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The map label for this gene is yvdE [H]

Identifier: 116516367

GI number: 116516367

Start: 1868182

End: 1868910

Strand: Reverse

Name: yvdE [H]

Synonym: SPD_1899

Alternate gene names: 116516367

Gene position: 1868910-1868182 (Counterclockwise)

Preceding gene: 116515530

Following gene: 116516772

Centisome position: 91.34

GC content: 42.39

Gene sequence:

>729_bases
ATGATAGGACTATCGTTAGCATTCGAAAGGAGAGGCATCATGGCTAGAACGGTTGTAGGAGTTGCTGCAAATCTATGTCC
CGTAGACGCAGAAGGCAAAATCATTCATTCATCTGTATCTTGTAGATTCGCAGAGATCATTCGTCAAGTCGGTGGTCTCC
CTTTAGTCATTCCTGTTGGTGATGAGTCAGTTGTACGTGATTATGTGGAAATGATTGACAAACTCATTTTGACAGGAGGC
CAAAATGTTCATCCTCAGTTTTATGGAGAGAAAAAGACCGTCGAGAGCGATGATTACAATCTGGTCCGTGACGAATTTGA
ATTGGCACTCTTGAAGGAAGCGCTTCGTCAGAATAAACCAATTATGGCAATCTGTCGCGGTGTCCAACTTGTCAATGTTG
CCTTTGGTGGAACCCTCAATCAAGAAATCGAAGGTCACTGGCAAGGACTACCTTTCGGGACATCTCACTCTATTGAGACA
GTAGAAGGAAGCGTGGTGGCTAAGCTATTTGGGAAAGAAAGTCAGGTCAACTCAGTCCATCGTCAAAGCATTAAAGATTT
GGCACCTAATTTCCGTGTAACTGCTATTGATTCAAGAGACCAAACTATTGAAGCGATTGAGTCTATCGACGAGCACCGCA
TTATCGGTTTACAGTGGCATCCAGAGTTTCTGGTTAATGAAGAAGATGGCAATTTAGAATTATTTGAGTATTTATTGAAT
GAACTGTAA

Upstream 100 bases:

>100_bases
AGAAAGAAGTTGTCCTATGTGGGCAGCTTTTTCTTGTCCATAAAAAATGTTTATCACAGCCTTAAAAAAAACATATTAGA
CGAAAGTCATTTTGAGTGAT

Downstream 100 bases:

>100_bases
CGATTGGAACATCTGGTCGTTCTTTCTTTTATTTTTTCAAAATTTTTAGAATGTGGCATTTTACGCAAACGTTTGAATTC
TGATAAAAATTGGAGAAATT

Product: glutamine amidotransferase, class 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MIGLSLAFERRGIMARTVVGVAANLCPVDAEGKIIHSSVSCRFAEIIRQVGGLPLVIPVGDESVVRDYVEMIDKLILTGG
QNVHPQFYGEKKTVESDDYNLVRDEFELALLKEALRQNKPIMAICRGVQLVNVAFGGTLNQEIEGHWQGLPFGTSHSIET
VEGSVVAKLFGKESQVNSVHRQSIKDLAPNFRVTAIDSRDQTIEAIESIDEHRIIGLQWHPEFLVNEEDGNLELFEYLLN
EL

Sequences:

>Translated_242_residues
MIGLSLAFERRGIMARTVVGVAANLCPVDAEGKIIHSSVSCRFAEIIRQVGGLPLVIPVGDESVVRDYVEMIDKLILTGG
QNVHPQFYGEKKTVESDDYNLVRDEFELALLKEALRQNKPIMAICRGVQLVNVAFGGTLNQEIEGHWQGLPFGTSHSIET
VEGSVVAKLFGKESQVNSVHRQSIKDLAPNFRVTAIDSRDQTIEAIESIDEHRIIGLQWHPEFLVNEEDGNLELFEYLLN
EL
>Mature_242_residues
MIGLSLAFERRGIMARTVVGVAANLCPVDAEGKIIHSSVSCRFAEIIRQVGGLPLVIPVGDESVVRDYVEMIDKLILTGG
QNVHPQFYGEKKTVESDDYNLVRDEFELALLKEALRQNKPIMAICRGVQLVNVAFGGTLNQEIEGHWQGLPFGTSHSIET
VEGSVVAKLFGKESQVNSVHRQSIKDLAPNFRVTAIDSRDQTIEAIESIDEHRIIGLQWHPEFLVNEEDGNLELFEYLLN
EL

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=241, Percent_Identity=31.9502074688797, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 26937; Mature: 26937

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGLSLAFERRGIMARTVVGVAANLCPVDAEGKIIHSSVSCRFAEIIRQVGGLPLVIPVG
CCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHCCCEEEEECC
DESVVRDYVEMIDKLILTGGQNVHPQFYGEKKTVESDDYNLVRDEFELALLKEALRQNKP
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
IMAICRGVQLVNVAFGGTLNQEIEGHWQGLPFGTSHSIETVEGSVVAKLFGKESQVNSVH
HHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH
RQSIKDLAPNFRVTAIDSRDQTIEAIESIDEHRIIGLQWHPEFLVNEEDGNLELFEYLLN
HHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCEEEEEEECCCEEEECCCCCHHHHHHHHH
EL
HC
>Mature Secondary Structure
MIGLSLAFERRGIMARTVVGVAANLCPVDAEGKIIHSSVSCRFAEIIRQVGGLPLVIPVG
CCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHCCCEEEEECC
DESVVRDYVEMIDKLILTGGQNVHPQFYGEKKTVESDDYNLVRDEFELALLKEALRQNKP
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
IMAICRGVQLVNVAFGGTLNQEIEGHWQGLPFGTSHSIETVEGSVVAKLFGKESQVNSVH
HHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH
RQSIKDLAPNFRVTAIDSRDQTIEAIESIDEHRIIGLQWHPEFLVNEEDGNLELFEYLLN
HHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCEEEEEEECCCEEEECCCCCHHHHHHHHH
EL
HC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]