The gene/protein map for NC_008536 is currently unavailable.
Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

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The map label for this gene is yxnA [H]

Identifier: 116622118

GI number: 116622118

Start: 3804029

End: 3804925

Strand: Direct

Name: yxnA [H]

Synonym: Acid_3006

Alternate gene names: 116622118

Gene position: 3804029-3804925 (Clockwise)

Preceding gene: 116622117

Following gene: 116622119

Centisome position: 38.17

GC content: 61.65

Gene sequence:

>897_bases
ATGTCAGATCGTGAACTCAAAGGAATGGTAGTCGTCATTACCGGTGCATCGAGCGGCTTTGGAAAGGGCTGTTCGTTGCG
CTTCGCGCGCGAGGGTTGCACGGTTGTGCTAGCCGCCCGCCGCGACCAATTGCTCGACAGGTTGGCCCAGGAATGCGAAG
CCTTCGGTAACCCCGCGCTGCCGGTCCCGACAGATGTCAGCCTTGCCGAGGACGTAGCTGGCCTGGCGGAGCGCGCGCTC
GGCGAATTCGGGCGCATCGACGTCTGGGTCAACAACGCCGGCGCGGGTGCAATCGGGCGCTTTGAAGATGTTCCCCTGGA
AGATCACGTAAAGGTCATCCAAACGGATCTGCTCGGAACGCTATACGGCAGCTACTTCGCCATGACGGAGTTCCGCCGTC
AGGGGCAGGGCACGTTGATCAACCTCGCTTCGGTGATCGGCAAAGTTCCCTCACCCTACTTTGCCTCCTACGCGGCGGCG
AAGCATGGTGTGGTAGGACTCAGTGCGTCCCTGCGGCAGGAACTCGAGCAGGACCAAATCGACACCATCCGTGTATGCAC
GGTGATGCCGACTACGTTCGACACGCCGTTTTTCGAGCACGCGGCGCAGTATTCGGGAAAAGAGGCGAGCCCGATCCCGC
CGACCTATGACCCCTCGGAAGTCGTCGACACCATCGTGTCTCTGGCCAAAGATCCGAAGGATGAGGTCTCCGTGGGTACA
GCGGCGAAGGTGGCGACCTTCGCGCACCAGTTCTTCCCCGGGATGGTAGAAGCGATGATGGCCCGGCAGACGCGAAAGGC
GGAGTTCGACGAAGCCACGACCGGGGAACACACGAGCGGCAGCCTGCATGAACCCATGCCGACCGGAACCTCGATCGGCG
GCGGGTGGAAGAAATGA

Upstream 100 bases:

>100_bases
TGCAGGCCGGGGCAAACGCAGATAAGCCTGCTGATAGATATGCACGGCTTCACAAGGGACTCCCATTTGCGGTGTGAAGC
TCATCCAAGGAGAAACTTGC

Downstream 100 bases:

>100_bases
GCCCCGGCGCGGTCTTGATTACGCTAGCGCTCGGCGCGGCAGCGGGTGCGGCAGATCTCGAAGTGGTTCACCAGTTCCAG
GGACCAATGCCGACCGGCGT

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSDRELKGMVVVITGASSGFGKGCSLRFAREGCTVVLAARRDQLLDRLAQECEAFGNPALPVPTDVSLAEDVAGLAERAL
GEFGRIDVWVNNAGAGAIGRFEDVPLEDHVKVIQTDLLGTLYGSYFAMTEFRRQGQGTLINLASVIGKVPSPYFASYAAA
KHGVVGLSASLRQELEQDQIDTIRVCTVMPTTFDTPFFEHAAQYSGKEASPIPPTYDPSEVVDTIVSLAKDPKDEVSVGT
AAKVATFAHQFFPGMVEAMMARQTRKAEFDEATTGEHTSGSLHEPMPTGTSIGGGWKK

Sequences:

>Translated_298_residues
MSDRELKGMVVVITGASSGFGKGCSLRFAREGCTVVLAARRDQLLDRLAQECEAFGNPALPVPTDVSLAEDVAGLAERAL
GEFGRIDVWVNNAGAGAIGRFEDVPLEDHVKVIQTDLLGTLYGSYFAMTEFRRQGQGTLINLASVIGKVPSPYFASYAAA
KHGVVGLSASLRQELEQDQIDTIRVCTVMPTTFDTPFFEHAAQYSGKEASPIPPTYDPSEVVDTIVSLAKDPKDEVSVGT
AAKVATFAHQFFPGMVEAMMARQTRKAEFDEATTGEHTSGSLHEPMPTGTSIGGGWKK
>Mature_297_residues
SDRELKGMVVVITGASSGFGKGCSLRFAREGCTVVLAARRDQLLDRLAQECEAFGNPALPVPTDVSLAEDVAGLAERALG
EFGRIDVWVNNAGAGAIGRFEDVPLEDHVKVIQTDLLGTLYGSYFAMTEFRRQGQGTLINLASVIGKVPSPYFASYAAAK
HGVVGLSASLRQELEQDQIDTIRVCTVMPTTFDTPFFEHAAQYSGKEASPIPPTYDPSEVVDTIVSLAKDPKDEVSVGTA
AKVATFAHQFFPGMVEAMMARQTRKAEFDEATTGEHTSGSLHEPMPTGTSIGGGWKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7706318, Length=275, Percent_Identity=27.2727272727273, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI20149619, Length=273, Percent_Identity=28.5714285714286, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI142976729, Length=270, Percent_Identity=23.3333333333333, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI4758504, Length=248, Percent_Identity=30.6451612903226, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI157739938, Length=276, Percent_Identity=27.536231884058, Blast_Score=85, Evalue=9e-17,
Organism=Homo sapiens, GI40254986, Length=183, Percent_Identity=29.5081967213115, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI4503817, Length=243, Percent_Identity=25.9259259259259, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI210032110, Length=259, Percent_Identity=22.7799227799228, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI40254992, Length=223, Percent_Identity=27.3542600896861, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI19923817, Length=190, Percent_Identity=28.4210526315789, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI83715985, Length=244, Percent_Identity=28.6885245901639, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI15277342, Length=258, Percent_Identity=29.4573643410853, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI38348362, Length=185, Percent_Identity=27.5675675675676, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI109715829, Length=241, Percent_Identity=26.5560165975104, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI209862901, Length=207, Percent_Identity=28.5024154589372, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI19923983, Length=207, Percent_Identity=28.5024154589372, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI38424085, Length=186, Percent_Identity=27.4193548387097, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI4504505, Length=182, Percent_Identity=31.3186813186813, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI32483357, Length=212, Percent_Identity=26.8867924528302, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI31542939, Length=249, Percent_Identity=24.8995983935743, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI224922801, Length=187, Percent_Identity=26.7379679144385, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI5031737, Length=202, Percent_Identity=28.7128712871287, Blast_Score=65, Evalue=9e-11,
Organism=Escherichia coli, GI87082100, Length=239, Percent_Identity=31.7991631799163, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1788459, Length=212, Percent_Identity=32.0754716981132, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1789208, Length=243, Percent_Identity=28.8065843621399, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787905, Length=143, Percent_Identity=26.5734265734266, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1787335, Length=230, Percent_Identity=27.3913043478261, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1787820, Length=185, Percent_Identity=29.7297297297297, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786812, Length=250, Percent_Identity=26.4, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71997402, Length=269, Percent_Identity=26.7657992565056, Blast_Score=94, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI193203115, Length=223, Percent_Identity=27.3542600896861, Blast_Score=88, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI193203117, Length=222, Percent_Identity=27.4774774774775, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17570069, Length=267, Percent_Identity=25.8426966292135, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17508895, Length=277, Percent_Identity=27.0758122743682, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17562908, Length=248, Percent_Identity=28.2258064516129, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17531453, Length=248, Percent_Identity=28.6290322580645, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17562906, Length=248, Percent_Identity=28.6290322580645, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17564282, Length=228, Percent_Identity=25, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17560150, Length=250, Percent_Identity=29.6, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17568967, Length=193, Percent_Identity=29.0155440414508, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71982365, Length=192, Percent_Identity=26.5625, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17562904, Length=246, Percent_Identity=28.0487804878049, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17538480, Length=263, Percent_Identity=28.1368821292776, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17551412, Length=219, Percent_Identity=30.5936073059361, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17507613, Length=204, Percent_Identity=27.4509803921569, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17544670, Length=267, Percent_Identity=25.4681647940075, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI32563809, Length=207, Percent_Identity=27.0531400966184, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI25147288, Length=243, Percent_Identity=27.1604938271605, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193204405, Length=243, Percent_Identity=29.2181069958848, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17562990, Length=257, Percent_Identity=28.7937743190661, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17538182, Length=208, Percent_Identity=29.3269230769231, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17561402, Length=199, Percent_Identity=25.6281407035176, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71994604, Length=180, Percent_Identity=25.5555555555556, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=211, Percent_Identity=33.175355450237, Blast_Score=84, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6322861, Length=185, Percent_Identity=32.4324324324324, Blast_Score=74, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6322067, Length=290, Percent_Identity=24.4827586206897, Blast_Score=66, Evalue=8e-12,
Organism=Drosophila melanogaster, GI21358495, Length=277, Percent_Identity=28.8808664259928, Blast_Score=111, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24580925, Length=215, Percent_Identity=29.7674418604651, Blast_Score=93, Evalue=3e-19,
Organism=Drosophila melanogaster, GI17737361, Length=244, Percent_Identity=30.7377049180328, Blast_Score=92, Evalue=6e-19,
Organism=Drosophila melanogaster, GI21357041, Length=210, Percent_Identity=31.9047619047619, Blast_Score=88, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24644339, Length=185, Percent_Identity=32.4324324324324, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI116007236, Length=197, Percent_Identity=28.9340101522843, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI116007238, Length=176, Percent_Identity=29.5454545454545, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28571387, Length=192, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24649181, Length=193, Percent_Identity=26.4248704663212, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24639444, Length=251, Percent_Identity=29.8804780876494, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI21357673, Length=184, Percent_Identity=28.804347826087, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI23397609, Length=233, Percent_Identity=27.8969957081545, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28571526, Length=195, Percent_Identity=28.2051282051282, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24648944, Length=202, Percent_Identity=27.2277227722772, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI21355631, Length=231, Percent_Identity=26.4069264069264, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24640492, Length=197, Percent_Identity=25.8883248730964, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24663911, Length=224, Percent_Identity=26.7857142857143, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI281364892, Length=250, Percent_Identity=26, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21356301, Length=217, Percent_Identity=24.4239631336406, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI221510726, Length=263, Percent_Identity=25.4752851711027, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24581726, Length=278, Percent_Identity=24.4604316546763, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 31908; Mature: 31777

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MSDRELKGMVVVITGASSGFGKGCSLRFAREGCTVVLAARRDQLLDRLAQECEAFGNPAL
CCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCCCC
PVPTDVSLAEDVAGLAERALGEFGRIDVWVNNAGAGAIGRFEDVPLEDHVKVIQTDLLGT
CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LYGSYFAMTEFRRQGQGTLINLASVIGKVPSPYFASYAAAKHGVVGLSASLRQELEQDQI
HHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCHHHHHHHHHHCCCEECCHHHHHHHHHHCC
DTIRVCTVMPTTFDTPFFEHAAQYSGKEASPIPPTYDPSEVVDTIVSLAKDPKDEVSVGT
CEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCH
AAKVATFAHQFFPGMVEAMMARQTRKAEFDEATTGEHTSGSLHEPMPTGTSIGGGWKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDRELKGMVVVITGASSGFGKGCSLRFAREGCTVVLAARRDQLLDRLAQECEAFGNPAL
CCCCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCCCC
PVPTDVSLAEDVAGLAERALGEFGRIDVWVNNAGAGAIGRFEDVPLEDHVKVIQTDLLGT
CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LYGSYFAMTEFRRQGQGTLINLASVIGKVPSPYFASYAAAKHGVVGLSASLRQELEQDQI
HHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCHHHHHHHHHHCCCEECCHHHHHHHHHHCC
DTIRVCTVMPTTFDTPFFEHAAQYSGKEASPIPPTYDPSEVVDTIVSLAKDPKDEVSVGT
CEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCH
AAKVATFAHQFFPGMVEAMMARQTRKAEFDEATTGEHTSGSLHEPMPTGTSIGGGWKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]