Definition | Streptococcus pneumoniae D39, complete genome. |
---|---|
Accession | NC_008533 |
Length | 2,046,115 |
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The map label for this gene is phoH [H]
Identifier: 116516028
GI number: 116516028
Start: 853280
End: 854248
Strand: Direct
Name: phoH [H]
Synonym: SPD_0838
Alternate gene names: 116516028
Gene position: 853280-854248 (Clockwise)
Preceding gene: 116517068
Following gene: 116516254
Centisome position: 41.7
GC content: 45.3
Gene sequence:
>969_bases TTGAAGGAACATTCAATAGACATTCAACTGAGTCATCCAGATGACCTGTTTCATCTTTTTGGTTCCAATGAACGCCATCT TCGTTTGATGGAAGAAGAGCTTGATGTTGTGATTCATGCTCGTACGGAGATTGTCCAGGTTTTGGGAGAAGAGTCTGCCT GTGAGGAAGCCCGTCAAGTTATTCAGGCTTTGATGGTCTTGGTAAATCGTGGGATGACCGTTGGTACGCCAGATGTAGTC ACTGCGATTAGCATGGTCAAAAATGATGAAATTGACAAGTTTGTCGCCCTTTACGAAGAAGAAATTATCAAAGATAATAC TGGGAAACCTATCCGTGTCAAAACCCTAGGGCAAAAGCTTTATGTGGACAGTGTCAAACAGCATGATGTGACCTTTGGAA TTGGGCCAGCAGGTACAGGGAAGACCTTCCTTGCAGTGACCTTGGCAGTGACTGCCCTTAAACGTGGGCAAGTCAAGCGA ATTATCCTAACTCGTCCAGCGGTGGAAGCGGGAGAGAGTCTTGGATTTCTTCCGGGTGATCTTAAGGAGAAGGTGGATCC TTACCTTCGTCCTGTTTACGATGCCTTGTATCAAATTCTTGGGAAAGACCAAACGACTCGTCTCATGGAGCGTGAAATTA TCGAAATTGCGCCCCTTGCCTATATGCGTGGCCGGACCTTGGATGATGCCTTTGTCATTCTCGATGAGGCGCAAAACACG ACCATCATGCAGATGAAGATGTTCTTGACGCGTTTAGGCTTTCATTCTAAGATGATTGTCAATGGAGATATCAGTCAGAT TGACCTGCCACGTAATGTCAAGTCCGGTTTGATTGATGCTCAAGAGAAACTCAAGAACATCCATCAGATTGACTTTGTTC ATTTTTCAGCCAAGGATGTGGTTCGCCATCCAGTTGTCGCTCAGATTATCCGAGCCTATGAATATTCTACTGAAGTTGCA CACGACTGA
Upstream 100 bases:
>100_bases TATCTAGAACACTAGCATTTATTCATTGGGTTTGGGCTAGTAATTTCTCCATCCCTCTGCTATAATAAAAAGAAATAAAA GGATTAGAGAGGTTCTTTAT
Downstream 100 bases:
>100_bases TTTTGAGGAAGTTCGCCTGCAAAAGAATATACTTTTGAGAGAGGAAAATCCAGTTGTATAGGCTAAAGGTTTTATCCAAA GGTCTGAGACAACGATTAGG
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MKEHSIDIQLSHPDDLFHLFGSNERHLRLMEEELDVVIHARTEIVQVLGEESACEEARQVIQALMVLVNRGMTVGTPDVV TAISMVKNDEIDKFVALYEEEIIKDNTGKPIRVKTLGQKLYVDSVKQHDVTFGIGPAGTGKTFLAVTLAVTALKRGQVKR IILTRPAVEAGESLGFLPGDLKEKVDPYLRPVYDALYQILGKDQTTRLMEREIIEIAPLAYMRGRTLDDAFVILDEAQNT TIMQMKMFLTRLGFHSKMIVNGDISQIDLPRNVKSGLIDAQEKLKNIHQIDFVHFSAKDVVRHPVVAQIIRAYEYSTEVA HD
Sequences:
>Translated_322_residues MKEHSIDIQLSHPDDLFHLFGSNERHLRLMEEELDVVIHARTEIVQVLGEESACEEARQVIQALMVLVNRGMTVGTPDVV TAISMVKNDEIDKFVALYEEEIIKDNTGKPIRVKTLGQKLYVDSVKQHDVTFGIGPAGTGKTFLAVTLAVTALKRGQVKR IILTRPAVEAGESLGFLPGDLKEKVDPYLRPVYDALYQILGKDQTTRLMEREIIEIAPLAYMRGRTLDDAFVILDEAQNT TIMQMKMFLTRLGFHSKMIVNGDISQIDLPRNVKSGLIDAQEKLKNIHQIDFVHFSAKDVVRHPVVAQIIRAYEYSTEVA HD >Mature_322_residues MKEHSIDIQLSHPDDLFHLFGSNERHLRLMEEELDVVIHARTEIVQVLGEESACEEARQVIQALMVLVNRGMTVGTPDVV TAISMVKNDEIDKFVALYEEEIIKDNTGKPIRVKTLGQKLYVDSVKQHDVTFGIGPAGTGKTFLAVTLAVTALKRGQVKR IILTRPAVEAGESLGFLPGDLKEKVDPYLRPVYDALYQILGKDQTTRLMEREIIEIAPLAYMRGRTLDDAFVILDEAQNT TIMQMKMFLTRLGFHSKMIVNGDISQIDLPRNVKSGLIDAQEKLKNIHQIDFVHFSAKDVVRHPVVAQIIRAYEYSTEVA HD
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=209, Percent_Identity=63.1578947368421, Blast_Score=276, Evalue=1e-75, Organism=Escherichia coli, GI1787257, Length=280, Percent_Identity=41.7857142857143, Blast_Score=197, Evalue=1e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 36272; Mature: 36272
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEHSIDIQLSHPDDLFHLFGSNERHLRLMEEELDVVIHARTEIVQVLGEESACEEARQV CCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHEEEHHHHHHHHHHCCHHHHHHHHHH IQALMVLVNRGMTVGTPDVVTAISMVKNDEIDKFVALYEEEIIKDNTGKPIRVKTLGQKL HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHH YVDSVKQHDVTFGIGPAGTGKTFLAVTLAVTALKRGQVKRIILTRPAVEAGESLGFLPGD HHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHCCCCCCCCCCH LKEKVDPYLRPVYDALYQILGKDQTTRLMEREIIEIAPLAYMRGRTLDDAFVILDEAQNT HHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC TIMQMKMFLTRLGFHSKMIVNGDISQIDLPRNVKSGLIDAQEKLKNIHQIDFVHFSAKDV HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECHHHH VRHPVVAQIIRAYEYSTEVAHD HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKEHSIDIQLSHPDDLFHLFGSNERHLRLMEEELDVVIHARTEIVQVLGEESACEEARQV CCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHEEEHHHHHHHHHHCCHHHHHHHHHH IQALMVLVNRGMTVGTPDVVTAISMVKNDEIDKFVALYEEEIIKDNTGKPIRVKTLGQKL HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHH YVDSVKQHDVTFGIGPAGTGKTFLAVTLAVTALKRGQVKRIILTRPAVEAGESLGFLPGD HHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHCCCCCCCCCCH LKEKVDPYLRPVYDALYQILGKDQTTRLMEREIIEIAPLAYMRGRTLDDAFVILDEAQNT HHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC TIMQMKMFLTRLGFHSKMIVNGDISQIDLPRNVKSGLIDAQEKLKNIHQIDFVHFSAKDV HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECHHHH VRHPVVAQIIRAYEYSTEVAHD HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]