| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116516667
Identifier: 116516667
GI number: 116516667
Start: 935489
End: 936100
Strand: Direct
Name: 116516667
Synonym: SPD_0922
Alternate gene names: NA
Gene position: 935489-936100 (Clockwise)
Preceding gene: 116515333
Following gene: 116515866
Centisome position: 45.72
GC content: 33.99
Gene sequence:
>612_bases GTGCTTATTTACATTAGCCTGATAATGAAAATGGAGAGATTATCGATGGTTATATTGGAATTGTACCAAAATGATTATTC TAAAGATTTAGTAGCATTTGATTCCATAGAAGATGGGAAAGCCTTTGTAGCTCAAATCCCGGGATACACTCTGGAAACAG AAGATGGTTTTGAAGTGGAGTATTTTAATCCTAAAAACATACCGGATTATATGGAAATTATTTTTAACGGAAATATTGTT CCTTTATCTAAATTTATGTTCGATCCTGGGGAAAATGTAAACATTATTTGGAAAGAGATTTCAAATTTATCCCTCAAAAA TGATAGAGTGATCGAAGGATATTCAAAAATTGATGCATATGTCGTTAACAACCATGAAGTTAAAGCCTATGTCGAAACAA GAGAAACGAACTATCGTAAAGCAAAAGACTTCTTAGAAAGCCGCGGATATGAAATCGACAGAAGCTTTTTCGGAAGTGAA GACGGTGAAGCGATTCTTTACAGAAAAAAAGGGATCGAAGTTTGGCATTTCTTGTGTCACTTAGACCCAATGTTTGTAGA GATTGAAGATGTAGAAGGATATGTTAAAGAAGAAGTTGGAGAGATTCAATAG
Upstream 100 bases:
>100_bases TGAGACCGAAGGTCGATAAGGTGTGTTCTGGGTATAGGACTCGTAAAGTAAGTAGGAAATATGATGAGATGATACAGAGA GCCTGAATTGGTCAGGTGAC
Downstream 100 bases:
>100_bases TCAACCAAAGTTCCTTGTGAGTATATACCTTTGCTAGTAAAAGAGTCAAAACGTTATAACGAAGGGGGGTAAGAAAACCC TTGAGTGTAAGTCTTTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MLIYISLIMKMERLSMVILELYQNDYSKDLVAFDSIEDGKAFVAQIPGYTLETEDGFEVEYFNPKNIPDYMEIIFNGNIV PLSKFMFDPGENVNIIWKEISNLSLKNDRVIEGYSKIDAYVVNNHEVKAYVETRETNYRKAKDFLESRGYEIDRSFFGSE DGEAILYRKKGIEVWHFLCHLDPMFVEIEDVEGYVKEEVGEIQ
Sequences:
>Translated_203_residues MLIYISLIMKMERLSMVILELYQNDYSKDLVAFDSIEDGKAFVAQIPGYTLETEDGFEVEYFNPKNIPDYMEIIFNGNIV PLSKFMFDPGENVNIIWKEISNLSLKNDRVIEGYSKIDAYVVNNHEVKAYVETRETNYRKAKDFLESRGYEIDRSFFGSE DGEAILYRKKGIEVWHFLCHLDPMFVEIEDVEGYVKEEVGEIQ >Mature_203_residues MLIYISLIMKMERLSMVILELYQNDYSKDLVAFDSIEDGKAFVAQIPGYTLETEDGFEVEYFNPKNIPDYMEIIFNGNIV PLSKFMFDPGENVNIIWKEISNLSLKNDRVIEGYSKIDAYVVNNHEVKAYVETRETNYRKAKDFLESRGYEIDRSFFGSE DGEAILYRKKGIEVWHFLCHLDPMFVEIEDVEGYVKEEVGEIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23752; Mature: 23752
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIYISLIMKMERLSMVILELYQNDYSKDLVAFDSIEDGKAFVAQIPGYTLETEDGFEVE CEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCEEECCCCCEEE YFNPKNIPDYMEIIFNGNIVPLSKFMFDPGENVNIIWKEISNLSLKNDRVIEGYSKIDAY EECCCCCHHHHHHEECCCEEEHHHHHCCCCCCCEEEEEECCCCCCCCCCEECCHHHEEEE VVNNHEVKAYVETRETNYRKAKDFLESRGYEIDRSFFGSEDGEAILYRKKGIEVWHFLCH EECCCEEEEEEECCCCCHHHHHHHHHHCCCEECHHHCCCCCCCEEEEEECCCHHHHHHHC LDPMFVEIEDVEGYVKEEVGEIQ CCCEEEEEECHHHHHHHHHCCCC >Mature Secondary Structure MLIYISLIMKMERLSMVILELYQNDYSKDLVAFDSIEDGKAFVAQIPGYTLETEDGFEVE CEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCEEECCCCCEEE YFNPKNIPDYMEIIFNGNIVPLSKFMFDPGENVNIIWKEISNLSLKNDRVIEGYSKIDAY EECCCCCHHHHHHEECCCEEEHHHHHCCCCCCCEEEEEECCCCCCCCCCEECCHHHEEEE VVNNHEVKAYVETRETNYRKAKDFLESRGYEIDRSFFGSEDGEAILYRKKGIEVWHFLCH EECCCEEEEEEECCCCCHHHHHHHHHHCCCEECHHHCCCCCCCEEEEEECCCHHHHHHHC LDPMFVEIEDVEGYVKEEVGEIQ CCCEEEEEECHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA