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The map label for this gene is ybhL [C]

Identifier: 116516865

GI number: 116516865

Start: 1767254

End: 1767961

Strand: Reverse

Name: ybhL [C]

Synonym: SPD_1769

Alternate gene names: 116516865

Gene position: 1767961-1767254 (Counterclockwise)

Preceding gene: 116516909

Following gene: 116515784

Centisome position: 86.41

GC content: 42.8

Gene sequence:

>708_bases
ATGTTCACAGAAAAGGAGAAAAGGATGAATCACACTATTATACATGACCGTGCAGGTCTCAATCAATTTTACGCTAAGGT
TTATGCCTTTGTTGGTCTGGGAATCGGACTATCTGCTTTGGTATCAGGCCTTATGTTGACGGTCTTTCAGTCTCAGTTGG
TTTACTTGTTGATGCAGGGGCGTCTCTGGTTGACCATTGCTACTTTTGCGGAGTTGGCTTTGGTTTTCGTTGCCAGTAGC
ATGGCTTCAAGAAATAGTCCAGCTGCTCTTCCAGTATTTTTACTTTACTCCGTTTTAAACGGCTTTACCCTTAGTTTTGT
GGTGGCTTTCTATACTCCGGGTACAGTTTTATCTGCCTTTGTATCGAGCGCCCTTCTCTTCTTTGTCATGGCGGCAGTTG
GTATCTTTACCAAGAAAGACTTGAGTGGGATTGGTCGAGCAATGATGGCAGCTCTCATTGGTTTACTGATTGCTATGGTA
GTCAATATTTTCTTGGCTAGTGGCTTCTTTGATTATATGATTAGCGTAGCCATGGTTTTGGTTTTTTCAGGGTTGATTGC
TTGGGATAACCAAAAGATTCGCCTCGCCTATGAACAATCACAAGGTCGTGTAGCGACAGGCTGGGTGGTGTCAATGGCTC
TCAGCATCTATCTTGATTTTATCAATCTTTTCCTAAGTATTCTACGTATCTTTGGTCGCAATGACTAA

Upstream 100 bases:

>100_bases
ATGAAGGGGCAGGCCGAGAGTTTGAATGTTGCAGTTGCAGCCGGTATTTTAATCTTCCATTTAAGCTAATTTTAACTTTT
TTTGTTATAATCAAGGAAAG

Downstream 100 bases:

>100_bases
AAGGTCTATGAAATCAGTGTTTTGAGTGACACTGATTTTTTTTAAATTTTCTCTTTTCTTTTCTTGGAAATAGGTGTATA
ATACGTTTATTAAATTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MFTEKEKRMNHTIIHDRAGLNQFYAKVYAFVGLGIGLSALVSGLMLTVFQSQLVYLLMQGRLWLTIATFAELALVFVASS
MASRNSPAALPVFLLYSVLNGFTLSFVVAFYTPGTVLSAFVSSALLFFVMAAVGIFTKKDLSGIGRAMMAALIGLLIAMV
VNIFLASGFFDYMISVAMVLVFSGLIAWDNQKIRLAYEQSQGRVATGWVVSMALSIYLDFINLFLSILRIFGRND

Sequences:

>Translated_235_residues
MFTEKEKRMNHTIIHDRAGLNQFYAKVYAFVGLGIGLSALVSGLMLTVFQSQLVYLLMQGRLWLTIATFAELALVFVASS
MASRNSPAALPVFLLYSVLNGFTLSFVVAFYTPGTVLSAFVSSALLFFVMAAVGIFTKKDLSGIGRAMMAALIGLLIAMV
VNIFLASGFFDYMISVAMVLVFSGLIAWDNQKIRLAYEQSQGRVATGWVVSMALSIYLDFINLFLSILRIFGRND
>Mature_235_residues
MFTEKEKRMNHTIIHDRAGLNQFYAKVYAFVGLGIGLSALVSGLMLTVFQSQLVYLLMQGRLWLTIATFAELALVFVASS
MASRNSPAALPVFLLYSVLNGFTLSFVVAFYTPGTVLSAFVSSALLFFVMAAVGIFTKKDLSGIGRAMMAALIGLLIAMV
VNIFLASGFFDYMISVAMVLVFSGLIAWDNQKIRLAYEQSQGRVATGWVVSMALSIYLDFINLFLSILRIFGRND

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787004, Length=229, Percent_Identity=37.9912663755458, Blast_Score=127, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 25813; Mature: 25813

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTEKEKRMNHTIIHDRAGLNQFYAKVYAFVGLGIGLSALVSGLMLTVFQSQLVYLLMQG
CCCCHHHHHCHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
RLWLTIATFAELALVFVASSMASRNSPAALPVFLLYSVLNGFTLSFVVAFYTPGTVLSAF
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
VSSALLFFVMAAVGIFTKKDLSGIGRAMMAALIGLLIAMVVNIFLASGFFDYMISVAMVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFSGLIAWDNQKIRLAYEQSQGRVATGWVVSMALSIYLDFINLFLSILRIFGRND
HHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFTEKEKRMNHTIIHDRAGLNQFYAKVYAFVGLGIGLSALVSGLMLTVFQSQLVYLLMQG
CCCCHHHHHCHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
RLWLTIATFAELALVFVASSMASRNSPAALPVFLLYSVLNGFTLSFVVAFYTPGTVLSAF
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
VSSALLFFVMAAVGIFTKKDLSGIGRAMMAALIGLLIAMVVNIFLASGFFDYMISVAMVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFSGLIAWDNQKIRLAYEQSQGRVATGWVVSMALSIYLDFINLFLSILRIFGRND
HHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12122206; 12799345 [H]