| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116517038
Identifier: 116517038
GI number: 116517038
Start: 952144
End: 954036
Strand: Direct
Name: 116517038
Synonym: SPD_0943
Alternate gene names: NA
Gene position: 952144-954036 (Clockwise)
Preceding gene: 116515485
Following gene: 116515471
Centisome position: 46.53
GC content: 27.36
Gene sequence:
>1893_bases ATGAAAAAATGTTGGCTTACAACAAACTTTGAAGACTATCTAAAAGCATTAAGTACAAACGAATTGACATTACTTGTGAA AAATTTAGAAATTGATTTGTCAGAAATTTCAATTTTTTACGATGTGAAGTTTGAATTTTATAAAAAGGACAGATTATCAA TAACAGACAAAGGAAAGACTGTAGATAGCGAGTCAATCATTATTTATATTGGAAGTAACACCAAGTGTCAGAAGATTGTA GAGTTATATGCAAGCAATAGAAAGTATAATTTTATTTCATATAAAAGTATAAATAATTTTTTGGATACTGAGTTTGAACA GAAATATGCTTATGTGACAATTGTCTGTAACTTTGATATTATTGATGACAGTATTTTTTATAAATGTACTAACAAATTTA ACGTAAATAATATTTATACTTCTGTAGGTTTTTTTTTGTATGATGACATATATGATTTAACTTATCAGGTATTTAAAACA GTTTCCTTAGAAAATACCTTTAGAGATAATTCTTTATTGATCACACACGATGAAAAGATAAAAAATAAAAACTATTATAA TTTCTTTGATTCTGAGAAGGGAAAATTCCCATATACTGATGAGATGGATATTTTTTCATTCCATGGACACAGTCGAGAAG ATAAACTCTTTATTTATAATGGATATGTATGTTGTACAAATAATGATAATAATGTGATGGAAACGAGAAATATCAATGAT ATTCCTCATTGGGCTAAAAATCCAGAATACTATGAGGGAAAAAAGGACATAGTAGATATTAAAGAAATAAAATGTAAAAT TGCCTTTTTAAATTCTTGTAGTGGTATTCACTTAAAAAAAAGTCTATATCGAAAGGAATATTGGATTTCTGAAGGCTTTC GTGTTAGCTATCCAGCTGTAGTAATTGGGAGTACTATTATTAAAGATGGTAGTAGTATTGAAAATATATTCTTTATAGAA TTAATAAAAGCTGGATATAGTGTGGGGGAATCAGTTAATGTTTTGAACAAAATGTCAAAAGCCTTAAAGTATGATACTGG TTCGTTTTGTATTTTAGGTGCTCCTGAATTTAGGCTGACAACTCCAAATAGTAGGTTTGAGAATACATTGCATGAAATCC AACAATTCACTGAAAATCTTATTGTTCTGAAAAATCGTTTAAAAAAATATTTGGAAATTTTTCATAAACAAAAGAGAATA GATATTTATGGTATAAAAGATAAACGAATTCAAAATATACAAATGAATGTAGGCAATCAGCTACAATCGCTTGTGAGAAA AATCAATATTTCAAATATACATAGATATAACTTAGGTCAATTAAATCATGAAATGGATAGTCTAGAAAGTCAATTAACGG ATTTACAGAATAGAATAATTTCCGATTTGAGTACGAAAACTAGAACAGGAAATTATTTATTTTCAGAGTATTATCATGAA CTTTCAGAAATAGATTATGAAGAGTTTCGAGAAAACTCTTGTCCCAATTGTAATAATTCCATTCTGCTACAGAAATTCAC AGTAGTCCCAGAAAATATAAATAGGTTTGTGTATAAATGTTCAAGATGTGGTACATCAATTGATTTACCTAGTAATGTTT TTGTAGATATAAATTTAAAAATTGAAATTAATATTGAAGAATTAGAGATAAAGGTATTCTTTGATTATCAAAACCTCATT AAGAAAGGGGAATTTACAACAATAGATTGTGAAATATTAGAGGCCGATAGATATTCAATTGAAAGAGTAGTAGCTAATAA TCAAGATAATGTGCAGGGGGAGATTACTTTTAAATATAATCGCCAAAAGACACCGATGCAAGTATATTATTTGAAAGCAT ATGTAATGATCGATGGTCAGTTACTACATAGGAGTATTCCTATAAATTTGTAA
Upstream 100 bases:
>100_bases TATGTTATTGAAGTTGATTTAGTAGAGAGTGAAATTGATATTATTCGGACAATTTCTCATGTAGAGGAGCTGTTATGAAT TTAAGGAAGAGAGTTAAGAT
Downstream 100 bases:
>100_bases GTTAGTTAAGAATTGTTGGTGATTAGACATGGAATCAAAAATTTCAATTTTAGATAGACTATATTCATGGATTTATATTA AGAAATTAAAAAAACTAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 630; Mature: 630
Protein sequence:
>630_residues MKKCWLTTNFEDYLKALSTNELTLLVKNLEIDLSEISIFYDVKFEFYKKDRLSITDKGKTVDSESIIIYIGSNTKCQKIV ELYASNRKYNFISYKSINNFLDTEFEQKYAYVTIVCNFDIIDDSIFYKCTNKFNVNNIYTSVGFFLYDDIYDLTYQVFKT VSLENTFRDNSLLITHDEKIKNKNYYNFFDSEKGKFPYTDEMDIFSFHGHSREDKLFIYNGYVCCTNNDNNVMETRNIND IPHWAKNPEYYEGKKDIVDIKEIKCKIAFLNSCSGIHLKKSLYRKEYWISEGFRVSYPAVVIGSTIIKDGSSIENIFFIE LIKAGYSVGESVNVLNKMSKALKYDTGSFCILGAPEFRLTTPNSRFENTLHEIQQFTENLIVLKNRLKKYLEIFHKQKRI DIYGIKDKRIQNIQMNVGNQLQSLVRKINISNIHRYNLGQLNHEMDSLESQLTDLQNRIISDLSTKTRTGNYLFSEYYHE LSEIDYEEFRENSCPNCNNSILLQKFTVVPENINRFVYKCSRCGTSIDLPSNVFVDINLKIEINIEELEIKVFFDYQNLI KKGEFTTIDCEILEADRYSIERVVANNQDNVQGEITFKYNRQKTPMQVYYLKAYVMIDGQLLHRSIPINL
Sequences:
>Translated_630_residues MKKCWLTTNFEDYLKALSTNELTLLVKNLEIDLSEISIFYDVKFEFYKKDRLSITDKGKTVDSESIIIYIGSNTKCQKIV ELYASNRKYNFISYKSINNFLDTEFEQKYAYVTIVCNFDIIDDSIFYKCTNKFNVNNIYTSVGFFLYDDIYDLTYQVFKT VSLENTFRDNSLLITHDEKIKNKNYYNFFDSEKGKFPYTDEMDIFSFHGHSREDKLFIYNGYVCCTNNDNNVMETRNIND IPHWAKNPEYYEGKKDIVDIKEIKCKIAFLNSCSGIHLKKSLYRKEYWISEGFRVSYPAVVIGSTIIKDGSSIENIFFIE LIKAGYSVGESVNVLNKMSKALKYDTGSFCILGAPEFRLTTPNSRFENTLHEIQQFTENLIVLKNRLKKYLEIFHKQKRI DIYGIKDKRIQNIQMNVGNQLQSLVRKINISNIHRYNLGQLNHEMDSLESQLTDLQNRIISDLSTKTRTGNYLFSEYYHE LSEIDYEEFRENSCPNCNNSILLQKFTVVPENINRFVYKCSRCGTSIDLPSNVFVDINLKIEINIEELEIKVFFDYQNLI KKGEFTTIDCEILEADRYSIERVVANNQDNVQGEITFKYNRQKTPMQVYYLKAYVMIDGQLLHRSIPINL >Mature_630_residues MKKCWLTTNFEDYLKALSTNELTLLVKNLEIDLSEISIFYDVKFEFYKKDRLSITDKGKTVDSESIIIYIGSNTKCQKIV ELYASNRKYNFISYKSINNFLDTEFEQKYAYVTIVCNFDIIDDSIFYKCTNKFNVNNIYTSVGFFLYDDIYDLTYQVFKT VSLENTFRDNSLLITHDEKIKNKNYYNFFDSEKGKFPYTDEMDIFSFHGHSREDKLFIYNGYVCCTNNDNNVMETRNIND IPHWAKNPEYYEGKKDIVDIKEIKCKIAFLNSCSGIHLKKSLYRKEYWISEGFRVSYPAVVIGSTIIKDGSSIENIFFIE LIKAGYSVGESVNVLNKMSKALKYDTGSFCILGAPEFRLTTPNSRFENTLHEIQQFTENLIVLKNRLKKYLEIFHKQKRI DIYGIKDKRIQNIQMNVGNQLQSLVRKINISNIHRYNLGQLNHEMDSLESQLTDLQNRIISDLSTKTRTGNYLFSEYYHE LSEIDYEEFRENSCPNCNNSILLQKFTVVPENINRFVYKCSRCGTSIDLPSNVFVDINLKIEINIEELEIKVFFDYQNLI KKGEFTTIDCEILEADRYSIERVVANNQDNVQGEITFKYNRQKTPMQVYYLKAYVMIDGQLLHRSIPINL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74048; Mature: 74048
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKCWLTTNFEDYLKALSTNELTLLVKNLEIDLSEISIFYDVKFEFYKKDRLSITDKGKT CCEEEEECCHHHHHHHHCCCCEEEEEEECEEEEEEEEEEEEEEEEEEECCCCEEECCCCE VDSESIIIYIGSNTKCQKIVELYASNRKYNFISYKSINNFLDTEFEQKYAYVTIVCNFDI ECCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCHHCCEEEEEEEEEEEE IDDSIFYKCTNKFNVNNIYTSVGFFLYDDIYDLTYQVFKTVSLENTFRDNSLLITHDEKI ECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHH KNKNYYNFFDSEKGKFPYTDEMDIFSFHGHSREDKLFIYNGYVCCTNNDNNVMETRNIND CCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEEEECCCCCEEEECCCCC IPHWAKNPEYYEGKKDIVDIKEIKCKIAFLNSCSGIHLKKSLYRKEYWISEGFRVSYPAV CCCCCCCCCCCCCCCCCEEHHHEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCEE VIGSTIIKDGSSIENIFFIELIKAGYSVGESVNVLNKMSKALKYDTGSFCILGAPEFRLT EECCHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCEEEE TPNSRFENTLHEIQQFTENLIVLKNRLKKYLEIFHKQKRIDIYGIKDKRIQNIQMNVGNQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCHH LQSLVRKINISNIHRYNLGQLNHEMDSLESQLTDLQNRIISDLSTKTRTGNYLFSEYYHE HHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH LSEIDYEEFRENSCPNCNNSILLQKFTVVPENINRFVYKCSRCGTSIDLPSNVFVDINLK HHHCCHHHHHCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE IEINIEELEIKVFFDYQNLIKKGEFTTIDCEILEADRYSIERVVANNQDNVQGEITFKYN EEEEEEEEEEEEEECHHHHHCCCCEEEEEEEEEECCCHHHHHHHCCCCCCCEEEEEEEEC RQKTPMQVYYLKAYVMIDGQLLHRSIPINL CCCCCEEEEEEEEEEEECCEEEECCCCCCC >Mature Secondary Structure MKKCWLTTNFEDYLKALSTNELTLLVKNLEIDLSEISIFYDVKFEFYKKDRLSITDKGKT CCEEEEECCHHHHHHHHCCCCEEEEEEECEEEEEEEEEEEEEEEEEEECCCCEEECCCCE VDSESIIIYIGSNTKCQKIVELYASNRKYNFISYKSINNFLDTEFEQKYAYVTIVCNFDI ECCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCHHCCEEEEEEEEEEEE IDDSIFYKCTNKFNVNNIYTSVGFFLYDDIYDLTYQVFKTVSLENTFRDNSLLITHDEKI ECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHH KNKNYYNFFDSEKGKFPYTDEMDIFSFHGHSREDKLFIYNGYVCCTNNDNNVMETRNIND CCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEEEECCCCCEEEECCCCC IPHWAKNPEYYEGKKDIVDIKEIKCKIAFLNSCSGIHLKKSLYRKEYWISEGFRVSYPAV CCCCCCCCCCCCCCCCCEEHHHEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCEE VIGSTIIKDGSSIENIFFIELIKAGYSVGESVNVLNKMSKALKYDTGSFCILGAPEFRLT EECCHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCEEEE TPNSRFENTLHEIQQFTENLIVLKNRLKKYLEIFHKQKRIDIYGIKDKRIQNIQMNVGNQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCHH LQSLVRKINISNIHRYNLGQLNHEMDSLESQLTDLQNRIISDLSTKTRTGNYLFSEYYHE HHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH LSEIDYEEFRENSCPNCNNSILLQKFTVVPENINRFVYKCSRCGTSIDLPSNVFVDINLK HHHCCHHHHHCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE IEINIEELEIKVFFDYQNLIKKGEFTTIDCEILEADRYSIERVVANNQDNVQGEITFKYN EEEEEEEEEEEEEECHHHHHCCCCEEEEEEEEEECCCHHHHHHHCCCCCCCEEEEEEEEC RQKTPMQVYYLKAYVMIDGQLLHRSIPINL CCCCCEEEEEEEEEEEECCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA