPA CCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC GARTELYESFDELVARFEGEVASAGLVIVGSFVPEGRRVGEWVTSVARGVTAFYDIDTPI CHHHHHHHHHHHHHHHHCCCHHCCCEEEEECCCCCCHHHHHHHHHHHHHHEEEEECCCHH TLALLAEGIHEFISPELIRRYELYLSFTGGPTLRMIENRYGSPMARAFYCAVDLELYRPE HHHHHHHHHHHHHCHHHHHHEEEEEEECCCCEEHHHHHHCCCHHHHHEEEEEEEEEECCH KCSERWDLGYLGTYSDDRQPSLNELMLEAARIWPQGRFAVVGPMYPLEIRWPANVDREIH HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCEEE LSPSDHAEFYGSQRFTLNITREAMKRVGYAPSVRLFEAGACGVPIISDWWEGLDTLFQLG ECCCCHHHHCCCCEEEEEEHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCC DEVLISSNATDTLRFLREYPDAKRRQVGLAARRRILTEHTPQQRVAQLEGYLEEVHDNLS CCEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC AHPARRNGCERQMARGLDSGTPSQCPGQTASARTGGEAGDAAISGRLH CCCHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA