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The map label for this gene is clgD

Identifier: 116516816

GI number: 116516816

Start: 1840401

End: 1840805

Strand: Reverse

Name: clgD

Synonym: SPD_1860

Alternate gene names: NA

Gene position: 1840805-1840401 (Counterclockwise)

Preceding gene: 116515910

Following gene: 116516170

Centisome position: 89.97

GC content: 42.22

Gene sequence:

>405_bases
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTCCAGTCCACTTTTTCAGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCTAGTCAACAAAAGACTAGTTTGAACTTGGATGGGCAGATGATTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Upstream 100 bases:

>100_bases
AGCCTAAGAAAGTTACAAGCAGATGGACGCATCACGGAAGAACAGGCTAAAGCTTATAAAGAATACCATGATAAAAATGG
AGGAGCAAATCGTAAAGTCA

Downstream 100 bases:

>100_bases
GGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTTTGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAA
AAAATAGGCAAGAGGAAGCA

Product: competence protein CglD

Products: NA

Alternate protein names: Competence Protein ComYD; Competence Protein CglD

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFSAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQMISNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Sequences:

>Translated_134_residues
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFSAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQMISNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN
>Mature_134_residues
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFSAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQMISNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14685; Mature: 14685

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFSAVEEQIFFMEFEELYRETQKRSVASQQ
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTSLNLDGQMISNGSQKLTVPKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLY
HHCCCCCCCEECCCCCEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCEEEEEEE
LGNGKIKRIKETKN
ECCCCEEECCCCCC
>Mature Secondary Structure
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFSAVEEQIFFMEFEELYRETQKRSVASQQ
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTSLNLDGQMISNGSQKLTVPKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLY
HHCCCCCCCEECCCCCEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCEEEEEEE
LGNGKIKRIKETKN
ECCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA