Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116619672
Identifier: 116619672
GI number: 116619672
Start: 645503
End: 647938
Strand: Direct
Name: 116619672
Synonym: Acid_0535
Alternate gene names: NA
Gene position: 645503-647938 (Clockwise)
Preceding gene: 116619671
Following gene: 116619673
Centisome position: 6.48
GC content: 63.05
Gene sequence:
>2436_bases GTGACGCGCCGTAACTTCCTGGCGGCGCCTGTTGCCGCTGCACTTGCGCAATCCACGGATGACGACCTGCGCACGCTGAT TTCCGATGCGGATCTGGTGTACACGAAGCCGGTGCCGCGCAGCGAAGAGGGCATGCCGGTCGGCAACGGCCGCATGGGCA GCCTGGTCTGGACTACGCCCGAATCGCTGCGTTTCCAAATCAATCGCGTCGATGTCTACGCGAATAACAGTTCCACCAAC AGCTTCTTCGAACGCCACAACGATTACTGCGGCGGCTGCGGCTTCGTCGATATCGATTTCGGCAAAGAAGTCTTCCCCGA ATCGGGCTTTGCGCAGCGCCTCAATGTCTACGATGGGGTCCTGACCGTCGCCGGCGCCGAGATGATCGCGTGCCCCGCGC AGGACGTAATCGCCATCCAGGTGCCTGCGCCCGTGAAGGTCAACCTGCGCATGCTGCGCGCGGAGAGTAAGTACTACGGC GGAAAGCTGGAAGAGATGGTTCGCGACCACGTGGTCACGGTGCAGACGCGCAATCACACCGCGGCATCTCGGCTGGAAGT GCGCGGCGATTGCATCGTGCTCACCCAGGAGTTTCGCGAGGGCGATTATTGCTGTAAATCCGCGGTCGCGATCGGCAAGG GCAAGGGAAGAATTCTCAATGAGACCGAGCTCCGGCTCGAAGCGCAGCCCGGTACGGTGTTGATCGCGAGCGCCGCCACT TTCGACCCCAAGGAGGACATCGCGGCCATTGCGCTGCGCCAGCTCGAGGCCGCTTCGTCCAAAGGCTATCCGGCCCTGCG CCAGGAGACCATGGCCTGGTGGCACGACTTCTGGTCGCGCGGATATGTGGCGCTGAGCAGCGCCGATGGCGTGGCTCGAA ACGTCGCGCGGAACTATCACTACTTCCTGTACCTGATGGCCGCCGCTTCGCGAGGTAAGTTCCCGCCGAAATTCAATGGC ATGCTCTGGAATACCGGCGGCGACCTGCGCACCTGGGGCGCGCAGCACTGGTATGCCAACACGAGCTGCTATTACGAAGC TCTCTTCGCAGCCAATCGCTTGGAACTGCTCGACCCGCTGTTCGCGATGTACAGCGGCATGTTCGATGCCAGCGCCGTCG CGGCACGCCAGCAGTGGGGCAGCCAGGGCATCTACATCGGCGAGACCTCCTACTTCAATGGATTGGAGAAAATGCCCGAC GAGATCGCCGAGGAAATGCAGAGCCTTTACCTCTTGCGCAAACCATGGGAGCAGCGCTCCGGGCGTTTCAAGGAATACGC CGCCAACAAGCATCCGCACTCCAGCCGCTGGAACTGGATTCAGGCGGGCGAGTGGAAGGACGGCCGCTACGTAATCACGG AGCGCGGCTTCGGGCCGTACGGCGCGGTCAATCACATCTTCGGCAGCACCGCCAAGATCGCCTACTATTACTGGCGCCGC TTCGAGTTCACGCAGGATGTCGATTGGCTCCGCACCCGCGCCTACCCGATGATCAGGGGCGCCGCCGAGTTCTATCGCAA CTATCCGAACGTGAGCAAGGGCGCGGACGGAAAATATCACATTCACCACGTCAACAGCAATGAAAGCGTCTATGGCGCGC GCGATACCGATGAGGATCTTTCCGCGATGCACGGCATCACGGCGGCGGCACTGCGGGCCGCCCAAATCCTTCAAGTGGAC GTCGAACTGCAATCGAAATGGCGCGAGTTTCTGGACGACCTCGCGCCTCTCTCCACCAGCGACAACCCCGAAGCGTTAAA GCCCGACAACTACACCGGACCACGCGTCTTTGTGCGCGGCCTGAAGCCGGCGGTGAAACCCGGCGGCTTCACGCCCGATG GCAACAGCTTGCCGATGTTCCTGTTCGACCTCTGCAACAGCGGTCCCAATCGCGAGATCGCGCACGCCACGTTCAACGCC TCACTACGCAATGGCGTGGGGCCGCGGACCACCGTCCCGGTGCTCTCCAAGATGGCGATCGCGGCCGCGCAATTGGGCAG CGCCGATGCCGTGCGCTACATGATTCCCGCGCAGATCGAAGCGCGGGTTCCGGAACGCGCCACTGCCTATAAAGGCGGCG CCGTGCTCGCCAACCGCATGACTTTACGCGAAGGTCCGCAGGCGCTCGATGCGCAGCGCCTGGGCCGAGCCGCCGAAGCG CTGCAGACCGCGCTTGTGAACAGCGCTCCGCCCGCGCCGGGAGAGGACAGCACGATCGAACTCTTTACCGCCTGGCCCAA GGAGTGGGACGCTCGCTTTAAACTCGGCGCCCGCGGCGGCTTTGTAGTCACCGCGTCGATCCGCGCCGGCCGGGTGGAGA CGGTCGAACTGGAATCGCTCGCGGGCGCCGAATGCCGCGTGCGCAATCCGTGGACCGGCGAGTTGCAGCGTTACCCGACG CGCAAGGGGCAGAAGATCACTTTGAGGAAAGCATGA
Upstream 100 bases:
>100_bases GCACGCTGCTGTGGAACGGGCTGACGCTCGAAAATCTTACCGAGCCGGGCTGCTGGGTGCTCTCCATGCAGAAGGAGATT CTCCACGCGGAGAAGTGCAA
Downstream 100 bases:
>100_bases AGCAACGATGCGGCTGGGCCAGCGGCGATCGATACATCGCCTATCATGACGAAGAATGGGGTGTGCCAGTCCACGACGAT CGCGTGCTTTTCGAGTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 811; Mature: 810
Protein sequence:
>811_residues MTRRNFLAAPVAAALAQSTDDDLRTLISDADLVYTKPVPRSEEGMPVGNGRMGSLVWTTPESLRFQINRVDVYANNSSTN SFFERHNDYCGGCGFVDIDFGKEVFPESGFAQRLNVYDGVLTVAGAEMIACPAQDVIAIQVPAPVKVNLRMLRAESKYYG GKLEEMVRDHVVTVQTRNHTAASRLEVRGDCIVLTQEFREGDYCCKSAVAIGKGKGRILNETELRLEAQPGTVLIASAAT FDPKEDIAAIALRQLEAASSKGYPALRQETMAWWHDFWSRGYVALSSADGVARNVARNYHYFLYLMAAASRGKFPPKFNG MLWNTGGDLRTWGAQHWYANTSCYYEALFAANRLELLDPLFAMYSGMFDASAVAARQQWGSQGIYIGETSYFNGLEKMPD EIAEEMQSLYLLRKPWEQRSGRFKEYAANKHPHSSRWNWIQAGEWKDGRYVITERGFGPYGAVNHIFGSTAKIAYYYWRR FEFTQDVDWLRTRAYPMIRGAAEFYRNYPNVSKGADGKYHIHHVNSNESVYGARDTDEDLSAMHGITAAALRAAQILQVD VELQSKWREFLDDLAPLSTSDNPEALKPDNYTGPRVFVRGLKPAVKPGGFTPDGNSLPMFLFDLCNSGPNREIAHATFNA SLRNGVGPRTTVPVLSKMAIAAAQLGSADAVRYMIPAQIEARVPERATAYKGGAVLANRMTLREGPQALDAQRLGRAAEA LQTALVNSAPPAPGEDSTIELFTAWPKEWDARFKLGARGGFVVTASIRAGRVETVELESLAGAECRVRNPWTGELQRYPT RKGQKITLRKA
Sequences:
>Translated_811_residues MTRRNFLAAPVAAALAQSTDDDLRTLISDADLVYTKPVPRSEEGMPVGNGRMGSLVWTTPESLRFQINRVDVYANNSSTN SFFERHNDYCGGCGFVDIDFGKEVFPESGFAQRLNVYDGVLTVAGAEMIACPAQDVIAIQVPAPVKVNLRMLRAESKYYG GKLEEMVRDHVVTVQTRNHTAASRLEVRGDCIVLTQEFREGDYCCKSAVAIGKGKGRILNETELRLEAQPGTVLIASAAT FDPKEDIAAIALRQLEAASSKGYPALRQETMAWWHDFWSRGYVALSSADGVARNVARNYHYFLYLMAAASRGKFPPKFNG MLWNTGGDLRTWGAQHWYANTSCYYEALFAANRLELLDPLFAMYSGMFDASAVAARQQWGSQGIYIGETSYFNGLEKMPD EIAEEMQSLYLLRKPWEQRSGRFKEYAANKHPHSSRWNWIQAGEWKDGRYVITERGFGPYGAVNHIFGSTAKIAYYYWRR FEFTQDVDWLRTRAYPMIRGAAEFYRNYPNVSKGADGKYHIHHVNSNESVYGARDTDEDLSAMHGITAAALRAAQILQVD VELQSKWREFLDDLAPLSTSDNPEALKPDNYTGPRVFVRGLKPAVKPGGFTPDGNSLPMFLFDLCNSGPNREIAHATFNA SLRNGVGPRTTVPVLSKMAIAAAQLGSADAVRYMIPAQIEARVPERATAYKGGAVLANRMTLREGPQALDAQRLGRAAEA LQTALVNSAPPAPGEDSTIELFTAWPKEWDARFKLGARGGFVVTASIRAGRVETVELESLAGAECRVRNPWTGELQRYPT RKGQKITLRKA >Mature_810_residues TRRNFLAAPVAAALAQSTDDDLRTLISDADLVYTKPVPRSEEGMPVGNGRMGSLVWTTPESLRFQINRVDVYANNSSTNS FFERHNDYCGGCGFVDIDFGKEVFPESGFAQRLNVYDGVLTVAGAEMIACPAQDVIAIQVPAPVKVNLRMLRAESKYYGG KLEEMVRDHVVTVQTRNHTAASRLEVRGDCIVLTQEFREGDYCCKSAVAIGKGKGRILNETELRLEAQPGTVLIASAATF DPKEDIAAIALRQLEAASSKGYPALRQETMAWWHDFWSRGYVALSSADGVARNVARNYHYFLYLMAAASRGKFPPKFNGM LWNTGGDLRTWGAQHWYANTSCYYEALFAANRLELLDPLFAMYSGMFDASAVAARQQWGSQGIYIGETSYFNGLEKMPDE IAEEMQSLYLLRKPWEQRSGRFKEYAANKHPHSSRWNWIQAGEWKDGRYVITERGFGPYGAVNHIFGSTAKIAYYYWRRF EFTQDVDWLRTRAYPMIRGAAEFYRNYPNVSKGADGKYHIHHVNSNESVYGARDTDEDLSAMHGITAAALRAAQILQVDV ELQSKWREFLDDLAPLSTSDNPEALKPDNYTGPRVFVRGLKPAVKPGGFTPDGNSLPMFLFDLCNSGPNREIAHATFNAS LRNGVGPRTTVPVLSKMAIAAAQLGSADAVRYMIPAQIEARVPERATAYKGGAVLANRMTLREGPQALDAQRLGRAAEAL QTALVNSAPPAPGEDSTIELFTAWPKEWDARFKLGARGGFVVTASIRAGRVETVELESLAGAECRVRNPWTGELQRYPTR KGQKITLRKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90113; Mature: 89981
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRNFLAAPVAAALAQSTDDDLRTLISDADLVYTKPVPRSEEGMPVGNGRMGSLVWTTP CCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECC ESLRFQINRVDVYANNSSTNSFFERHNDYCGGCGFVDIDFGKEVFPESGFAQRLNVYDGV HHHEEEEEEEEEEECCCCCHHHHHHCCCCCCCCCEEEECCCHHHCCCCCHHHHHHHHHHH LTVAGAEMIACPAQDVIAIQVPAPVKVNLRMLRAESKYYGGKLEEMVRDHVVTVQTRNHT HHHCCCCEEECCCCCEEEEECCCCCEEEEEEEEECCHHCCCHHHHHHHCCEEEEEECCCC AASRLEVRGDCIVLTQEFREGDYCCKSAVAIGKGKGRILNETELRLEAQPGTVLIASAAT CHHHEEECCCEEEEEHHHCCCHHHHHHHHHCCCCCCCEECCCEEEEECCCCEEEEEECCC FDPKEDIAAIALRQLEAASSKGYPALRQETMAWWHDFWSRGYVALSSADGVARNVARNYH CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHH YFLYLMAAASRGKFPPKFNGMLWNTGGDLRTWGAQHWYANTSCYYEALFAANRLELLDPL EEHEEEEHHHCCCCCCCCCCEEEECCCCCEECCCCCEECCCHHHHHHHHHHHHHHHHHHH FAMYSGMFDASAVAARQQWGSQGIYIGETSYFNGLEKMPDEIAEEMQSLYLLRKPWEQRS HHHHHCCCCHHHHHHHHHHCCCCEEECCHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHC GRFKEYAANKHPHSSRWNWIQAGEWKDGRYVITERGFGPYGAVNHIFGSTAKIAYYYWRR CCHHHHHCCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCHHHHHCCCCHHEEEEEHHH FEFTQDVDWLRTRAYPMIRGAAEFYRNYPNVSKGADGKYHIHHVNSNESVYGARDTDEDL CCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEECCCCCCHHH SAMHGITAAALRAAQILQVDVELQSKWREFLDDLAPLSTSDNPEALKPDNYTGPRVFVRG HHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHEEC LKPAVKPGGFTPDGNSLPMFLFDLCNSGPNREIAHATFNASLRNGVGPRTTVPVLSKMAI CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCHHHCCCCCCCHHHHHHHHHH AAAQLGSADAVRYMIPAQIEARVPERATAYKGGAVLANRMTLREGPQALDAQRLGRAAEA HHHHCCCCCCEEEECCCHHCCCCCCHHHHCCCCEEEEECCHHHCCCCHHHHHHHHHHHHH LQTALVNSAPPAPGEDSTIELFTAWPKEWDARFKLGARGGFVVTASIRAGRVETVELESL HHHHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCEEEEEECCCCCEEEEEHHCC AGAECRVRNPWTGELQRYPTRKGQKITLRKA CCCCEEECCCCCCHHHHCCCCCCCEEEEECC >Mature Secondary Structure TRRNFLAAPVAAALAQSTDDDLRTLISDADLVYTKPVPRSEEGMPVGNGRMGSLVWTTP CCCCHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECC ESLRFQINRVDVYANNSSTNSFFERHNDYCGGCGFVDIDFGKEVFPESGFAQRLNVYDGV HHHEEEEEEEEEEECCCCCHHHHHHCCCCCCCCCEEEECCCHHHCCCCCHHHHHHHHHHH LTVAGAEMIACPAQDVIAIQVPAPVKVNLRMLRAESKYYGGKLEEMVRDHVVTVQTRNHT HHHCCCCEEECCCCCEEEEECCCCCEEEEEEEEECCHHCCCHHHHHHHCCEEEEEECCCC AASRLEVRGDCIVLTQEFREGDYCCKSAVAIGKGKGRILNETELRLEAQPGTVLIASAAT CHHHEEECCCEEEEEHHHCCCHHHHHHHHHCCCCCCCEECCCEEEEECCCCEEEEEECCC FDPKEDIAAIALRQLEAASSKGYPALRQETMAWWHDFWSRGYVALSSADGVARNVARNYH CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHH YFLYLMAAASRGKFPPKFNGMLWNTGGDLRTWGAQHWYANTSCYYEALFAANRLELLDPL EEHEEEEHHHCCCCCCCCCCEEEECCCCCEECCCCCEECCCHHHHHHHHHHHHHHHHHHH FAMYSGMFDASAVAARQQWGSQGIYIGETSYFNGLEKMPDEIAEEMQSLYLLRKPWEQRS HHHHHCCCCHHHHHHHHHHCCCCEEECCHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHC GRFKEYAANKHPHSSRWNWIQAGEWKDGRYVITERGFGPYGAVNHIFGSTAKIAYYYWRR CCHHHHHCCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCHHHHHCCCCHHEEEEEHHH FEFTQDVDWLRTRAYPMIRGAAEFYRNYPNVSKGADGKYHIHHVNSNESVYGARDTDEDL CCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEECCCCCCHHH SAMHGITAAALRAAQILQVDVELQSKWREFLDDLAPLSTSDNPEALKPDNYTGPRVFVRG HHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHEEC LKPAVKPGGFTPDGNSLPMFLFDLCNSGPNREIAHATFNASLRNGVGPRTTVPVLSKMAI CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCHHHCCCCCCCHHHHHHHHHH AAAQLGSADAVRYMIPAQIEARVPERATAYKGGAVLANRMTLREGPQALDAQRLGRAAEA HHHHCCCCCCEEEECCCHHCCCCCCHHHHCCCCEEEEECCHHHCCCCHHHHHHHHHHHHH LQTALVNSAPPAPGEDSTIELFTAWPKEWDARFKLGARGGFVVTASIRAGRVETVELESL HHHHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCEEEEEECCCCCEEEEEHHCC AGAECRVRNPWTGELQRYPTRKGQKITLRKA CCCCEEECCCCCCHHHHCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA