| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116516428
Identifier: 116516428
GI number: 116516428
Start: 1314206
End: 1314652
Strand: Direct
Name: 116516428
Synonym: SPD_1294
Alternate gene names: NA
Gene position: 1314206-1314652 (Clockwise)
Preceding gene: 116516815
Following gene: 116515763
Centisome position: 64.23
GC content: 40.72
Gene sequence:
>447_bases ATGAAAACTACCTTTTCCTACCCAAAATGGGCAGAAATTCCAAACATTGACCTCTATCTGGACCAGGTTTTGCTCTATGT CAATCAGGTCTGCGCCCCTATCTCTCCTAATAAAGACAAGGGCCTAACAGCATCTATGGTCAACAATTATGTGAAAAATG GTTACCTGACAAAGCCTGACAAAAAAAAATACCAACGCCAACAGATTGCCCGTTTGATTGCTATCACAACCCTCAAGTCT GTATTTTCTATTCAAGAAATAGCCCAGACACTTAATACTCTACAAACTCAAGCAAGTTCAGACCAACTCTACGATGCTTT TGTGGACTACATGAACCAAGGAATTGACCCAGCTAACCCTATTATCCAAACCAGCTGCCAAACCGTCAAACTCTATCATC AAACTCTAGACTTAATCGATCATACTCAAGAGGAGGTAATCCAATGA
Upstream 100 bases:
>100_bases ATAGCATAATTTAAGTATTTCTACAAGCAGTTAAAACTTGACTTTGTGTTTTTGTTATTTTATAATCTAGTTATCAAAAC TATATAAAAAGGAGTTGAAA
Downstream 100 bases:
>100_bases ACACTAGTCTTAAACTCAGCAAACAACTCAGTTTTGGAGAGGAGATTGCTAATAGCGTGACCCATGCTGTGGGTGCAGTC ATCATGCTTATCTTGCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKTTFSYPKWAEIPNIDLYLDQVLLYVNQVCAPISPNKDKGLTASMVNNYVKNGYLTKPDKKKYQRQQIARLIAITTLKS VFSIQEIAQTLNTLQTQASSDQLYDAFVDYMNQGIDPANPIIQTSCQTVKLYHQTLDLIDHTQEEVIQ
Sequences:
>Translated_148_residues MKTTFSYPKWAEIPNIDLYLDQVLLYVNQVCAPISPNKDKGLTASMVNNYVKNGYLTKPDKKKYQRQQIARLIAITTLKS VFSIQEIAQTLNTLQTQASSDQLYDAFVDYMNQGIDPANPIIQTSCQTVKLYHQTLDLIDHTQEEVIQ >Mature_148_residues MKTTFSYPKWAEIPNIDLYLDQVLLYVNQVCAPISPNKDKGLTASMVNNYVKNGYLTKPDKKKYQRQQIARLIAITTLKS VFSIQEIAQTLNTLQTQASSDQLYDAFVDYMNQGIDPANPIIQTSCQTVKLYHQTLDLIDHTQEEVIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16905; Mature: 16905
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTFSYPKWAEIPNIDLYLDQVLLYVNQVCAPISPNKDKGLTASMVNNYVKNGYLTKPD CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCH KKKYQRQQIARLIAITTLKSVFSIQEIAQTLNTLQTQASSDQLYDAFVDYMNQGIDPANP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCH IIQTSCQTVKLYHQTLDLIDHTQEEVIQ HHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKTTFSYPKWAEIPNIDLYLDQVLLYVNQVCAPISPNKDKGLTASMVNNYVKNGYLTKPD CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCH KKKYQRQQIARLIAITTLKSVFSIQEIAQTLNTLQTQASSDQLYDAFVDYMNQGIDPANP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCH IIQTSCQTVKLYHQTLDLIDHTQEEVIQ HHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA