Click here to switch to the map view.

The map label for this gene is 116516254

Identifier: 116516254

GI number: 116516254

Start: 854441

End: 854941

Strand: Direct

Name: 116516254

Synonym: SPD_0839

Alternate gene names: NA

Gene position: 854441-854941 (Clockwise)

Preceding gene: 116516028

Following gene: 116517123

Centisome position: 41.76

GC content: 37.33

Gene sequence:

>501_bases
ATGATTGACCAACTATCTAAGTATTACAGTTGTAGGATACTAACTGAAAAGGATATTCCAAGTATTTTATCTTTATATGA
AAGTAATCCTCTGTATTTTCAGCATTGTCCACCAGAACCAAATTTTGCAACTGTAAAAGAGGACATGCTTTGTCTACCTG
AAGGTAAAGCTAAGGCTGATAAGTTTTTTGTTGGATTTTGGAATGGATCTGACCTTGTGGCTGTTATGGATTTTGTCTAT
GCATATCCTGATGAGGAGACTGTTTTTATTGGTTTGTTTATGGTTGATCAAGCCTATCAGAGGAAAGGGATTGGTAGTCA
TATTGTGACAGAAGCACTAGCTTATTTTGCTAAGAACTTTCGAAAGGCACGTTTGGCTTATGTTAAGGGAAATCCGCAAT
CTCAGCATTTTTGGGAAAAGCAGGGCTTTAAATCAATTGGATGCGAGGTTAAGCAAGAACTCTATACGGTTGTTATCGCT
GAACAGAGCCTAGAAGATTAG

Upstream 100 bases:

>100_bases
CGATTAGGCACGATGGAAAGAACTTTTATGTGGCTGATGACGATCAGTGCATCTTCCTGTGTCATAATCACAGGGCACAA
GAAAGTAGGAATTTGAAAAG

Downstream 100 bases:

>100_bases
AAATGGCATCAAGTAAGAACTATTTGGAATTTGTTTTGGAACAATTATCAGGATTAGATGATGTGACTTACCGTTCCATG
ATGGGGGAGTATATTCTTTA

Product: acetyltransferase, GNAT family protein

Products: NA

Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family; Nuclear Protein SET

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MIDQLSKYYSCRILTEKDIPSILSLYESNPLYFQHCPPEPNFATVKEDMLCLPEGKAKADKFFVGFWNGSDLVAVMDFVY
AYPDEETVFIGLFMVDQAYQRKGIGSHIVTEALAYFAKNFRKARLAYVKGNPQSQHFWEKQGFKSIGCEVKQELYTVVIA
EQSLED

Sequences:

>Translated_166_residues
MIDQLSKYYSCRILTEKDIPSILSLYESNPLYFQHCPPEPNFATVKEDMLCLPEGKAKADKFFVGFWNGSDLVAVMDFVY
AYPDEETVFIGLFMVDQAYQRKGIGSHIVTEALAYFAKNFRKARLAYVKGNPQSQHFWEKQGFKSIGCEVKQELYTVVIA
EQSLED
>Mature_166_residues
MIDQLSKYYSCRILTEKDIPSILSLYESNPLYFQHCPPEPNFATVKEDMLCLPEGKAKADKFFVGFWNGSDLVAVMDFVY
AYPDEETVFIGLFMVDQAYQRKGIGSHIVTEALAYFAKNFRKARLAYVKGNPQSQHFWEKQGFKSIGCEVKQELYTVVIA
EQSLED

Specific function: Unknown

COG id: COG0454

COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19065; Mature: 19065

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDQLSKYYSCRILTEKDIPSILSLYESNPLYFQHCPPEPNFATVKEDMLCLPEGKAKAD
CCCCHHHHHEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCEEECCCCEEECCCCCCCCC
KFFVGFWNGSDLVAVMDFVYAYPDEETVFIGLFMVDQAYQRKGIGSHIVTEALAYFAKNF
EEEEEEECCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RKARLAYVKGNPQSQHFWEKQGFKSIGCEVKQELYTVVIAEQSLED
HHHEEEEEECCCCCHHHHHHCCHHHHCHHHHHHHHHHEEECCCCCC
>Mature Secondary Structure
MIDQLSKYYSCRILTEKDIPSILSLYESNPLYFQHCPPEPNFATVKEDMLCLPEGKAKAD
CCCCHHHHHEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCEEECCCCEEECCCCCCCCC
KFFVGFWNGSDLVAVMDFVYAYPDEETVFIGLFMVDQAYQRKGIGSHIVTEALAYFAKNF
EEEEEEECCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RKARLAYVKGNPQSQHFWEKQGFKSIGCEVKQELYTVVIAEQSLED
HHHEEEEEECCCCCHHHHHHCCHHHHCHHHHHHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA