| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116516916
Identifier: 116516916
GI number: 116516916
Start: 907590
End: 908219
Strand: Direct
Name: 116516916
Synonym: SPD_0893
Alternate gene names: NA
Gene position: 907590-908219 (Clockwise)
Preceding gene: 116516522
Following gene: 116517033
Centisome position: 44.36
GC content: 38.25
Gene sequence:
>630_bases TTGAGCAAGGCAAATCAACTCTTGGAACAAATCCATGAAGAAGGAATCAGACAATCCTTGGCAGAAGAAGTAGAAAATCT AAAAGCTGCCACAAACAAGGCTGATGCAGACTTGGATGAAGTAAACAGTCAGGTAAAAGATGTCTTGACTCGTATCGCTA GCGCCCTTCAACAAGAAAAGGAAAATGCTGAGCAAGATCCTCAGACACTTGTACTCTATCAAAAACTCTACGATATTCTC ATGTCGCTTCACTCTTATTTAGAAAGTAATAATGGATCTGATGCGGACTTTGATAAGGTGGCTGCATTATTAGATCAACT TTCTGCTAAGAGTAAAGACAAAACAGCTTTACTTGAATCGACAAAAGCTATTCTAGTTTTGAATCATCAAATCCAGTCAA AAGCTAGCGCAAGTGAAGAAACAAGTCCAGCAAGAAATGCTGAAGCAAATGGTGATAACACCAGTGCTGAGAACCAACCA AACGCAACTGCAGAATCTAACATTGAAACTGCTAGCGACGAAAACAAACCAAGCAATACAAGAGATTCTAAACCTGCTGA ATCAACTTCAGAAAATAAAACAACAGAATCTTCTACAACTACTGGAAATCAAGAAAAACCAGTAGAATAA
Upstream 100 bases:
>100_bases GGCCTTGTAATCTTGTATTATAACTCTCCTGTTTTAGGAATACATGGTAGATAGCAACCAATAATCTGCGACAGATAGCA AGGAAGAAGTAGAAAGTCTT
Downstream 100 bases:
>100_bases AAAGAAAGGCGAAGTAGCTGAGCTACCTCGTCTTTTTAGCTTTTATAAGCTACGTACGATGCCAATGATGGTATCAACTG CACGTTCCATAGTCTGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MSKANQLLEQIHEEGIRQSLAEEVENLKAATNKADADLDEVNSQVKDVLTRIASALQQEKENAEQDPQTLVLYQKLYDIL MSLHSYLESNNGSDADFDKVAALLDQLSAKSKDKTALLESTKAILVLNHQIQSKASASEETSPARNAEANGDNTSAENQP NATAESNIETASDENKPSNTRDSKPAESTSENKTTESSTTTGNQEKPVE
Sequences:
>Translated_209_residues MSKANQLLEQIHEEGIRQSLAEEVENLKAATNKADADLDEVNSQVKDVLTRIASALQQEKENAEQDPQTLVLYQKLYDIL MSLHSYLESNNGSDADFDKVAALLDQLSAKSKDKTALLESTKAILVLNHQIQSKASASEETSPARNAEANGDNTSAENQP NATAESNIETASDENKPSNTRDSKPAESTSENKTTESSTTTGNQEKPVE >Mature_208_residues SKANQLLEQIHEEGIRQSLAEEVENLKAATNKADADLDEVNSQVKDVLTRIASALQQEKENAEQDPQTLVLYQKLYDILM SLHSYLESNNGSDADFDKVAALLDQLSAKSKDKTALLESTKAILVLNHQIQSKASASEETSPARNAEANGDNTSAENQPN ATAESNIETASDENKPSNTRDSKPAESTSENKTTESSTTTGNQEKPVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22706; Mature: 22574
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKANQLLEQIHEEGIRQSLAEEVENLKAATNKADADLDEVNSQVKDVLTRIASALQQEK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ENAEQDPQTLVLYQKLYDILMSLHSYLESNNGSDADFDKVAALLDQLSAKSKDKTALLES HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH TKAILVLNHQIQSKASASEETSPARNAEANGDNTSAENQPNATAESNIETASDENKPSNT CCHHEEECHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCC RDSKPAESTSENKTTESSTTTGNQEKPVE CCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKANQLLEQIHEEGIRQSLAEEVENLKAATNKADADLDEVNSQVKDVLTRIASALQQEK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ENAEQDPQTLVLYQKLYDILMSLHSYLESNNGSDADFDKVAALLDQLSAKSKDKTALLES HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH TKAILVLNHQIQSKASASEETSPARNAEANGDNTSAENQPNATAESNIETASDENKPSNT CCHHEEECHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCC RDSKPAESTSENKTTESSTTTGNQEKPVE CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA