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The map label for this gene is fucA [H]

Identifier: 116516769

GI number: 116516769

Start: 1969366

End: 1970004

Strand: Reverse

Name: fucA [H]

Synonym: SPD_1994

Alternate gene names: 116516769

Gene position: 1970004-1969366 (Counterclockwise)

Preceding gene: 116516651

Following gene: 116516128

Centisome position: 96.28

GC content: 36.78

Gene sequence:

>639_bases
ATGTCAGATGTAAAACAAGAATTAATTAAATATGGTAAGAAGCTAGTAGAAACAGATTTGACGAAAGGAACAGGTGGGAA
TCTCAGCGTTTTCGATCGTGAAAAACAATTGATGGCAATTACCCCGTCGGGTATTGATTTCTTTGAAATCAAAGAATCCG
ATATTGTAGTGATGGATATTAATGGAAATGTTGTAGAGGGAGAACGCTTGCCATCTAGCGAATGGTATATGCATTTGATT
CAATATCAAACTCGTGATGATATCGATGCAATTATCCATGCTCATACAACTTATGCAACAGTATTAGCTTGTCTCAGAGA
ACCACTTCCAGCGAGTCATTATATGATTGCAGTGGCAGGGAAAGATGTTCGGGTAGCTGAGTATGCAACATATGGTACGA
AAGAATTGGCTGTGAATGCAGCTAAAGCAATGGAAGGTCGTAGAGCAGTTTTACTAGCGAATCATGGAATTTTAGCAGGT
GCACAAAATTTATTGAATGCATTTAATATTGTTGAAGAAGTTGAATATTGTGCAAAAATTTATTGTTTAGCTAAGAATTT
TGGAGAGCCAGTAGTTCTTCCTGATGAGGAGATGGAATTGATGGCAGAAAAATTTAAAACATACGGTCAGAGAAAATAG

Upstream 100 bases:

>100_bases
TGTAAATTTGCCTCCCTCCCCCTTCTTAGCTTTTGTGCAGGAAGGGGGGATAATTGGTGAATTGAAAAATATTTAGTGTT
TTGATATGAGGAGGACAAGG

Downstream 100 bases:

>100_bases
GGAGGATATTAATGTTAAAACATATACCGAAAAATATTTCTCCAGATTTATTGAAGACTTTAATGGAAATGGGACATGGA
GATGAAATAGTATTAGCTGA

Product: L-fuculose phosphate aldolase

Products: NA

Alternate protein names: L-fuculose-1-phosphate aldolase [H]

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MSDVKQELIKYGKKLVETDLTKGTGGNLSVFDREKQLMAITPSGIDFFEIKESDIVVMDINGNVVEGERLPSSEWYMHLI
QYQTRDDIDAIIHAHTTYATVLACLREPLPASHYMIAVAGKDVRVAEYATYGTKELAVNAAKAMEGRRAVLLANHGILAG
AQNLLNAFNIVEEVEYCAKIYCLAKNFGEPVVLPDEEMELMAEKFKTYGQRK

Sequences:

>Translated_212_residues
MSDVKQELIKYGKKLVETDLTKGTGGNLSVFDREKQLMAITPSGIDFFEIKESDIVVMDINGNVVEGERLPSSEWYMHLI
QYQTRDDIDAIIHAHTTYATVLACLREPLPASHYMIAVAGKDVRVAEYATYGTKELAVNAAKAMEGRRAVLLANHGILAG
AQNLLNAFNIVEEVEYCAKIYCLAKNFGEPVVLPDEEMELMAEKFKTYGQRK
>Mature_211_residues
SDVKQELIKYGKKLVETDLTKGTGGNLSVFDREKQLMAITPSGIDFFEIKESDIVVMDINGNVVEGERLPSSEWYMHLIQ
YQTRDDIDAIIHAHTTYATVLACLREPLPASHYMIAVAGKDVRVAEYATYGTKELAVNAAKAMEGRRAVLLANHGILAGA
QNLLNAFNIVEEVEYCAKIYCLAKNFGEPVVLPDEEMELMAEKFKTYGQRK

Specific function: Fucose metabolism; third step. [C]

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789164, Length=212, Percent_Identity=41.9811320754717, Blast_Score=163, Evalue=1e-41,
Organism=Escherichia coli, GI1790642, Length=111, Percent_Identity=38.7387387387387, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1786247, Length=229, Percent_Identity=28.82096069869, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1789094, Length=183, Percent_Identity=27.8688524590164, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1790008, Length=221, Percent_Identity=27.6018099547511, Blast_Score=74, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303
- InterPro:   IPR004782 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: =4.1.2.17 [H]

Molecular weight: Translated: 23666; Mature: 23535

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVKQELIKYGKKLVETDLTKGTGGNLSVFDREKQLMAITPSGIDFFEIKESDIVVMDI
CCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCCEEEEECCCCEEEEEC
NGNVVEGERLPSSEWYMHLIQYQTRDDIDAIIHAHTTYATVLACLREPLPASHYMIAVAG
CCCEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
KDVRVAEYATYGTKELAVNAAKAMEGRRAVLLANHGILAGAQNLLNAFNIVEEVEYCAKI
CCEEEEHHHHCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
YCLAKNFGEPVVLPDEEMELMAEKFKTYGQRK
HHHHHCCCCCEECCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SDVKQELIKYGKKLVETDLTKGTGGNLSVFDREKQLMAITPSGIDFFEIKESDIVVMDI
CHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCCEEEEECCCCEEEEEC
NGNVVEGERLPSSEWYMHLIQYQTRDDIDAIIHAHTTYATVLACLREPLPASHYMIAVAG
CCCEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
KDVRVAEYATYGTKELAVNAAKAMEGRRAVLLANHGILAGAQNLLNAFNIVEEVEYCAKI
CCEEEEHHHHCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
YCLAKNFGEPVVLPDEEMELMAEKFKTYGQRK
HHHHHCCCCCEECCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]