| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is catE [H]
Identifier: 116517115
GI number: 116517115
Start: 73076
End: 73930
Strand: Direct
Name: catE [H]
Synonym: SPD_0072
Alternate gene names: 116517115
Gene position: 73076-73930 (Clockwise)
Preceding gene: 116517175
Following gene: 116515835
Centisome position: 3.57
GC content: 44.33
Gene sequence:
>855_bases ATGACCTATGAATATAAGAGTCACATTTATTTGGCAGAGACAGCTTTAAATGTAAAGGATTTGGCCAGTCAAACAGCCTT TTATCAGCAAGTTATTGGTTTAGAAATCTTATCTCAAACTGAGACAGAGTCCATTCTAGGCCTTGGTGGAAAAGTCTTGG TACAGCTGATTCAAGCACAAGAGAGCGGAGAAGTGAGGGAACATTATGGTCTTTACCATTTGGCCATTCTCTTGCCCACA CGCAAGGCTTTGGCTGATGTCTTGAAACACCTGACAGATTTGCAAATTCCTCTTGTCGGCGGTGCAGACCATGGTTACAG TGAAGCTATTTACTTGGAAGATTTGGAGGGAAATGGCATTGAACTCTATCGAGATAAGCCAGTTTCCACATGGGATATTC GAGAAGATGGACGCATTATCGGAGTGACGGAGGCTCTTGCGGCGCAGGACATTTATGAGTTGGGGGAAAGAGTAGAGCCC TTTATCCTGGCAGAAGGTACAAGAATGGGGCATATTCATCTTTCCGTCAAGGATAGTCGAAAGTCCAGCCAGTTTTATCA AAAGGTGTTAGGGCTAGAGGATAAATTCAGTGTGCCTAGCGCTAGTTGGATTGCGGCTGGAGATTACCATCATCATTTAG CAGTTAACGAATGGAGAGGAAAAGGTCTGGCTTCGCGTAAGCAAGGCTTACCAGGTTTAGCCTACTATGTCATCGAAGTC GCACATAAAAAAGAACTGTTAACGATTGCCCAACGAGCACAAGAAGTTGACGCACCAATCAAATGGATGACATCGAGCAA ATTGGAAATCACAGACTCAGATGGCATCGTGACCCGTATTCGTTTAGCAAGGTAA
Upstream 100 bases:
>100_bases TGAAATGGTGTTATTTTTGAGTTATCTGGCTTGACTTTCTTGATGGAAATTATATAATAGTTGTAATAATAATAATTACA ACGAGAAAAGAGGACCATTT
Downstream 100 bases:
>100_bases AATTAGGAATTTTTAATAAGTTATAAGTATTGCTAGTTTGCTTTTTGAACGGTCTTTGGTAACAGAACTGCGTGAGCTGG ATGGGTGAGAATTTTGACAA
Product: hypothetical protein
Products: NA
Alternate protein names: Catechol-induced ring cleavage extradiol dioxygenase [H]
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTYEYKSHIYLAETALNVKDLASQTAFYQQVIGLEILSQTETESILGLGGKVLVQLIQAQESGEVREHYGLYHLAILLPT RKALADVLKHLTDLQIPLVGGADHGYSEAIYLEDLEGNGIELYRDKPVSTWDIREDGRIIGVTEALAAQDIYELGERVEP FILAEGTRMGHIHLSVKDSRKSSQFYQKVLGLEDKFSVPSASWIAAGDYHHHLAVNEWRGKGLASRKQGLPGLAYYVIEV AHKKELLTIAQRAQEVDAPIKWMTSSKLEITDSDGIVTRIRLAR
Sequences:
>Translated_284_residues MTYEYKSHIYLAETALNVKDLASQTAFYQQVIGLEILSQTETESILGLGGKVLVQLIQAQESGEVREHYGLYHLAILLPT RKALADVLKHLTDLQIPLVGGADHGYSEAIYLEDLEGNGIELYRDKPVSTWDIREDGRIIGVTEALAAQDIYELGERVEP FILAEGTRMGHIHLSVKDSRKSSQFYQKVLGLEDKFSVPSASWIAAGDYHHHLAVNEWRGKGLASRKQGLPGLAYYVIEV AHKKELLTIAQRAQEVDAPIKWMTSSKLEITDSDGIVTRIRLAR >Mature_283_residues TYEYKSHIYLAETALNVKDLASQTAFYQQVIGLEILSQTETESILGLGGKVLVQLIQAQESGEVREHYGLYHLAILLPTR KALADVLKHLTDLQIPLVGGADHGYSEAIYLEDLEGNGIELYRDKPVSTWDIREDGRIIGVTEALAAQDIYELGERVEPF ILAEGTRMGHIHLSVKDSRKSSQFYQKVLGLEDKFSVPSASWIAAGDYHHHLAVNEWRGKGLASRKQGLPGLAYYVIEVA HKKELLTIAQRAQEVDAPIKWMTSSKLEITDSDGIVTRIRLAR
Specific function: Involved in the meta cleavage of catechol to 2- hydroxymuconic semialdehyde. Essential for growth and viability in the presence of catechol and probably involved in the detoxification of catechol [H]
COG id: COG2514
COG function: function code R; Predicted ring-cleavage extradiol dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 - InterPro: IPR000486 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: =1.13.11.2 [H]
Molecular weight: Translated: 31724; Mature: 31592
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS00934 GLYOXALASE_I_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYEYKSHIYLAETALNVKDLASQTAFYQQVIGLEILSQTETESILGLGGKVLVQLIQAQ CCEEECCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHH ESGEVREHYGLYHLAILLPTRKALADVLKHLTDLQIPLVGGADHGYSEAIYLEDLEGNGI CCCCHHHHHCEEEEEEEECCHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCCCE ELYRDKPVSTWDIREDGRIIGVTEALAAQDIYELGERVEPFILAEGTRMGHIHLSVKDSR EEEECCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEEEEEECCC KSSQFYQKVLGLEDKFSVPSASWIAAGDYHHHLAVNEWRGKGLASRKQGLPGLAYYVIEV HHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCHHHCCCCHHHHHHHHH AHKKELLTIAQRAQEVDAPIKWMTSSKLEITDSDGIVTRIRLAR HHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCEEEEEEECC >Mature Secondary Structure TYEYKSHIYLAETALNVKDLASQTAFYQQVIGLEILSQTETESILGLGGKVLVQLIQAQ CEEECCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHH ESGEVREHYGLYHLAILLPTRKALADVLKHLTDLQIPLVGGADHGYSEAIYLEDLEGNGI CCCCHHHHHCEEEEEEEECCHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCCCE ELYRDKPVSTWDIREDGRIIGVTEALAAQDIYELGERVEPFILAEGTRMGHIHLSVKDSR EEEECCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEEEEEECCC KSSQFYQKVLGLEDKFSVPSASWIAAGDYHHHLAVNEWRGKGLASRKQGLPGLAYYVIEV HHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCHHHCCCCHHHHHHHHH AHKKELLTIAQRAQEVDAPIKWMTSSKLEITDSDGIVTRIRLAR HHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8704981; 9384377 [H]