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The map label for this gene is 116516634

Identifier: 116516634

GI number: 116516634

Start: 1853365

End: 1853985

Strand: Reverse

Name: 116516634

Synonym: SPD_1875

Alternate gene names: NA

Gene position: 1853985-1853365 (Counterclockwise)

Preceding gene: 116515917

Following gene: 116515770

Centisome position: 90.61

GC content: 42.03

Gene sequence:

>621_bases
ATGCAAAAAACAGCTTTTATTTGGGATTTAGACGGGACTTTATTGGACTCTTACGAAGCGATTTTATCAGGGATTGAGGA
GACTTTTGCTCAGTTTTCTATTCCTTATGATAAGGAGAAGGTGAGAGAGTTTATCTTCAAGTATTCGGTGCAAGATTTGC
TTGTGCGGGTGGCAGAAGATAGAAATCTGGATGTTGAGGTGCTAAATCAGGTGCGTGCCCAGAGTCTGGCTGAGAAGAAT
GCTCAGGTAGTTTTGATGCCAGGTGCGCGTGAGGTGCTAGCTTGGGCAGACGAATCAGGAATTCAGCAGTTTATATATAC
TCATAAGGGGAACAACGCTTTTACCATTCTCAAGGACTTGGGGGTGGAATCCTATTTTACAGAGATTTTAACCAGTCAGA
GTGGCTTTGTGCGGAAGCCAAGTCCAGAAGCGGCTACCTATCTGCTAGATAAGTATCAGTTGAATTCTGATAATACTTAT
TATATAGGGGATCGGACTCTGGATGTGGAATTTGCCCAGAATAGTGGGATTCAAAGTATCAACTTTTTAGAGTCTACTTA
TGAAGGGAATCACAGGATTCAAGCGTTAGCAGATATTTCCCGTATTTTTGAGACTAAGTGA

Upstream 100 bases:

>100_bases
CTTGCCTGGTATTTGGGCAGGGTCTCTCTTGGATAATGGTTTTCGCTGGTTATTTCTACGCTATCGTTACCAGCGCTATA
TGAACTTGAAAGGATAGGAA

Downstream 100 bases:

>100_bases
TAAAAAGATTGTGTCAGTTTTGTGACAGAGACCTAACAAACTATTTCAAGTAACCTAGTTTGTTACAAGGAATAGACAGT
TCTGTTAAATAGGCCCGAGA

Product: hydrolase, haloacid dehalogenase-like family protein

Products: NA

Alternate protein names: PGP; PGPase [H]

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MQKTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNLDVEVLNQVRAQSLAEKN
AQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTY
YIGDRTLDVEFAQNSGIQSINFLESTYEGNHRIQALADISRIFETK

Sequences:

>Translated_206_residues
MQKTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNLDVEVLNQVRAQSLAEKN
AQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTY
YIGDRTLDVEFAQNSGIQSINFLESTYEGNHRIQALADISRIFETK
>Mature_206_residues
MQKTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNLDVEVLNQVRAQSLAEKN
AQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTY
YIGDRTLDVEFAQNSGIQSINFLESTYEGNHRIQALADISRIFETK

Specific function: Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stres

COG id: COG0546

COG function: function code R; Predicted phosphatases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833
- InterPro:   IPR006346
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =3.1.3.18 [H]

Molecular weight: Translated: 23491; Mature: 23491

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAED
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
RNLDVEVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFTILKDL
CCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCHHHHHHHHHEECCCCEEEHHHHC
GVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSI
CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHEEECCCCEEEECCEEEEEEECCCCCCCHH
NFLESTYEGNHRIQALADISRIFETK
HHHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQKTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAED
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
RNLDVEVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFTILKDL
CCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCHHHHHHHHHEECCCCEEEHHHHC
GVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSI
CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHEEECCCCEEEECCEEEEEEECCCCCCCHH
NFLESTYEGNHRIQALADISRIFETK
HHHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA