Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622011
Identifier: 116622011
GI number: 116622011
Start: 3674139
End: 3674705
Strand: Reverse
Name: 116622011
Synonym: Acid_2896
Alternate gene names: NA
Gene position: 3674705-3674139 (Counterclockwise)
Preceding gene: 116622012
Following gene: 116622008
Centisome position: 36.87
GC content: 60.49
Gene sequence:
>567_bases ATGCGACTAGACCCGACCGACGAGGCGGCCATCGAGGACAAACGCCGCGAGATAAAACTCGCCATGGGTGCACTGGGGCG AGAAATCCGGCGCGGCAACAACGACGAACTCGTGTACTGGATCATCCCCGGCGCCCTTGCGTGCGCACACCGACCCCTCC GCTATCACCCACAATACGGCGCCTCACGAAAGCCACTCCCACAAGACGCCACACCGCTTATCGAGGAGTGGGTCGAGCTT ATCAAAGTGGAGGGCATCAACAGCATCCTCTCCTTGTGGCACGAGGGCGACAGTGCCTGCTACCGCTCCCTCACACTTGG CGACGGAGACCTCCTGGCGTACTTCAAAGCGCAAGGGTTCACGATCGCCCATCACCCCTACGAAGACCCCGCCCACAAAC ACACCCCGCCAGGAGAAGCACGCAAAACCCTGGAGCGCATCAGAGAAGCAGCGCTTAAAAGCTACGACGAGCTCCCCAAA CCCGTCCTTATTCAGTGCAGCGCCGGAGAAGACCGCAGCGCACCTGTTGCCGCGTACATCCACGCCAAACGAACAATGAA GGACTGA
Upstream 100 bases:
>100_bases TCGATGTCTCGCAAAACGTGTACACGCAAGCCGCCATCAAACAACAAGCTCATGCCGTCAACCTGCTCGACCACGCGCTT CGCTACAATACCGCGCAGGC
Downstream 100 bases:
>100_bases GTGGAATTTTCAGGAATTCTGAGGACAAAAGCTTGAACTGCTGATTGCGCCTAACCGCAAGATGGAGAAGGGGTTGTTGG AGCGGGAGACGGGGTTCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MRLDPTDEAAIEDKRREIKLAMGALGREIRRGNNDELVYWIIPGALACAHRPLRYHPQYGASRKPLPQDATPLIEEWVEL IKVEGINSILSLWHEGDSACYRSLTLGDGDLLAYFKAQGFTIAHHPYEDPAHKHTPPGEARKTLERIREAALKSYDELPK PVLIQCSAGEDRSAPVAAYIHAKRTMKD
Sequences:
>Translated_188_residues MRLDPTDEAAIEDKRREIKLAMGALGREIRRGNNDELVYWIIPGALACAHRPLRYHPQYGASRKPLPQDATPLIEEWVEL IKVEGINSILSLWHEGDSACYRSLTLGDGDLLAYFKAQGFTIAHHPYEDPAHKHTPPGEARKTLERIREAALKSYDELPK PVLIQCSAGEDRSAPVAAYIHAKRTMKD >Mature_188_residues MRLDPTDEAAIEDKRREIKLAMGALGREIRRGNNDELVYWIIPGALACAHRPLRYHPQYGASRKPLPQDATPLIEEWVEL IKVEGINSILSLWHEGDSACYRSLTLGDGDLLAYFKAQGFTIAHHPYEDPAHKHTPPGEARKTLERIREAALKSYDELPK PVLIQCSAGEDRSAPVAAYIHAKRTMKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21160; Mature: 21160
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLDPTDEAAIEDKRREIKLAMGALGREIRRGNNDELVYWIIPGALACAHRPLRYHPQYG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHCCCCCCCCCCC ASRKPLPQDATPLIEEWVELIKVEGINSILSLWHEGDSACYRSLTLGDGDLLAYFKAQGF CCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHEEECCCCCEEEEEECCCE TIAHHPYEDPAHKHTPPGEARKTLERIREAALKSYDELPKPVLIQCSAGEDRSAPVAAYI EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHE HAKRTMKD EHHHHCCC >Mature Secondary Structure MRLDPTDEAAIEDKRREIKLAMGALGREIRRGNNDELVYWIIPGALACAHRPLRYHPQYG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHCCCCCCCCCCC ASRKPLPQDATPLIEEWVELIKVEGINSILSLWHEGDSACYRSLTLGDGDLLAYFKAQGF CCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHEEECCCCCEEEEEECCCE TIAHHPYEDPAHKHTPPGEARKTLERIREAALKSYDELPKPVLIQCSAGEDRSAPVAAYI EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHE HAKRTMKD EHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA