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The map label for this gene is 116516300

Identifier: 116516300

GI number: 116516300

Start: 1604320

End: 1605801

Strand: Reverse

Name: 116516300

Synonym: SPD_1587

Alternate gene names: NA

Gene position: 1605801-1604320 (Counterclockwise)

Preceding gene: 116516977

Following gene: 116515545

Centisome position: 78.48

GC content: 30.03

Gene sequence:

>1482_bases
ATGAGAGATTTATTATCTAAAAAAAGTCATAGGCAATTAGAATTATTAGAATTATTATTTGAACATAAACGTTGGTTTCA
TCGTTCTGAACTAGCAGAGTTATTAAATTGTACAGAACGTGCAGTCAAAGATGATCTATCCCATGTTAAATCTGCTTTTC
CTGACTTGATTTTTCATTCTTCTACTAATGGTATACGCATTATTAATACCGATGATAGTGATATTGAAATGGTTTACCAT
CATTTCTTTAAACATTCAACTCATTTTTCGATTTTAGAATTCATCTTCTTTAATGAAGGTTGTCAAGCTGAGAGTATTTG
TAAAGAATTTTATATCAGTTCATCTTCGCTCTATCGTATTATTAGCCAAATCAATAAAGTGATTAAAAGGCAATTTCAAT
TTGAAGTCAGTCTGACCCCTGTTCAAATCATTGGAAACGAGAGAGACATTCGTTACTTTTTTGCACAATATTTTTCAGAA
AAATATTATTTCCTAGAATGGCCGTTTGAAAATTTTTCATCAGAGCCACTATCTCAATTGTTAGAATTGGTTTATAAGGA
AACAAGCTTTCCAATGAATTTGTCAACGCATAGAATGCTAAAGTTGCTCCTAGTTACGAACCTATATAGAATAAAGTTTG
GTCATTTTATGGAAGTAGATAAAGATTCTTTTAACGACCAAAGTTTGGATTTTTTAATGCAGGCAGAAGGAATAGAAGGT
GTTGCTCAGAGTTTTGAATCAGAATACAATATCTCTTTAGATGAAGAAGTTGTTTGCCAATTATTTGTGTCTTACTTTCA
AAAAATGTTTTTCATAGATGAAAGTCTCTTTATGAAATGCGTAAAAAAGGATAGTTATGTTGAAAAATCTTACCATCTAT
TGAGTGATTTTATTGATCAGATTTCAGTCAAGTATCAGATTGAAATTGAGAATAAGGATAATCTGATTTGGCATCTGCAT
AATACCGCACATCTGTATCGTCAAGAGTTGTTTACTGAGTTTATTTTATTTGATCAAAAAGGGAATACAATCAGGAACTT
TCAAAATATTTTTCCAAAATTTGTTTCAGATGTAAAAAAAGAGCTTTCTCACTATTTAGAGACTCTTGAGGTTTGTTCTA
GTTCAATGATGGTAAATCATCTATCTTATACCTTCATCACTCATACCAAACATTTGGTGATTAATTTGCTACAAAATCAG
CCTAAACTAAAGGTTTTGGTTATGAGTAATTTTGATCAGTATCATGCAAAATTCGTTGCAGAGACACTTTCTTATTACTG
TAGCAATAATTTTGAACTGGAAGTTTGGACTGAATTAGAATTATCAAAGGAATCTTTAGAAGATTCACCTTATGATATCA
TTATTTCTAATTTTATTATTCCTCCTATTGAAAATAAGAGACTCATCTATTCAAATAATATAAACACGGTCTCACTCATA
TACTTGTTAAATGCCATGATGTTTATTCGATTAGATGAGTAA

Upstream 100 bases:

>100_bases
AAAGATTTTAGGAAAAGTCGTTATATCATGCTATACCTATTCTTTGTGGTATAATTGCAAGAGGTTTAATCCGATAATTT
ATAAAGAGAGAAAGATATTC

Downstream 100 bases:

>100_bases
CCAAAAATAACAAAAAAACGCTATTTCGCGTTTGAACTGTACCTCAAAAGTTAGACAGAAAAAGTCTAATTTTTAGGGTG
TTTTTGTTAAGAAAAGACCT

Product: transcriptional activator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MRDLLSKKSHRQLELLELLFEHKRWFHRSELAELLNCTERAVKDDLSHVKSAFPDLIFHSSTNGIRIINTDDSDIEMVYH
HFFKHSTHFSILEFIFFNEGCQAESICKEFYISSSSLYRIISQINKVIKRQFQFEVSLTPVQIIGNERDIRYFFAQYFSE
KYYFLEWPFENFSSEPLSQLLELVYKETSFPMNLSTHRMLKLLLVTNLYRIKFGHFMEVDKDSFNDQSLDFLMQAEGIEG
VAQSFESEYNISLDEEVVCQLFVSYFQKMFFIDESLFMKCVKKDSYVEKSYHLLSDFIDQISVKYQIEIENKDNLIWHLH
NTAHLYRQELFTEFILFDQKGNTIRNFQNIFPKFVSDVKKELSHYLETLEVCSSSMMVNHLSYTFITHTKHLVINLLQNQ
PKLKVLVMSNFDQYHAKFVAETLSYYCSNNFELEVWTELELSKESLEDSPYDIIISNFIIPPIENKRLIYSNNINTVSLI
YLLNAMMFIRLDE

Sequences:

>Translated_493_residues
MRDLLSKKSHRQLELLELLFEHKRWFHRSELAELLNCTERAVKDDLSHVKSAFPDLIFHSSTNGIRIINTDDSDIEMVYH
HFFKHSTHFSILEFIFFNEGCQAESICKEFYISSSSLYRIISQINKVIKRQFQFEVSLTPVQIIGNERDIRYFFAQYFSE
KYYFLEWPFENFSSEPLSQLLELVYKETSFPMNLSTHRMLKLLLVTNLYRIKFGHFMEVDKDSFNDQSLDFLMQAEGIEG
VAQSFESEYNISLDEEVVCQLFVSYFQKMFFIDESLFMKCVKKDSYVEKSYHLLSDFIDQISVKYQIEIENKDNLIWHLH
NTAHLYRQELFTEFILFDQKGNTIRNFQNIFPKFVSDVKKELSHYLETLEVCSSSMMVNHLSYTFITHTKHLVINLLQNQ
PKLKVLVMSNFDQYHAKFVAETLSYYCSNNFELEVWTELELSKESLEDSPYDIIISNFIIPPIENKRLIYSNNINTVSLI
YLLNAMMFIRLDE
>Mature_493_residues
MRDLLSKKSHRQLELLELLFEHKRWFHRSELAELLNCTERAVKDDLSHVKSAFPDLIFHSSTNGIRIINTDDSDIEMVYH
HFFKHSTHFSILEFIFFNEGCQAESICKEFYISSSSLYRIISQINKVIKRQFQFEVSLTPVQIIGNERDIRYFFAQYFSE
KYYFLEWPFENFSSEPLSQLLELVYKETSFPMNLSTHRMLKLLLVTNLYRIKFGHFMEVDKDSFNDQSLDFLMQAEGIEG
VAQSFESEYNISLDEEVVCQLFVSYFQKMFFIDESLFMKCVKKDSYVEKSYHLLSDFIDQISVKYQIEIENKDNLIWHLH
NTAHLYRQELFTEFILFDQKGNTIRNFQNIFPKFVSDVKKELSHYLETLEVCSSSMMVNHLSYTFITHTKHLVINLLQNQ
PKLKVLVMSNFDQYHAKFVAETLSYYCSNNFELEVWTELELSKESLEDSPYDIIISNFIIPPIENKRLIYSNNINTVSLI
YLLNAMMFIRLDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AtxA/AcpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013199
- InterPro:   IPR007737
- InterPro:   IPR013236
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08280 HTH_Mga; PF05043 Mga; PF08270 PRD_Mga [H]

EC number: NA

Molecular weight: Translated: 58724; Mature: 58724

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDLLSKKSHRQLELLELLFEHKRWFHRSELAELLNCTERAVKDDLSHVKSAFPDLIFHS
CCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEC
STNGIRIINTDDSDIEMVYHHFFKHSTHFSILEFIFFNEGCQAESICKEFYISSSSLYRI
CCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHH
ISQINKVIKRQFQFEVSLTPVQIIGNERDIRYFFAQYFSEKYYFLEWPFENFSSEPLSQL
HHHHHHHHHHHHHEEEECCEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHH
LELVYKETSFPMNLSTHRMLKLLLVTNLYRIKFGHFMEVDKDSFNDQSLDFLMQAEGIEG
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHCCHHH
VAQSFESEYNISLDEEVVCQLFVSYFQKMFFIDESLFMKCVKKDSYVEKSYHLLSDFIDQ
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ISVKYQIEIENKDNLIWHLHNTAHLYRQELFTEFILFDQKGNTIRNFQNIFPKFVSDVKK
CEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHH
ELSHYLETLEVCSSSMMVNHLSYTFITHTKHLVINLLQNQPKLKVLVMSNFDQYHAKFVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
ETLSYYCSNNFELEVWTELELSKESLEDSPYDIIISNFIIPPIENKRLIYSNNINTVSLI
HHHHHHHCCCCEEEEEEEHHCCHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCHHHHH
YLLNAMMFIRLDE
HHHHHHHHEEECC
>Mature Secondary Structure
MRDLLSKKSHRQLELLELLFEHKRWFHRSELAELLNCTERAVKDDLSHVKSAFPDLIFHS
CCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEC
STNGIRIINTDDSDIEMVYHHFFKHSTHFSILEFIFFNEGCQAESICKEFYISSSSLYRI
CCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHH
ISQINKVIKRQFQFEVSLTPVQIIGNERDIRYFFAQYFSEKYYFLEWPFENFSSEPLSQL
HHHHHHHHHHHHHEEEECCEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHH
LELVYKETSFPMNLSTHRMLKLLLVTNLYRIKFGHFMEVDKDSFNDQSLDFLMQAEGIEG
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHCCHHH
VAQSFESEYNISLDEEVVCQLFVSYFQKMFFIDESLFMKCVKKDSYVEKSYHLLSDFIDQ
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ISVKYQIEIENKDNLIWHLHNTAHLYRQELFTEFILFDQKGNTIRNFQNIFPKFVSDVKK
CEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHH
ELSHYLETLEVCSSSMMVNHLSYTFITHTKHLVINLLQNQPKLKVLVMSNFDQYHAKFVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
ETLSYYCSNNFELEVWTELELSKESLEDSPYDIIISNFIIPPIENKRLIYSNNINTVSLI
HHHHHHHCCCCEEEEEEEHHCCHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCHHHHH
YLLNAMMFIRLDE
HHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]