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The map label for this gene is ribU [H]

Identifier: 116516407

GI number: 116516407

Start: 441374

End: 441937

Strand: Direct

Name: ribU [H]

Synonym: SPD_0437

Alternate gene names: 116516407

Gene position: 441374-441937 (Clockwise)

Preceding gene: 116515392

Following gene: 116517046

Centisome position: 21.57

GC content: 40.6

Gene sequence:

>564_bases
ATGACAAACACACGTCGACTTTCGACCATTGCAATTCTATCAGCCATCTCATTTGTGCTGATGTACTTTGACTTTCCGCT
TTTACCAGCGGCATCTTTCCTCAAGATCGAATTTAGTATCTTGCCAGTCCTTGTGGGTCTGGTGGTCATGGATTTGCCTG
CTGCTCTAGGAGTGCTCTTGCTTCGCTCACTATTGAAATTGCTTCTTAACAGCCAAGGAGTGAATACTTACATTGGTTTG
CCGATGAATATCGTAGCTTTGGGAGTTTTTGTCATCGTATTTGCTTTGATTTGGAAAAAGGAACGGACAACCCTTCGTTT
CCTACTAGGCTCTCTAGCTGGAACTGTTGGTTTAACCTTGGCCATGTTGGTTCTCAACTATGTTTATGCTGTTCCTTTGT
ACGCTAAGTTTGCTAACTTTGATATTGGAAAAATTTTGGGACTTTCCAACTACCTAATGACCATGGTATTACCTTTTAAC
TTGATTGAGGGTGTAATCTTTTCCGTTTCATTCTGGTTGTTGTACGTCCTTTTGAAACCAACCTTAAAACACTATGAAAG
ATAA

Upstream 100 bases:

>100_bases
AATAGAGTAGGAGGGAACTTTTGGGATATAAAAAGTGAGAATAGATAGAGGAATCCTTTCCAACTTCTTCTGATTTTATA
GAAAATTGGAGGAACCTGTT

Downstream 100 bases:

>100_bases
ACAAACATTTTTAATGAAGGGCAGTTTTGCCCTTTTACTTTTCGTTATTCTTGGCTACATGGTCAAATTTTACCCTGAAA
CGCTGGTCAATTTTGACCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MTNTRRLSTIAILSAISFVLMYFDFPLLPAASFLKIEFSILPVLVGLVVMDLPAALGVLLLRSLLKLLLNSQGVNTYIGL
PMNIVALGVFVIVFALIWKKERTTLRFLLGSLAGTVGLTLAMLVLNYVYAVPLYAKFANFDIGKILGLSNYLMTMVLPFN
LIEGVIFSVSFWLLYVLLKPTLKHYER

Sequences:

>Translated_187_residues
MTNTRRLSTIAILSAISFVLMYFDFPLLPAASFLKIEFSILPVLVGLVVMDLPAALGVLLLRSLLKLLLNSQGVNTYIGL
PMNIVALGVFVIVFALIWKKERTTLRFLLGSLAGTVGLTLAMLVLNYVYAVPLYAKFANFDIGKILGLSNYLMTMVLPFN
LIEGVIFSVSFWLLYVLLKPTLKHYER
>Mature_186_residues
TNTRRLSTIAILSAISFVLMYFDFPLLPAASFLKIEFSILPVLVGLVVMDLPAALGVLLLRSLLKLLLNSQGVNTYIGLP
MNIVALGVFVIVFALIWKKERTTLRFLLGSLAGTVGLTLAMLVLNYVYAVPLYAKFANFDIGKILGLSNYLMTMVLPFNL
IEGVIFSVSFWLLYVLLKPTLKHYER

Specific function: Mediates riboflavin uptake, probably via a facilitated diffusion mechanism. May also transport FMN and roseoflavin [H]

COG id: COG3601

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic riboflavin transporter (P- RFT) (TC 2.A.87) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20822; Mature: 20691

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS00062 ALDOKETO_REDUCTASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTRRLSTIAILSAISFVLMYFDFPLLPAASFLKIEFSILPVLVGLVVMDLPAALGVLL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRSLLKLLLNSQGVNTYIGLPMNIVALGVFVIVFALIWKKERTTLRFLLGSLAGTVGLTL
HHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLVLNYVYAVPLYAKFANFDIGKILGLSNYLMTMVLPFNLIEGVIFSVSFWLLYVLLKP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLKHYER
HHHHCCC
>Mature Secondary Structure 
TNTRRLSTIAILSAISFVLMYFDFPLLPAASFLKIEFSILPVLVGLVVMDLPAALGVLL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRSLLKLLLNSQGVNTYIGLPMNIVALGVFVIVFALIWKKERTTLRFLLGSLAGTVGLTL
HHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLVLNYVYAVPLYAKFANFDIGKILGLSNYLMTMVLPFNLIEGVIFSVSFWLLYVLLKP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLKHYER
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA