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The map label for this gene is 116622039

Identifier: 116622039

GI number: 116622039

Start: 3705455

End: 3706702

Strand: Direct

Name: 116622039

Synonym: Acid_2924

Alternate gene names: NA

Gene position: 3705455-3706702 (Clockwise)

Preceding gene: 116622038

Following gene: 116622040

Centisome position: 37.18

GC content: 59.38

Gene sequence:

>1248_bases
ATGAGCGAATTGATCGACAACCGGGCACAGCGGGTACGGACCCTGAAAGGTATTATCAAACGCCTTCACGCTGGAGATGC
GCCGGACGAGGTTCGGAACAGCCTCAAAGAGCTGGTCTGCCAAACCGACTACTCCGAAGTCATGGCCATGGAGCAGGAGT
TGATCGCAGACGGCATGCCCGTCGAGGAAATTCAGGGCATGTGCGACCTGCATTCGCAAGTTACTCGCGAAGTTCTGGTC
CAACTCGCGCCCGCGCCGGTTCCTCCCGGCCATCCAGTGGATACGTTTCGCCGGGAGAACAAAGCGCTACGTGAGTCTGC
CGCTCGTCTCCAGAAGGCCATGAACGGTGTTCTCGAAACTGCCGATGACGGGGATGCTTCCGCCCGGTTGCTTGAGTGGC
GCCAAGCACTCAACGAATTGCAGGACGTCGATAAGCACTACCAGCGGAAAGAGCACCTATTGTCTACCTGTCTGGAGCGC
CACGGTATCACCGGCCCTTCAAAGGTGATGTGGGGCAAAGACGACCAGATCCGCGAACTGCTAAAAGACACCAGCGTCGC
GCTCCGGCAGAGTGATACCTCGGTTGCGGAGTTGAAGGTTCTGGCTGCCACCACGGGCGCCGCGGCTGCCGGCGCAGTCC
ACGAAATGATCTATAAGGAAGAACAGATTCTGCTGCCCATCTGCCTGGAGCGGTTCACGGCTGACGAATGGGCGGAGATT
TGGGCGTCCTCACCGCGATACGGCTGGTGCCTGGTGGAACCCCGTCAAGGTTACAAGCCGTTCACCTCTGAGGCAGCGGG
CCGGGCTTCTGTGGACGGTGGGGTATCGCTTCCGACGGGGGCGCTTGCGCTTGAACAGCTCATCGCCATCTTCTCCACGC
TTCCGGTCGATCTCACGTTTGTGGATGCAAACGACCGGGTCGCATTTTTCTCAGAAGGCCCGAGCCGGGTATTCGCGCGA
AGCCGCACCATCGTTGGGCGGATGGTCCAAAACTGTCATCCGCCGCGTAGCGTCGACGTCGTAGAACGGATTCTCAGTGA
CTTCCGGGAGGGCCGGCAAAACGTCGCCGAATTCTGGCTTCAGTTCGTCGGCCGGTTTGTGCACATCCGTTATTTCGCAG
TGAGAAGTGAAGACGGGCGCTATCTAGGAACCCTCGAGGTGACACAGGATGTTGGGCCCATTCGGGCACTGGAAGGTGAG
CGACGGCTTTTGGAGTACGCCGAGCCATCCCCAGTAGGTGCTCGATGA

Upstream 100 bases:

>100_bases
CGGAGTAGCCGAACTCGTTACGGGCTTTGCCGCCGGACGGTAAGCGGGCTCGCGTTTTCCGTCGGGCCGTGACGCCTAAG
CTCAAATTGAGGAACAAACG

Downstream 100 bases:

>100_bases
GCCTTTCAATCGGTCCCGAAACCACAGTGGGAGCGCTCCTGAGTACCTTTCCCGCTCTTGAAGGAGTTCTGGTCGATATG
GCGCCGGCATTCGCGAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Sensory Box Protein; Pas/Pac Sensor Protein; PAS Domain S-Box; PAS Domain S-Box Protein

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MSELIDNRAQRVRTLKGIIKRLHAGDAPDEVRNSLKELVCQTDYSEVMAMEQELIADGMPVEEIQGMCDLHSQVTREVLV
QLAPAPVPPGHPVDTFRRENKALRESAARLQKAMNGVLETADDGDASARLLEWRQALNELQDVDKHYQRKEHLLSTCLER
HGITGPSKVMWGKDDQIRELLKDTSVALRQSDTSVAELKVLAATTGAAAAGAVHEMIYKEEQILLPICLERFTADEWAEI
WASSPRYGWCLVEPRQGYKPFTSEAAGRASVDGGVSLPTGALALEQLIAIFSTLPVDLTFVDANDRVAFFSEGPSRVFAR
SRTIVGRMVQNCHPPRSVDVVERILSDFREGRQNVAEFWLQFVGRFVHIRYFAVRSEDGRYLGTLEVTQDVGPIRALEGE
RRLLEYAEPSPVGAR

Sequences:

>Translated_415_residues
MSELIDNRAQRVRTLKGIIKRLHAGDAPDEVRNSLKELVCQTDYSEVMAMEQELIADGMPVEEIQGMCDLHSQVTREVLV
QLAPAPVPPGHPVDTFRRENKALRESAARLQKAMNGVLETADDGDASARLLEWRQALNELQDVDKHYQRKEHLLSTCLER
HGITGPSKVMWGKDDQIRELLKDTSVALRQSDTSVAELKVLAATTGAAAAGAVHEMIYKEEQILLPICLERFTADEWAEI
WASSPRYGWCLVEPRQGYKPFTSEAAGRASVDGGVSLPTGALALEQLIAIFSTLPVDLTFVDANDRVAFFSEGPSRVFAR
SRTIVGRMVQNCHPPRSVDVVERILSDFREGRQNVAEFWLQFVGRFVHIRYFAVRSEDGRYLGTLEVTQDVGPIRALEGE
RRLLEYAEPSPVGAR
>Mature_414_residues
SELIDNRAQRVRTLKGIIKRLHAGDAPDEVRNSLKELVCQTDYSEVMAMEQELIADGMPVEEIQGMCDLHSQVTREVLVQ
LAPAPVPPGHPVDTFRRENKALRESAARLQKAMNGVLETADDGDASARLLEWRQALNELQDVDKHYQRKEHLLSTCLERH
GITGPSKVMWGKDDQIRELLKDTSVALRQSDTSVAELKVLAATTGAAAAGAVHEMIYKEEQILLPICLERFTADEWAEIW
ASSPRYGWCLVEPRQGYKPFTSEAAGRASVDGGVSLPTGALALEQLIAIFSTLPVDLTFVDANDRVAFFSEGPSRVFARS
RTIVGRMVQNCHPPRSVDVVERILSDFREGRQNVAEFWLQFVGRFVHIRYFAVRSEDGRYLGTLEVTQDVGPIRALEGER
RLLEYAEPSPVGAR

Specific function: Unknown

COG id: COG2461

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46375; Mature: 46244

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELIDNRAQRVRTLKGIIKRLHAGDAPDEVRNSLKELVCQTDYSEVMAMEQELIADGMP
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
VEEIQGMCDLHSQVTREVLVQLAPAPVPPGHPVDTFRRENKALRESAARLQKAMNGVLET
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ADDGDASARLLEWRQALNELQDVDKHYQRKEHLLSTCLERHGITGPSKVMWGKDDQIREL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
LKDTSVALRQSDTSVAELKVLAATTGAAAAGAVHEMIYKEEQILLPICLERFTADEWAEI
HHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
WASSPRYGWCLVEPRQGYKPFTSEAAGRASVDGGVSLPTGALALEQLIAIFSTLPVDLTF
HCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEE
VDANDRVAFFSEGPSRVFARSRTIVGRMVQNCHPPRSVDVVERILSDFREGRQNVAEFWL
ECCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QFVGRFVHIRYFAVRSEDGRYLGTLEVTQDVGPIRALEGERRLLEYAEPSPVGAR
HHHHHHHHHHEEEEECCCCCEEEEEEEHHCCCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SELIDNRAQRVRTLKGIIKRLHAGDAPDEVRNSLKELVCQTDYSEVMAMEQELIADGMP
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
VEEIQGMCDLHSQVTREVLVQLAPAPVPPGHPVDTFRRENKALRESAARLQKAMNGVLET
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ADDGDASARLLEWRQALNELQDVDKHYQRKEHLLSTCLERHGITGPSKVMWGKDDQIREL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
LKDTSVALRQSDTSVAELKVLAATTGAAAAGAVHEMIYKEEQILLPICLERFTADEWAEI
HHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
WASSPRYGWCLVEPRQGYKPFTSEAAGRASVDGGVSLPTGALALEQLIAIFSTLPVDLTF
HCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEE
VDANDRVAFFSEGPSRVFARSRTIVGRMVQNCHPPRSVDVVERILSDFREGRQNVAEFWL
ECCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QFVGRFVHIRYFAVRSEDGRYLGTLEVTQDVGPIRALEGERRLLEYAEPSPVGAR
HHHHHHHHHHEEEEECCCCCEEEEEEEHHCCCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA