Click here to switch to the map view.

The map label for this gene is 116516320

Identifier: 116516320

GI number: 116516320

Start: 1787249

End: 1787542

Strand: Reverse

Name: 116516320

Synonym: SPD_1792

Alternate gene names: NA

Gene position: 1787542-1787249 (Counterclockwise)

Preceding gene: 116516548

Following gene: 116516203

Centisome position: 87.36

GC content: 33.67

Gene sequence:

>294_bases
ATGATGAAAAACTCTTTTCAAAAATCAAATTTCCTTTATTATGGAATTATCCTAGTTTCAGTCTTGGTAGAAGTGATCAT
GATCTGTCAATTAGAGAGTCTGGTACCGCTTCTTTATCCAAGTTTTATTGGATTTTTAGTTTTTCATGTACTCTACCATC
TAATCTTATTTCTAGTTGCAAAACGAAGTGGGCGTTGGGATTACTTGATGATATGGGGGCTTTTCCTCATGTTTAATCTT
CTTTATGACTCCTTTCTAGGCTTGCTTTTTCTAGGTTTATCTTTTGGTATGTGA

Upstream 100 bases:

>100_bases
AAAAAAAGTATTTTTCAAAAGAATATTAGGGCTTAAACTCTATATAAATATATGATAAAATAAAAGAAAGGATAGCAGGA
AAGAAGTGAAGGAAGGGAGA

Downstream 100 bases:

>100_bases
TGTGTCTTTGCAAAATACCTGCTATCTCTACGTTCTTAACCTCGCCTTTAGCAAGGTTTTTCTTCTATACGAAACTAGTA
ACACATTTCAGTAAACTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MMKNSFQKSNFLYYGIILVSVLVEVIMICQLESLVPLLYPSFIGFLVFHVLYHLILFLVAKRSGRWDYLMIWGLFLMFNL
LYDSFLGLLFLGLSFGM

Sequences:

>Translated_97_residues
MMKNSFQKSNFLYYGIILVSVLVEVIMICQLESLVPLLYPSFIGFLVFHVLYHLILFLVAKRSGRWDYLMIWGLFLMFNL
LYDSFLGLLFLGLSFGM
>Mature_97_residues
MMKNSFQKSNFLYYGIILVSVLVEVIMICQLESLVPLLYPSFIGFLVFHVLYHLILFLVAKRSGRWDYLMIWGLFLMFNL
LYDSFLGLLFLGLSFGM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11373; Mature: 11373

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKNSFQKSNFLYYGIILVSVLVEVIMICQLESLVPLLYPSFIGFLVFHVLYHLILFLVA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRSGRWDYLMIWGLFLMFNLLYDSFLGLLFLGLSFGM
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMKNSFQKSNFLYYGIILVSVLVEVIMICQLESLVPLLYPSFIGFLVFHVLYHLILFLVA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRSGRWDYLMIWGLFLMFNLLYDSFLGLLFLGLSFGM
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA