Definition | Streptococcus pneumoniae D39, complete genome. |
---|---|
Accession | NC_008533 |
Length | 2,046,115 |
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The map label for this gene is 116517068
Identifier: 116517068
GI number: 116517068
Start: 852979
End: 853194
Strand: Direct
Name: 116517068
Synonym: SPD_0837
Alternate gene names: NA
Gene position: 852979-853194 (Clockwise)
Preceding gene: 116515585
Following gene: 116516028
Centisome position: 41.69
GC content: 41.2
Gene sequence:
>216_bases ATGAGAAAATCATTTTACACTTGGCTCATGACCGAGCGCAATCCTAAAAGTAACAGTCCCAAAGCAATTTTGGCAGACCT CGCTTTTGAAGAGGCAGCTTTTCCAAAACATACAGATGATTTTGATGAGGTCAGTCGCTTTTTGGAGGAGCATGCCAGTT TCTCTTTTAACCTAGGAGATTTTGACAGCATTTGGCAGGAATATCTAGAACACTAG
Upstream 100 bases:
>100_bases GCATTTCTAAAGGTCAGTTCAAGAAAGCTTTAGGTGGTCTTATGAAGGCTGGTAAAATCAAGCAGGACCAGTTTGGGACA GAGTTGATTTAGGGAGGCTT
Downstream 100 bases:
>100_bases CATTTATTCATTGGGTTTGGGCTAGTAATTTCTCCATCCCTCTGCTATAATAAAAAGAAATAAAAGGATTAGAGAGGTTC TTTATTTGAAGGAACATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MRKSFYTWLMTERNPKSNSPKAILADLAFEEAAFPKHTDDFDEVSRFLEEHASFSFNLGDFDSIWQEYLEH
Sequences:
>Translated_71_residues MRKSFYTWLMTERNPKSNSPKAILADLAFEEAAFPKHTDDFDEVSRFLEEHASFSFNLGDFDSIWQEYLEH >Mature_71_residues MRKSFYTWLMTERNPKSNSPKAILADLAFEEAAFPKHTDDFDEVSRFLEEHASFSFNLGDFDSIWQEYLEH
Specific function: Unknown
COG id: COG4479
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0346 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010673 - InterPro: IPR023089 [H]
Pfam domain/function: PF06855 DUF1250 [H]
EC number: NA
Molecular weight: Translated: 8435; Mature: 8435
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSFYTWLMTERNPKSNSPKAILADLAFEEAAFPKHTDDFDEVSRFLEEHASFSFNLGD CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCC FDSIWQEYLEH HHHHHHHHHCC >Mature Secondary Structure MRKSFYTWLMTERNPKSNSPKAILADLAFEEAAFPKHTDDFDEVSRFLEEHASFSFNLGD CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCC FDSIWQEYLEH HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA