| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116516508
Identifier: 116516508
GI number: 116516508
Start: 378158
End: 378706
Strand: Direct
Name: 116516508
Synonym: SPD_0373
Alternate gene names: NA
Gene position: 378158-378706 (Clockwise)
Preceding gene: 116515323
Following gene: 116516614
Centisome position: 18.48
GC content: 43.53
Gene sequence:
>549_bases ATGACAACATTTACTATCCATACAGTAGAGTCAGCACCAGCAGAAGTGAAAGAAATTCTTGAAACAGTAGAAAAAGACAA CAATGGCTATATTCCCAACCTAATCGGTCTCTTGGCCAATGCCCCGACTGTTTTAGAAGCCTACCAAATTGTCTCATCTA TCCACCGTCGCAACAGCCTGACACCCGTTGAGCGTGAAGTGGTGCAAATCACGGCAGCCGTGACCAATGGTTGTGCCTTC TGTGTCGCAGGTCACACAGCCTTTTCCATCAAACAAATCCAGATGAATGATGACTTGATTCAAGCTCTTCGCAATCGTAC TCCAATTGAAACAGATCCTAAATTGGATACCCTAGCTAAGTTTACCTTGGCAGTTATCAATACCAAGGGTCGTGTAGGAG ATGAAGCCTTGTCTGAGTTTTTAGAAGCTGGCTACACTCAACAAAATGCCTTGGATGTGGTTTTTGGTGTCAGCCTAGCA ATCCTCTGTAACTATGCCAACAACTTAGCTAATACACCAATTAATCCAGAATTGCAACCTTATGCCTAA
Upstream 100 bases:
>100_bases TTATGAGAGAATAAAGCTTTATCTTAGATAAACTTAGGAATCAGGATTTTATAAGATTTTCCAATAATATTAGTGTCAAT AATAAGAAAAGAGGTATCTT
Downstream 100 bases:
>100_bases TTCATATCTGAGTAAAATGAAGTCTGAAATAAGCGGACTTCGTTTTTTTAAATCCTCATTTAAGCGCTTTTATGTTATAC TGAAACTAATATGATTATTG
Product: hypothetical protein
Products: NA
Alternate protein names: Carboxymuconolactone Decarboxylase; Alkylhydroperoxidase Like Protein AhpD Family; Alkylhydroperoxidase AhpD Core; Peroxidase-Related; Alkylhydroperoxidase AhpD Family Core Domain Protein; Alkylhydroperoxidase AhpD Domain Protein; Macrophage Infectivity Potentiator-Related Protein; 24 KDa Macrophage-Induced Protein; 4-Carboxymuconolactone Decarboxylase; Macrophage Infectivity Potentiator Protein; Alkylhydroperoxidase-Like Protein; Ypothetical Protein SMU.; AhpD-Like Alkylhydroperoxidase; Antioxydant Protein; Peroxidase; Alkylhydroperoxidase AhpD Family Protein; Alkylhydroperoxidase-Like Protein AhpD Family; AhpD Family Alkylhydroperoxidase; Alkylhydroperoxidase AhpD Family Core Domain Protein MED
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MTTFTIHTVESAPAEVKEILETVEKDNNGYIPNLIGLLANAPTVLEAYQIVSSIHRRNSLTPVEREVVQITAAVTNGCAF CVAGHTAFSIKQIQMNDDLIQALRNRTPIETDPKLDTLAKFTLAVINTKGRVGDEALSEFLEAGYTQQNALDVVFGVSLA ILCNYANNLANTPINPELQPYA
Sequences:
>Translated_182_residues MTTFTIHTVESAPAEVKEILETVEKDNNGYIPNLIGLLANAPTVLEAYQIVSSIHRRNSLTPVEREVVQITAAVTNGCAF CVAGHTAFSIKQIQMNDDLIQALRNRTPIETDPKLDTLAKFTLAVINTKGRVGDEALSEFLEAGYTQQNALDVVFGVSLA ILCNYANNLANTPINPELQPYA >Mature_181_residues TTFTIHTVESAPAEVKEILETVEKDNNGYIPNLIGLLANAPTVLEAYQIVSSIHRRNSLTPVEREVVQITAAVTNGCAFC VAGHTAFSIKQIQMNDDLIQALRNRTPIETDPKLDTLAKFTLAVINTKGRVGDEALSEFLEAGYTQQNALDVVFGVSLAI LCNYANNLANTPINPELQPYA
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19816; Mature: 19685
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFTIHTVESAPAEVKEILETVEKDNNGYIPNLIGLLANAPTVLEAYQIVSSIHRRNSL CCEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCC TPVEREVVQITAAVTNGCAFCVAGHTAFSIKQIQMNDDLIQALRNRTPIETDPKLDTLAK CHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEECCHHHHHHHHCCCCCCCCCCHHHHHH FTLAVINTKGRVGDEALSEFLEAGYTQQNALDVVFGVSLAILCNYANNLANTPINPELQP HHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC YA CC >Mature Secondary Structure TTFTIHTVESAPAEVKEILETVEKDNNGYIPNLIGLLANAPTVLEAYQIVSSIHRRNSL CEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCC TPVEREVVQITAAVTNGCAFCVAGHTAFSIKQIQMNDDLIQALRNRTPIETDPKLDTLAK CHHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEECCHHHHHHHHCCCCCCCCCCHHHHHH FTLAVINTKGRVGDEALSEFLEAGYTQQNALDVVFGVSLAILCNYANNLANTPINPELQP HHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC YA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA