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The map label for this gene is 116516241

Identifier: 116516241

GI number: 116516241

Start: 1158894

End: 1160381

Strand: Direct

Name: 116516241

Synonym: SPD_1128

Alternate gene names: NA

Gene position: 1158894-1160381 (Clockwise)

Preceding gene: 116515939

Following gene: 116516858

Centisome position: 56.64

GC content: 36.63

Gene sequence:

>1488_bases
ATGAAAAGTATAAAATTAAATGCTCTATCTTACATGGGAATTCGTGTCTTGAATATTATTTTTCCCATCCTAACTGGAAC
CTATGTCGCGCGTGTCTTGGACCGAACTGACTATGGTTACTTCAACTCAGTCGACACTATTTTGTCATTTTTCTTGCCCT
TTGCAACTTATGGTGTCTATAACTACGGTTTAAGGGCTATCAGTAATGTCAAGGATAACAAAAAAGATCTTAACAGAACC
TTTTCTAGTCTTTTTTATTTGTGCATCGCTTGTACGATTTTGACCACTGCTGTCTATATCCTAGCCTATCCTCTCTTCTT
TACTGATAATCCAATCGTCAAAAAGGTCTACCTTGTTATGGGGATTCAACTCATTGCCCAGATTTTTTCAATCGAATGGG
TCAATGAAGCTCTGGAAAATTACAGTTTTCTCTTTTACAAAACTGCCTTCATCCGTATCCTGATGCTGGTCTCTATTTTC
TTATTTGTTAAAAATGAACACGATATTGTTGTCTATACACTTGTGATGAGTTTATCGACGCTGATTAACTACCTGATTAG
TTATTTTTGGATTAAAAGAGACATCAAACTTGTTAAAATTCACCTAAGTGATTTTAAACCACTCTTTCTCCCTCTGACAG
CCATGTTAGTCTTTGCCAATGCCAATATGCTCTTCACTTTTTTAGATCGCCTCTTCCTCGTTAAAACAGGGATTGATGTC
AACGTTAGTTACTATACCATAGCTCAGCGAATTGTGACCGTTATAGCTGGGGTTGTAACAGGTGCAATTGGAGTGAGTGT
GCCTCGTCTCAGTTACTATCTGGGGAAAGGAGACAAAGAAGCCTATGTTTCTCTGGTTAATAGAGGTAGTCGAATCTTTA
ACTTCTTTATCATTCCACTGAGTTTTGGACTCATGGTTTTAGGACCAAATGCCATCCTACTTTACGGTAGTGAAAAATAT
ATCGGAGGCGGCATCTTGACCTCTCTCTTCGCTTTTCGTACGATTATCCTGGCCTTAGATACCATTCTTGGTTCCCAAAT
TCTCTTTACCAATGGCTATGAAAAACGTATCACAGTCTATACAGTCTTTGCTGGGCTACTCAATTTGGGCTTGAATAGTC
TCCTTTTTTTCAACCATATCGTGGCTCCTGAATACTACTTACTGACAACTATGCTATCAGAGACTTCTCTACTTGTTTTC
TATATCATTTTCATCCATAGAAAACAACTCATCCACTTGGGACATATCTTTAGCTATACTGTTCGATACTCTCTCTTTTC
ACTTTCCTTTGTAGCAATTTATTTCCTGATTAATTTCGTGTATCCTGTAGATATGGTCATTAATTTGCCATTTTTGATTA
ATACTGGTTTGATTGTCTTGCTATCAGCTATCTCTTATATTAGTCTACTTGTCTTCACAAAAGATAGCATTTTCTATGAA
TTTTTAAACCATGTCCTAGCCTTAAAAAATAAATTTAAAAAATCATAG

Upstream 100 bases:

>100_bases
TAAAACTTAAGATTTGAAACTTCAAAGTGATTACTTGACTTACTGCCCTTCATTTCTTATTAGCTAACTTTATGATATAA
TGAAAAACGAGGTAAATTGA

Downstream 100 bases:

>100_bases
GAGTTTAAAATGAAACAACTAACCGTTGAAGATGCCAAACAAATTGAATTAGAAATTTTGGATTATATTGATACTCTCTG
TAAAAAGCACAATATCAACT

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: Flippase Wzx; PST Family Polysaccharide Transporter; Repeat Unit Transporter; Polysaccharide Transporter; LPS Biosynthesis Related Flippase; Polysaccharide Transporter PST Family; PST System Family Polysaccharide Transporter; Oligosaccharide Translocase; Heteropolysaccharide Repeat-Containing Protein; Polysaccharide Transporter Protein; Polymerization And Export Protein; O-Antigen Transporter; Polysaccharide Transporter Pst Family; Wzx Flippase; CPS Repeat-Containing Transporter; Polysaccharide Synthase Family Protein; Oligosaccharide Repeat-Containing Transporter; Polysaccharide Repeat-Containing Transporter; Oligosaccharide Repeat-Containing Polymerase; Oligosaccharide Repeat Unit Transporter; Capsular Polysaccharide Synthesis Protein; Spore Cortex Biosynthesis Protein; PTS System Polysaccharide Transporter

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MKSIKLNALSYMGIRVLNIIFPILTGTYVARVLDRTDYGYFNSVDTILSFFLPFATYGVYNYGLRAISNVKDNKKDLNRT
FSSLFYLCIACTILTTAVYILAYPLFFTDNPIVKKVYLVMGIQLIAQIFSIEWVNEALENYSFLFYKTAFIRILMLVSIF
LFVKNEHDIVVYTLVMSLSTLINYLISYFWIKRDIKLVKIHLSDFKPLFLPLTAMLVFANANMLFTFLDRLFLVKTGIDV
NVSYYTIAQRIVTVIAGVVTGAIGVSVPRLSYYLGKGDKEAYVSLVNRGSRIFNFFIIPLSFGLMVLGPNAILLYGSEKY
IGGGILTSLFAFRTIILALDTILGSQILFTNGYEKRITVYTVFAGLLNLGLNSLLFFNHIVAPEYYLLTTMLSETSLLVF
YIIFIHRKQLIHLGHIFSYTVRYSLFSLSFVAIYFLINFVYPVDMVINLPFLINTGLIVLLSAISYISLLVFTKDSIFYE
FLNHVLALKNKFKKS

Sequences:

>Translated_495_residues
MKSIKLNALSYMGIRVLNIIFPILTGTYVARVLDRTDYGYFNSVDTILSFFLPFATYGVYNYGLRAISNVKDNKKDLNRT
FSSLFYLCIACTILTTAVYILAYPLFFTDNPIVKKVYLVMGIQLIAQIFSIEWVNEALENYSFLFYKTAFIRILMLVSIF
LFVKNEHDIVVYTLVMSLSTLINYLISYFWIKRDIKLVKIHLSDFKPLFLPLTAMLVFANANMLFTFLDRLFLVKTGIDV
NVSYYTIAQRIVTVIAGVVTGAIGVSVPRLSYYLGKGDKEAYVSLVNRGSRIFNFFIIPLSFGLMVLGPNAILLYGSEKY
IGGGILTSLFAFRTIILALDTILGSQILFTNGYEKRITVYTVFAGLLNLGLNSLLFFNHIVAPEYYLLTTMLSETSLLVF
YIIFIHRKQLIHLGHIFSYTVRYSLFSLSFVAIYFLINFVYPVDMVINLPFLINTGLIVLLSAISYISLLVFTKDSIFYE
FLNHVLALKNKFKKS
>Mature_495_residues
MKSIKLNALSYMGIRVLNIIFPILTGTYVARVLDRTDYGYFNSVDTILSFFLPFATYGVYNYGLRAISNVKDNKKDLNRT
FSSLFYLCIACTILTTAVYILAYPLFFTDNPIVKKVYLVMGIQLIAQIFSIEWVNEALENYSFLFYKTAFIRILMLVSIF
LFVKNEHDIVVYTLVMSLSTLINYLISYFWIKRDIKLVKIHLSDFKPLFLPLTAMLVFANANMLFTFLDRLFLVKTGIDV
NVSYYTIAQRIVTVIAGVVTGAIGVSVPRLSYYLGKGDKEAYVSLVNRGSRIFNFFIIPLSFGLMVLGPNAILLYGSEKY
IGGGILTSLFAFRTIILALDTILGSQILFTNGYEKRITVYTVFAGLLNLGLNSLLFFNHIVAPEYYLLTTMLSETSLLVF
YIIFIHRKQLIHLGHIFSYTVRYSLFSLSFVAIYFLINFVYPVDMVINLPFLINTGLIVLLSAISYISLLVFTKDSIFYE
FLNHVLALKNKFKKS

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56519; Mature: 56519

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIKLNALSYMGIRVLNIIFPILTGTYVARVLDRTDYGYFNSVDTILSFFLPFATYGVY
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
NYGLRAISNVKDNKKDLNRTFSSLFYLCIACTILTTAVYILAYPLFFTDNPIVKKVYLVM
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
GIQLIAQIFSIEWVNEALENYSFLFYKTAFIRILMLVSIFLFVKNEHDIVVYTLVMSLST
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH
LINYLISYFWIKRDIKLVKIHLSDFKPLFLPLTAMLVFANANMLFTFLDRLFLVKTGIDV
HHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCE
NVSYYTIAQRIVTVIAGVVTGAIGVSVPRLSYYLGKGDKEAYVSLVNRGSRIFNFFIIPL
EEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHEEEHHH
SFGLMVLGPNAILLYGSEKYIGGGILTSLFAFRTIILALDTILGSQILFTNGYEKRITVY
HCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHH
TVFAGLLNLGLNSLLFFNHIVAPEYYLLTTMLSETSLLVFYIIFIHRKQLIHLGHIFSYT
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRYSLFSLSFVAIYFLINFVYPVDMVINLPFLINTGLIVLLSAISYISLLVFTKDSIFYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
FLNHVLALKNKFKKS
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSIKLNALSYMGIRVLNIIFPILTGTYVARVLDRTDYGYFNSVDTILSFFLPFATYGVY
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
NYGLRAISNVKDNKKDLNRTFSSLFYLCIACTILTTAVYILAYPLFFTDNPIVKKVYLVM
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
GIQLIAQIFSIEWVNEALENYSFLFYKTAFIRILMLVSIFLFVKNEHDIVVYTLVMSLST
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH
LINYLISYFWIKRDIKLVKIHLSDFKPLFLPLTAMLVFANANMLFTFLDRLFLVKTGIDV
HHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCE
NVSYYTIAQRIVTVIAGVVTGAIGVSVPRLSYYLGKGDKEAYVSLVNRGSRIFNFFIIPL
EEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHEEEHHH
SFGLMVLGPNAILLYGSEKYIGGGILTSLFAFRTIILALDTILGSQILFTNGYEKRITVY
HCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHH
TVFAGLLNLGLNSLLFFNHIVAPEYYLLTTMLSETSLLVFYIIFIHRKQLIHLGHIFSYT
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRYSLFSLSFVAIYFLINFVYPVDMVINLPFLINTGLIVLLSAISYISLLVFTKDSIFYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
FLNHVLALKNKFKKS
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA