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The map label for this gene is ydeM [C]

Identifier: 116621966

GI number: 116621966

Start: 3610984

End: 3612153

Strand: Reverse

Name: ydeM [C]

Synonym: Acid_2851

Alternate gene names: 116621966

Gene position: 3612153-3610984 (Counterclockwise)

Preceding gene: 116621967

Following gene: 116621964

Centisome position: 36.25

GC content: 55.13

Gene sequence:

>1170_bases
ATGATCGAAGTGCGGCCTTTTGGCGTGAAATGCAATATTCGATGCCGTTATTGCTATCAGGAACCGCAGCGTACGTTCGA
CAGTAATCGCCTATACGATATTGAAGCGATGAAGGGCTCCATAGTCGCGGAGGGCGGCCCGTTTGCCTTATTCGGCGGCG
AGCCGCTGCTGGTTCCGCACGCGGATATGGAACAGCTTTTCGCCTGGGGCTATGAACGATTCGGGGAGAATGGGATTCAA
ACGAATGGGTCGCTCATCGATGATGAGCATATTCGACTTTTTCGCACTTACAATGTGCGCGTTGGGATTTCGCTTGATGG
CCCCGGTGAACTGAACGACATTCGCTGGGCGGGCACGCTGGAGCGGACGAGAGCTGCAACGTCGAAAAGCCAACAAGCAG
TTGAGAGGCTGTGTCAGGAAGGGATCATCCCCAGCATTATTGTGACGCTACACAAGCAAAACGCCACGCCGGAGCGCTTA
CCGACTCTGATTGCCTGGATGCGCGATCTTGCCTTGCGGGGCGTAACTTCAGTCCGGCTGCACCTTCTCGAGATTGATGG
TCCGGAGGTTCGCGAGCATTTCGCCTTGACTACGGGCGAGAATGTCAATGCTTTGATGGCGTTCGGCCAGCTCCAGGCTG
AGATTCCGAAGTTGGACTTGGACGTATTCAGCGATATGCGGCGCTTGTTACTGGGCAAAGATGGCGCCGGGCATGCGACG
ACCTGCGTCTGGAATGCCTGCGATCCATATACCACCGCCGCGGTTCGGGGCGTCGAAGGCAACGGTCAACGCAGCAATTG
CGGAAGGACATACAAAGACGGAGTCGAGTTTGTTAAGGCGGCGACTCCTGGTTATGAGCGCTATATTTCTCTTTTTCACA
CGCCGCAAGAGTTCGGTGGATGTAATGGCTGCCGGTTTTTCATCATGTGCAAGGGGCAATGCCCAGGCACCGCAATCGCT
TCAGATTGGCGAAATCGCACAGAGCATTGCGATGTCTGGAAAATGCTTTTTACATGGATGGAAGCGGAGCTTCTGGCCGA
AGGGAATGTGCCGATATCCTTGGTGCCCGCGCGAAAGGATGTCGAGACGATTCTTTTGGAGTATTGGTCGAGGGGGGCAA
ACACCACGATCGAAGGCGCACTTTCGGAGCGCAACCTAGAGCGCGCATGA

Upstream 100 bases:

>100_bases
CCTGGAACTCCGGGAAGGACTTAATGAATGGGTGCGCCTGATACACGGGCGGATCGCCGACCTCGAGAAGCGCCTGGAAT
CCCTGGAGAAGAAATAAACG

Downstream 100 bases:

>100_bases
CGCACTTGAACTTTTCAGTTCCTTACTTCTTTCGGTCCATGTGGACCAGTGACCTTGCCAGGAATCAATGGGAGCCTCGC
ATCCGTGCCATCGCCGCCGC

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Arylsulfatase-Activating Protein AslB; Arylsulfatase Regulatory Protein

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MIEVRPFGVKCNIRCRYCYQEPQRTFDSNRLYDIEAMKGSIVAEGGPFALFGGEPLLVPHADMEQLFAWGYERFGENGIQ
TNGSLIDDEHIRLFRTYNVRVGISLDGPGELNDIRWAGTLERTRAATSKSQQAVERLCQEGIIPSIIVTLHKQNATPERL
PTLIAWMRDLALRGVTSVRLHLLEIDGPEVREHFALTTGENVNALMAFGQLQAEIPKLDLDVFSDMRRLLLGKDGAGHAT
TCVWNACDPYTTAAVRGVEGNGQRSNCGRTYKDGVEFVKAATPGYERYISLFHTPQEFGGCNGCRFFIMCKGQCPGTAIA
SDWRNRTEHCDVWKMLFTWMEAELLAEGNVPISLVPARKDVETILLEYWSRGANTTIEGALSERNLERA

Sequences:

>Translated_389_residues
MIEVRPFGVKCNIRCRYCYQEPQRTFDSNRLYDIEAMKGSIVAEGGPFALFGGEPLLVPHADMEQLFAWGYERFGENGIQ
TNGSLIDDEHIRLFRTYNVRVGISLDGPGELNDIRWAGTLERTRAATSKSQQAVERLCQEGIIPSIIVTLHKQNATPERL
PTLIAWMRDLALRGVTSVRLHLLEIDGPEVREHFALTTGENVNALMAFGQLQAEIPKLDLDVFSDMRRLLLGKDGAGHAT
TCVWNACDPYTTAAVRGVEGNGQRSNCGRTYKDGVEFVKAATPGYERYISLFHTPQEFGGCNGCRFFIMCKGQCPGTAIA
SDWRNRTEHCDVWKMLFTWMEAELLAEGNVPISLVPARKDVETILLEYWSRGANTTIEGALSERNLERA
>Mature_389_residues
MIEVRPFGVKCNIRCRYCYQEPQRTFDSNRLYDIEAMKGSIVAEGGPFALFGGEPLLVPHADMEQLFAWGYERFGENGIQ
TNGSLIDDEHIRLFRTYNVRVGISLDGPGELNDIRWAGTLERTRAATSKSQQAVERLCQEGIIPSIIVTLHKQNATPERL
PTLIAWMRDLALRGVTSVRLHLLEIDGPEVREHFALTTGENVNALMAFGQLQAEIPKLDLDVFSDMRRLLLGKDGAGHAT
TCVWNACDPYTTAAVRGVEGNGQRSNCGRTYKDGVEFVKAATPGYERYISLFHTPQEFGGCNGCRFFIMCKGQCPGTAIA
SDWRNRTEHCDVWKMLFTWMEAELLAEGNVPISLVPARKDVETILLEYWSRGANTTIEGALSERNLERA

Specific function: Unknown

COG id: COG0641

COG function: function code R; Arylsulfatase regulator (Fe-S oxidoreductase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43557; Mature: 43557

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEVRPFGVKCNIRCRYCYQEPQRTFDSNRLYDIEAMKGSIVAEGGPFALFGGEPLLVPH
CCEEEECCEEEEEEEEEECCCHHHHCCCCCEEEEEECCCCEEECCCCEEEECCCEEEECC
ADMEQLFAWGYERFGENGIQTNGSLIDDEHIRLFRTYNVRVGISLDGPGELNDIRWAGTL
CCHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEEEEEEEEEEEEECCCCCCCCEEECCCH
ERTRAATSKSQQAVERLCQEGIIPSIIVTLHKQNATPERLPTLIAWMRDLALRGVTSVRL
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEE
HLLEIDGPEVREHFALTTGENVNALMAFGQLQAEIPKLDLDVFSDMRRLLLGKDGAGHAT
EEEECCCHHHHHHEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCE
TCVWNACDPYTTAAVRGVEGNGQRSNCGRTYKDGVEFVKAATPGYERYISLFHTPQEFGG
EEEECCCCCCHHHHEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHCC
CNGCRFFIMCKGQCPGTAIASDWRNRTEHCDVWKMLFTWMEAELLAEGNVPISLVPARKD
CCCEEEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHH
VETILLEYWSRGANTTIEGALSERNLERA
HHHHHHHHHHCCCCCEEEHHHHCCCCCCC
>Mature Secondary Structure
MIEVRPFGVKCNIRCRYCYQEPQRTFDSNRLYDIEAMKGSIVAEGGPFALFGGEPLLVPH
CCEEEECCEEEEEEEEEECCCHHHHCCCCCEEEEEECCCCEEECCCCEEEECCCEEEECC
ADMEQLFAWGYERFGENGIQTNGSLIDDEHIRLFRTYNVRVGISLDGPGELNDIRWAGTL
CCHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEEEEEEEEEEEEECCCCCCCCEEECCCH
ERTRAATSKSQQAVERLCQEGIIPSIIVTLHKQNATPERLPTLIAWMRDLALRGVTSVRL
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEE
HLLEIDGPEVREHFALTTGENVNALMAFGQLQAEIPKLDLDVFSDMRRLLLGKDGAGHAT
EEEECCCHHHHHHEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCE
TCVWNACDPYTTAAVRGVEGNGQRSNCGRTYKDGVEFVKAATPGYERYISLFHTPQEFGG
EEEECCCCCCHHHHEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHCC
CNGCRFFIMCKGQCPGTAIASDWRNRTEHCDVWKMLFTWMEAELLAEGNVPISLVPARKD
CCCEEEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHH
VETILLEYWSRGANTTIEGALSERNLERA
HHHHHHHHHHCCCCCEEEHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA