| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116516646
Identifier: 116516646
GI number: 116516646
Start: 1916760
End: 1917401
Strand: Reverse
Name: 116516646
Synonym: SPD_1944
Alternate gene names: NA
Gene position: 1917401-1916760 (Counterclockwise)
Preceding gene: 116515612
Following gene: 116515350
Centisome position: 93.71
GC content: 39.72
Gene sequence:
>642_bases ATGAAATTACTTAAAAACCTTGGCTGGATTCTTCTAGCCCTTCTATCCTTTTTATTTATCTATGGCTTTATTCAGGGGCT CGCGACTGCGTCGCTTGCTTTAGGCGCTTCACCCTATGCTGTTACTCTACTCTATGTGGCCTTGGCTGGAGTATATGTGT ACGGCATTTACAAATGGTATCAGAAAGCTCCTGTTTATATTGAGAAGAGCGGCTTTAACCGATTTATTTGGCTTCCTGCC TTGGTTTGGTTCTTATCTCTGGTCGTTCAATTCTTCTTGCCAGATGATCCTTCAGTAAATCAGCAAATAGCGACAGACTT GACCTTGTCTCAACCACTTTTCTCATTCTTTGCTGTGGTTATTTTTGCTCCTTTGACGGAAGAGATTGTTTTTAGAGGGA TGTTAGCACGCTATCTCTTTCCTAAGCAGGACAATAGTAAACGAACCCTGATTTTTCTTCTGGTATCTAGTCTTCTATTT GCCTTGATTCATTTTCCAGGTGATGTGCAACAATTTTTTGTCTATTTTAGCCTTGGTTTTAGTTTGGGTTTGGCTTACAT TAGCAGAAAAGGTCTGGTCTACAGTATTTCTCTTCACGCTTTGAATAATTTAGTCGGCTTTTTGATGATTCTCATGCTAT AA
Upstream 100 bases:
>100_bases TTCAGTTACTAGCTTTCTTGCTTGTAGGAGCCATCCATGTTTATATCAATGTGATGCAGTTACCTATGGTAAAACGTTAT TTCAAATAAAGGAGTTATCT
Downstream 100 bases:
>100_bases TAGAGTCAGGAGGTCACATGAAACGAGTAATTTTATTAGCAGTGATTCAGGCAGTCGTTCTATTTTTCATCATTGGAGCG CTAGCTTATGCCTTCAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Membrane Protease; CAAX Amino Protease
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKLLKNLGWILLALLSFLFIYGFIQGLATASLALGASPYAVTLLYVALAGVYVYGIYKWYQKAPVYIEKSGFNRFIWLPA LVWFLSLVVQFFLPDDPSVNQQIATDLTLSQPLFSFFAVVIFAPLTEEIVFRGMLARYLFPKQDNSKRTLIFLLVSSLLF ALIHFPGDVQQFFVYFSLGFSLGLAYISRKGLVYSISLHALNNLVGFLMILML
Sequences:
>Translated_213_residues MKLLKNLGWILLALLSFLFIYGFIQGLATASLALGASPYAVTLLYVALAGVYVYGIYKWYQKAPVYIEKSGFNRFIWLPA LVWFLSLVVQFFLPDDPSVNQQIATDLTLSQPLFSFFAVVIFAPLTEEIVFRGMLARYLFPKQDNSKRTLIFLLVSSLLF ALIHFPGDVQQFFVYFSLGFSLGLAYISRKGLVYSISLHALNNLVGFLMILML >Mature_213_residues MKLLKNLGWILLALLSFLFIYGFIQGLATASLALGASPYAVTLLYVALAGVYVYGIYKWYQKAPVYIEKSGFNRFIWLPA LVWFLSLVVQFFLPDDPSVNQQIATDLTLSQPLFSFFAVVIFAPLTEEIVFRGMLARYLFPKQDNSKRTLIFLLVSSLLF ALIHFPGDVQQFFVYFSLGFSLGLAYISRKGLVYSISLHALNNLVGFLMILML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24098; Mature: 24098
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLKNLGWILLALLSFLFIYGFIQGLATASLALGASPYAVTLLYVALAGVYVYGIYKWY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH QKAPVYIEKSGFNRFIWLPALVWFLSLVVQFFLPDDPSVNQQIATDLTLSQPLFSFFAVV HCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH IFAPLTEEIVFRGMLARYLFPKQDNSKRTLIFLLVSSLLFALIHFPGDVQQFFVYFSLGF HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH SLGLAYISRKGLVYSISLHALNNLVGFLMILML HHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MKLLKNLGWILLALLSFLFIYGFIQGLATASLALGASPYAVTLLYVALAGVYVYGIYKWY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH QKAPVYIEKSGFNRFIWLPALVWFLSLVVQFFLPDDPSVNQQIATDLTLSQPLFSFFAVV HCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH IFAPLTEEIVFRGMLARYLFPKQDNSKRTLIFLLVSSLLFALIHFPGDVQQFFVYFSLGF HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH SLGLAYISRKGLVYSISLHALNNLVGFLMILML HHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA