Click here to switch to the map view.

The map label for this gene is ywzG [H]

Identifier: 116621506

GI number: 116621506

Start: 3041144

End: 3041539

Strand: Direct

Name: ywzG [H]

Synonym: Acid_2388

Alternate gene names: 116621506

Gene position: 3041144-3041539 (Clockwise)

Preceding gene: 116621504

Following gene: 116621507

Centisome position: 30.52

GC content: 60.86

Gene sequence:

>396_bases
TTGCCGCCGGTACCGCCGCACAAAGATGTAGACAATCTACAGCCTTGCGTGTACAGTCTTTCCATGGGCGATCGCATCGA
ACTCCTTCAGGGCACGCTCGGGATGCTCGTTTTGCGGGCGCTGCAATGGGGTCCCCAGCACGGGTATGCCATTAGCCAGT
CCATCCGCACCCAGTCTTCCGAAGTCCTTCAAGTCGAAACCGGATCGCTCTACCCCGCGCTGCACCGCATGGAGAAGCAG
GGCTGGGTCCGCGCCGAATGGAAGCAGACCGACTCCAACCAGCGCGCCAAATTCTACAGCCTTACCGCTGCGGGCAAGAA
GCAACTGCACGAGGAGCATGCCCGCTGGAAGCGCATGGTGGCCGCGATCGGCCAGATTATGGAGCCCGCTCAATGA

Upstream 100 bases:

>100_bases
CAGGAATCCGAGAAAGGTCGCGCCCACCAAAGCCCAGAATTGTCCGCTGAATTTCCCCGCCGAAAACCCCATGTATATTC
AATTGTAAGTTAGGACAGGA

Downstream 100 bases:

>100_bases
ACCGCCGTGAGCGCGAGGTGGAGGAAGAACTCCAGAGCCACATCCGCATGGCGATCGCAGACCGCGTGCGCGCCGGCGAA
GATCCGGTCCGCGCGCGCGC

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MPPVPPHKDVDNLQPCVYSLSMGDRIELLQGTLGMLVLRALQWGPQHGYAISQSIRTQSSEVLQVETGSLYPALHRMEKQ
GWVRAEWKQTDSNQRAKFYSLTAAGKKQLHEEHARWKRMVAAIGQIMEPAQ

Sequences:

>Translated_131_residues
MPPVPPHKDVDNLQPCVYSLSMGDRIELLQGTLGMLVLRALQWGPQHGYAISQSIRTQSSEVLQVETGSLYPALHRMEKQ
GWVRAEWKQTDSNQRAKFYSLTAAGKKQLHEEHARWKRMVAAIGQIMEPAQ
>Mature_130_residues
PPVPPHKDVDNLQPCVYSLSMGDRIELLQGTLGMLVLRALQWGPQHGYAISQSIRTQSSEVLQVETGSLYPALHRMEKQG
WVRAEWKQTDSNQRAKFYSLTAAGKKQLHEEHARWKRMVAAIGQIMEPAQ

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 14864; Mature: 14733

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPVPPHKDVDNLQPCVYSLSMGDRIELLQGTLGMLVLRALQWGPQHGYAISQSIRTQSS
CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
EVLQVETGSLYPALHRMEKQGWVRAEWKQTDSNQRAKFYSLTAAGKKQLHEEHARWKRMV
CEEEEECCCCCHHHHHHHHCCCEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AAIGQIMEPAQ
HHHHHHCCCCC
>Mature Secondary Structure 
PPVPPHKDVDNLQPCVYSLSMGDRIELLQGTLGMLVLRALQWGPQHGYAISQSIRTQSS
CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
EVLQVETGSLYPALHRMEKQGWVRAEWKQTDSNQRAKFYSLTAAGKKQLHEEHARWKRMV
CEEEEECCCCCHHHHHHHHCCCEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AAIGQIMEPAQ
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]