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The map label for this gene is tcsA [H]

Identifier: 116516951

GI number: 116516951

Start: 750425

End: 751477

Strand: Direct

Name: tcsA [H]

Synonym: SPD_0739

Alternate gene names: 116516951

Gene position: 750425-751477 (Clockwise)

Preceding gene: 116516117

Following gene: 116515854

Centisome position: 36.68

GC content: 41.88

Gene sequence:

>1053_bases
ATGAACAAGAAACAATGGCTAGGTCTTGGCCTAGTTGCAGTGGCAGCAGTTGGACTTGCTGCATGTGGTAACCGCTCTTC
TCGTAACGCAGCTTCATCTTCTGATGTGAAGACAAAAGCAGCAATCGTCACTGATACTGGTGGTGTTGATGACAAATCAT
TCGACCAATCAGCTTGGGAAGGTTTGCAGGCTTGGGGTAAAGAACACAATCTTTCAAAAGATAACGGTTTCACTTACTTC
CAATCAACAAGTGAAGCTGACTACGCTAACAACTTGCAACAAGCGGCTGGAAGTTACAACCTAATCTTTGGTGTTGGTTT
TGCCCTTCATAATGCAGTTGAAGAAGTAGCTAAAGAACACACTGACTTGAACTATGTCTTGATTGATGATGTGATTAAAG
ACCAAAAGAATGTTGCGAGCGTAACTTTCGCTGATAATGAGTCAGGTTACCTTGCAGGTGTGGCTGCAGCAAAAACAACT
AAGACAAAACAAGTTGGTTTTGTAGGTGGTATCGAATCTGAAGTTATCTCTCGTTTTGAAGCAGGATTCAAGGCTGGTGT
TGCGTCAGTAGACCCTTCTATCAAAGTCCAAGTTGACTACGCTGGTTCATTTGGTGATGCAGCTAAAGGTAAAACAATTG
CAGCCGCACAATACGCAGCCGGTGCAGATATTGTTTACCAAGTAGCTGGTGGTACAGGTGCAGGTGTCTTTGCAGAGGCA
AAATCTCTCAACGAAAGCCGTCCTGAAAATGAAAAAGTTTGGGTTATCGGTGTTGACCGTGACCAAGAAGCAGAAGGTAA
ATACACTTCTAAAGATGGCAAAGAATCAAACTTTGTTCTTGTATCTACTTTGAAACAAGTTGGTACAACTGTAAAAGATA
TTTCTAACAAGGCAGAAAAAGGAGAATTCCCTGGCGGTCAAGTGATCGTTTACTCATTGAAGGATAAAGGGGTTGACTTG
GCAGTAACAAACCTTTCAGAAGAAGGTAAAAAAGCTGTCGAAGATGCAAAAGCTAAAATCCTTGATGGAAGCGTAAAAGT
TCCTGAAAAATAA

Upstream 100 bases:

>100_bases
ACTTAAACTAGTCTGAGTCGCTCTCTGAGTGGCACGGTCCTTGTGGCCAACCAATCCATACTTGCAACATCGTTGCACAT
CTTATTTAGGAGGTTCAGTA

Downstream 100 bases:

>100_bases
TGGATGGAAGTCATTTCTTAGGAAGCGGCCAAGGGCCGCTTTTTTAAGAGTTGAGACAAAGTCATTTTGTCTCAGTAAAG
CTTGCTACTAGACAAACTAG

Product: membrane lipoprotein TmpC precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MNKKQWLGLGLVAVAAVGLAACGNRSSRNAASSSDVKTKAAIVTDTGGVDDKSFDQSAWEGLQAWGKEHNLSKDNGFTYF
QSTSEADYANNLQQAAGSYNLIFGVGFALHNAVEEVAKEHTDLNYVLIDDVIKDQKNVASVTFADNESGYLAGVAAAKTT
KTKQVGFVGGIESEVISRFEAGFKAGVASVDPSIKVQVDYAGSFGDAAKGKTIAAAQYAAGADIVYQVAGGTGAGVFAEA
KSLNESRPENEKVWVIGVDRDQEAEGKYTSKDGKESNFVLVSTLKQVGTTVKDISNKAEKGEFPGGQVIVYSLKDKGVDL
AVTNLSEEGKKAVEDAKAKILDGSVKVPEK

Sequences:

>Translated_350_residues
MNKKQWLGLGLVAVAAVGLAACGNRSSRNAASSSDVKTKAAIVTDTGGVDDKSFDQSAWEGLQAWGKEHNLSKDNGFTYF
QSTSEADYANNLQQAAGSYNLIFGVGFALHNAVEEVAKEHTDLNYVLIDDVIKDQKNVASVTFADNESGYLAGVAAAKTT
KTKQVGFVGGIESEVISRFEAGFKAGVASVDPSIKVQVDYAGSFGDAAKGKTIAAAQYAAGADIVYQVAGGTGAGVFAEA
KSLNESRPENEKVWVIGVDRDQEAEGKYTSKDGKESNFVLVSTLKQVGTTVKDISNKAEKGEFPGGQVIVYSLKDKGVDL
AVTNLSEEGKKAVEDAKAKILDGSVKVPEK
>Mature_350_residues
MNKKQWLGLGLVAVAAVGLAACGNRSSRNAASSSDVKTKAAIVTDTGGVDDKSFDQSAWEGLQAWGKEHNLSKDNGFTYF
QSTSEADYANNLQQAAGSYNLIFGVGFALHNAVEEVAKEHTDLNYVLIDDVIKDQKNVASVTFADNESGYLAGVAAAKTT
KTKQVGFVGGIESEVISRFEAGFKAGVASVDPSIKVQVDYAGSFGDAAKGKTIAAAQYAAGADIVYQVAGGTGAGVFAEA
KSLNESRPENEKVWVIGVDRDQEAEGKYTSKDGKESNFVLVSTLKQVGTTVKDISNKAEKGEFPGGQVIVYSLKDKGVDL
AVTNLSEEGKKAVEDAKAKILDGSVKVPEK

Specific function: Unknown

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 36785; Mature: 36785

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKQWLGLGLVAVAAVGLAACGNRSSRNAASSSDVKTKAAIVTDTGGVDDKSFDQSAWE
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHH
GLQAWGKEHNLSKDNGFTYFQSTSEADYANNLQQAAGSYNLIFGVGFALHNAVEEVAKEH
HHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHH
TDLNYVLIDDVIKDQKNVASVTFADNESGYLAGVAAAKTTKTKQVGFVGGIESEVISRFE
CCCEEEEEHHHHCCCCCEEEEEEECCCCCEEEEEEHHCCCCCCCCEEECCHHHHHHHHHH
AGFKAGVASVDPSIKVQVDYAGSFGDAAKGKTIAAAQYAAGADIVYQVAGGTGAGVFAEA
HHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEHHHCCCCCEEEEECCCCCCCHHHHH
KSLNESRPENEKVWVIGVDRDQEAEGKYTSKDGKESNFVLVSTLKQVGTTVKDISNKAEK
HHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEHEEHHHHHCCHHHHHHCHHHC
GEFPGGQVIVYSLKDKGVDLAVTNLSEEGKKAVEDAKAKILDGSVKVPEK
CCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHEECCCCCCCCC
>Mature Secondary Structure
MNKKQWLGLGLVAVAAVGLAACGNRSSRNAASSSDVKTKAAIVTDTGGVDDKSFDQSAWE
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHH
GLQAWGKEHNLSKDNGFTYFQSTSEADYANNLQQAAGSYNLIFGVGFALHNAVEEVAKEH
HHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHH
TDLNYVLIDDVIKDQKNVASVTFADNESGYLAGVAAAKTTKTKQVGFVGGIESEVISRFE
CCCEEEEEHHHHCCCCCEEEEEEECCCCCEEEEEEHHCCCCCCCCEEECCHHHHHHHHHH
AGFKAGVASVDPSIKVQVDYAGSFGDAAKGKTIAAAQYAAGADIVYQVAGGTGAGVFAEA
HHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEHHHCCCCCEEEEECCCCCCCHHHHH
KSLNESRPENEKVWVIGVDRDQEAEGKYTSKDGKESNFVLVSTLKQVGTTVKDISNKAEK
HHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEHEEHHHHHCCHHHHHHCHHHC
GEFPGGQVIVYSLKDKGVDLAVTNLSEEGKKAVEDAKAKILDGSVKVPEK
CCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]