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The map label for this gene is yesN [H]

Identifier: 116516660

GI number: 116516660

Start: 162537

End: 163823

Strand: Direct

Name: yesN [H]

Synonym: SPD_0158

Alternate gene names: 116516660

Gene position: 162537-163823 (Clockwise)

Preceding gene: 116515317

Following gene: 116516260

Centisome position: 7.94

GC content: 40.79

Gene sequence:

>1287_bases
ATGTATAAAGTATTATTAGTAGATGATGAGTACATGGTGACAGAAGGTCTGAAGCGTTTGATTCCCTTTGATAAGTGGGA
TATGGAGGTCGTCGCAACAGCCAGTCATGCCGATGAAGCTCTAGAATATGTTCAGGAAAATCCTGTCGATGTCATCATTT
CCGATGTCAATATGCCAGACAAAACAGGGCTTGATATGATTCGGGAGATGAAAGAGATCTTACCAGATGCTGCCTATATC
CTGCTCTCAGGTTATCAGGAGTTTGATTATGTAAAAAGAGCAATGAACCTTAGTGTGGTGGACTATTTGGTCAAGCCTGT
TGATAAGGTAGAGCTGGGAAATCTGCTGGAGAAGATTGCAGGTCAGCTCGGCGAGAGAGGGAAGAAAAGTCAGACTCTTA
GTCAAGAATTAGACGAGGCTGGATTTGTTAGTTATTTAGGGGATAAGGAGAATTGGTGGATAGGTCTATCCAAGGAAAAA
CAAGGTTCCTTCACCATTCCCTACTATGTCTTGGGTCAAGCCTGGCAGATTTTCATTTCTGACCAACCCCTAGATGGTTT
AGTCGTTACACCTTTTGAAGCTCCTTATCAAGAACACTTTGAACGCTGGAAGCTGAATGCTGAGAAAACCCTCTTTTACG
GTTCTGTAAATCTGCAGCAGTCTGAGAGTCTCTTTGCCTATTACGAACCGATTTATAGGGTTATCATTCAGGGAAATCTC
AATCAAATCGTAGAAGAGTTAAATCTCTTGGAGAAGGTAGTTCTTGAAAATACGCCGCGAATTCCGATTACTAAACAGCT
TTTTATCCAGTTTGTCATGGATGTTTTCCATTTATTTGAACATCTCAAAGCTGATGATATGACGGACATTGTCAAAACCA
TTCATGCTATTCAATCCTTCGATGAATTGGTTTCTTATATCAAGGAAACTCTGATCAGCTTTTTCGGTCAATACCGTATG
AATGAAAATGTGGTCAGTGTGCTGGAAGTCATTGGTCGTGATTACCAAAAAGAGCTTTCCCTCAAGGATATCAGTAAGGC
CCTCTTTATCAATCCTGTCTATCTAGGGCAGTTGATTAAGCGTGAAACCGATTCGACCTTTGCAGAGTTACTAAACAAAC
AACGTATTAAGGCTGCCCAGCAGCTCTTGCTTTCAACCAGTGACAGCATCGAAGATATTTGTTATGCTGTTGGTTACAGT
AACCTTGGATATTTCTATAAAGTTTTCCGAAAATTGTGCGGAAAATCGCCAAAAGCCTACCGAAAACAGGTAGAAACTAT
ACTATAA

Upstream 100 bases:

>100_bases
TGCTCTATTTTGGAGACCGCTATGCCATTACTATAGAGTCTGCAGAGCAAGCCGGTGTTCAGTATCGTATTACAATTCAA
GATGAGTAGAAAGGGAGAAA

Downstream 100 bases:

>100_bases
GATTTGTATTCCTTTACAAAAGGTGCTATAATATTATCAGGAGGTTCTATCATGAAAAAGAAACCAATTTATCTATGGGT
CTTGCTAATCTTGTCTGCCC

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MYKVLLVDDEYMVTEGLKRLIPFDKWDMEVVATASHADEALEYVQENPVDVIISDVNMPDKTGLDMIREMKEILPDAAYI
LLSGYQEFDYVKRAMNLSVVDYLVKPVDKVELGNLLEKIAGQLGERGKKSQTLSQELDEAGFVSYLGDKENWWIGLSKEK
QGSFTIPYYVLGQAWQIFISDQPLDGLVVTPFEAPYQEHFERWKLNAEKTLFYGSVNLQQSESLFAYYEPIYRVIIQGNL
NQIVEELNLLEKVVLENTPRIPITKQLFIQFVMDVFHLFEHLKADDMTDIVKTIHAIQSFDELVSYIKETLISFFGQYRM
NENVVSVLEVIGRDYQKELSLKDISKALFINPVYLGQLIKRETDSTFAELLNKQRIKAAQQLLLSTSDSIEDICYAVGYS
NLGYFYKVFRKLCGKSPKAYRKQVETIL

Sequences:

>Translated_428_residues
MYKVLLVDDEYMVTEGLKRLIPFDKWDMEVVATASHADEALEYVQENPVDVIISDVNMPDKTGLDMIREMKEILPDAAYI
LLSGYQEFDYVKRAMNLSVVDYLVKPVDKVELGNLLEKIAGQLGERGKKSQTLSQELDEAGFVSYLGDKENWWIGLSKEK
QGSFTIPYYVLGQAWQIFISDQPLDGLVVTPFEAPYQEHFERWKLNAEKTLFYGSVNLQQSESLFAYYEPIYRVIIQGNL
NQIVEELNLLEKVVLENTPRIPITKQLFIQFVMDVFHLFEHLKADDMTDIVKTIHAIQSFDELVSYIKETLISFFGQYRM
NENVVSVLEVIGRDYQKELSLKDISKALFINPVYLGQLIKRETDSTFAELLNKQRIKAAQQLLLSTSDSIEDICYAVGYS
NLGYFYKVFRKLCGKSPKAYRKQVETIL
>Mature_428_residues
MYKVLLVDDEYMVTEGLKRLIPFDKWDMEVVATASHADEALEYVQENPVDVIISDVNMPDKTGLDMIREMKEILPDAAYI
LLSGYQEFDYVKRAMNLSVVDYLVKPVDKVELGNLLEKIAGQLGERGKKSQTLSQELDEAGFVSYLGDKENWWIGLSKEK
QGSFTIPYYVLGQAWQIFISDQPLDGLVVTPFEAPYQEHFERWKLNAEKTLFYGSVNLQQSESLFAYYEPIYRVIIQGNL
NQIVEELNLLEKVVLENTPRIPITKQLFIQFVMDVFHLFEHLKADDMTDIVKTIHAIQSFDELVSYIKETLISFFGQYRM
NENVVSVLEVIGRDYQKELSLKDISKALFINPVYLGQLIKRETDSTFAELLNKQRIKAAQQLLLSTSDSIEDICYAVGYS
NLGYFYKVFRKLCGKSPKAYRKQVETIL

Specific function: Member of the two-component regulatory system yesM/yesN [H]

COG id: COG4753

COG function: function code T; Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018060
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00165 HTH_AraC; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 49381; Mature: 49381

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKVLLVDDEYMVTEGLKRLIPFDKWDMEVVATASHADEALEYVQENPVDVIISDVNMPD
CEEEEEECCHHHHHHHHHHHCCCCCCCHHHEEEHHHHHHHHHHHHCCCCEEEEECCCCCC
KTGLDMIREMKEILPDAAYILLSGYQEFDYVKRAMNLSVVDYLVKPVDKVELGNLLEKIA
CCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GQLGERGKKSQTLSQELDEAGFVSYLGDKENWWIGLSKEKQGSFTIPYYVLGQAWQIFIS
HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEECHHHHHCCCCEEEEC
DQPLDGLVVTPFEAPYQEHFERWKLNAEKTLFYGSVNLQQSESLFAYYEPIYRVIIQGNL
CCCCCCEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCH
NQIVEELNLLEKVVLENTPRIPITKQLFIQFVMDVFHLFEHLKADDMTDIVKTIHAIQSF
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
DELVSYIKETLISFFGQYRMNENVVSVLEVIGRDYQKELSLKDISKALFINPVYLGQLIK
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHHCCHHHHHHHHH
RETDSTFAELLNKQRIKAAQQLLLSTSDSIEDICYAVGYSNLGYFYKVFRKLCGKSPKAY
HCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHH
RKQVETIL
HHHHHHCC
>Mature Secondary Structure
MYKVLLVDDEYMVTEGLKRLIPFDKWDMEVVATASHADEALEYVQENPVDVIISDVNMPD
CEEEEEECCHHHHHHHHHHHCCCCCCCHHHEEEHHHHHHHHHHHHCCCCEEEEECCCCCC
KTGLDMIREMKEILPDAAYILLSGYQEFDYVKRAMNLSVVDYLVKPVDKVELGNLLEKIA
CCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GQLGERGKKSQTLSQELDEAGFVSYLGDKENWWIGLSKEKQGSFTIPYYVLGQAWQIFIS
HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEECHHHHHCCCCEEEEC
DQPLDGLVVTPFEAPYQEHFERWKLNAEKTLFYGSVNLQQSESLFAYYEPIYRVIIQGNL
CCCCCCEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCH
NQIVEELNLLEKVVLENTPRIPITKQLFIQFVMDVFHLFEHLKADDMTDIVKTIHAIQSF
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
DELVSYIKETLISFFGQYRMNENVVSVLEVIGRDYQKELSLKDISKALFINPVYLGQLIK
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHHCCHHHHHHHHH
RETDSTFAELLNKQRIKAAQQLLLSTSDSIEDICYAVGYSNLGYFYKVFRKLCGKSPKAY
HCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHH
RKQVETIL
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]