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The map label for this gene is yxeH [H]

Identifier: 116516008

GI number: 116516008

Start: 833996

End: 834805

Strand: Reverse

Name: yxeH [H]

Synonym: SPD_0816

Alternate gene names: 116516008

Gene position: 834805-833996 (Counterclockwise)

Preceding gene: 116516019

Following gene: 116515443

Centisome position: 40.8

GC content: 44.07

Gene sequence:

>810_bases
ATGATTAAACTACTAGCCTTGGATATGGACGGCACCCTCCTCAATGAAGCCAAGGAAATCCCACAAGCTCACATTACTGC
TATTCACAAAGCCATTGAAAAAGGTGTCAAACTGGTTCTCTGTACGGGTCGCCCCCTTTTCGGTGTCCTCCCCTACTACA
AAAAACTGGGACTCGACCTCCAGAATGAGTATGTGATTGTTAACAACGGTTGTTCAACTCACCAGACTAGCGACTGGGGC
TTGGTTGACTGGCAAGAACTTAGTCCAGCTGACATCGAATACCTCTATGACCTTGCTGAAAAGAGTGATGTTCAGTTGAC
ACTTTTTGACGAGTCACATTATTTTGTTCTCGGTGGAAAGCCCAATCAAGTTATTGAAAATGATGCTAAACTAGTATTTT
CAGACCTGACTGAAATTTCTCTTGAGGAAGCGACTAGTGGAAAGTTCCGGATGTTCCAAGGTATGTTTTTAGGAACAAAA
GAACAAACAGACGATTTTGAGCAGCGTTTTGCTGAAGAGCTTTGCCAACGATTCAGTGGAGTTCGTTCGCAGCCTGTCAT
TTATGAAGCAATGCCACTTGGAACGACAAAGGCTACTGCTCTTTCACGACTAGCTGAGATTTTGAAGATTGATTCCTCAG
AGATTATGGCCATGGGCGATGCTAATAACGATATCGAAATGCTCCAGTTTGCAGGGCTTGGGATTGCAATGGGAAATGCC
AGCGATTATGTCAAATCTCTTGCGGATGCCGTTACCTCAAGCAACGAAGAAGACGGCGTTGCGCGTGCTATTGAGAAATA
TATTCTATAA

Upstream 100 bases:

>100_bases
AAAACATCTTAAACTATAAAATCAATTAGTCTCAAGCTTTCTATCAATTTCTTCTCCAAAATATGCTATAATAATAGCAA
AAGATAAAGAAGGAAGACCT

Downstream 100 bases:

>100_bases
AAAAGAAAAGCAAATAGACAGAAGTTACTGCTATTTGCTTTTTTGCTAATATTTTAAAATACGGACTAATCAATAGAGAA
GAATAGCGAATCATAAAAAT

Product: Cof family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MIKLLALDMDGTLLNEAKEIPQAHITAIHKAIEKGVKLVLCTGRPLFGVLPYYKKLGLDLQNEYVIVNNGCSTHQTSDWG
LVDWQELSPADIEYLYDLAEKSDVQLTLFDESHYFVLGGKPNQVIENDAKLVFSDLTEISLEEATSGKFRMFQGMFLGTK
EQTDDFEQRFAEELCQRFSGVRSQPVIYEAMPLGTTKATALSRLAEILKIDSSEIMAMGDANNDIEMLQFAGLGIAMGNA
SDYVKSLADAVTSSNEEDGVARAIEKYIL

Sequences:

>Translated_269_residues
MIKLLALDMDGTLLNEAKEIPQAHITAIHKAIEKGVKLVLCTGRPLFGVLPYYKKLGLDLQNEYVIVNNGCSTHQTSDWG
LVDWQELSPADIEYLYDLAEKSDVQLTLFDESHYFVLGGKPNQVIENDAKLVFSDLTEISLEEATSGKFRMFQGMFLGTK
EQTDDFEQRFAEELCQRFSGVRSQPVIYEAMPLGTTKATALSRLAEILKIDSSEIMAMGDANNDIEMLQFAGLGIAMGNA
SDYVKSLADAVTSSNEEDGVARAIEKYIL
>Mature_269_residues
MIKLLALDMDGTLLNEAKEIPQAHITAIHKAIEKGVKLVLCTGRPLFGVLPYYKKLGLDLQNEYVIVNNGCSTHQTSDWG
LVDWQELSPADIEYLYDLAEKSDVQLTLFDESHYFVLGGKPNQVIENDAKLVFSDLTEISLEEATSGKFRMFQGMFLGTK
EQTDDFEQRFAEELCQRFSGVRSQPVIYEAMPLGTTKATALSRLAEILKIDSSEIMAMGDANNDIEMLQFAGLGIAMGNA
SDYVKSLADAVTSSNEEDGVARAIEKYIL

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=273, Percent_Identity=34.0659340659341, Blast_Score=140, Evalue=7e-35,
Organism=Escherichia coli, GI87081741, Length=251, Percent_Identity=26.2948207171315, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI48994981, Length=272, Percent_Identity=25.3676470588235, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150
- InterPro:   IPR006380 [H]

Pfam domain/function: PF00702 Hydrolase; PF05116 S6PP [H]

EC number: NA

Molecular weight: Translated: 29822; Mature: 29822

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLLALDMDGTLLNEAKEIPQAHITAIHKAIEKGVKLVLCTGRPLFGVLPYYKKLGLDL
CEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCC
QNEYVIVNNGCSTHQTSDWGLVDWQELSPADIEYLYDLAEKSDVQLTLFDESHYFVLGGK
CCCEEEEECCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCEEEEEECCEEEEECCC
PNQVIENDAKLVFSDLTEISLEEATSGKFRMFQGMFLGTKEQTDDFEQRFAEELCQRFSG
CCHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEHHEEECCCCCCHHHHHHHHHHHHHHHHC
VRSQPVIYEAMPLGTTKATALSRLAEILKIDSSEIMAMGDANNDIEMLQFAGLGIAMGNA
CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCEEEECCH
SDYVKSLADAVTSSNEEDGVARAIEKYIL
HHHHHHHHHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MIKLLALDMDGTLLNEAKEIPQAHITAIHKAIEKGVKLVLCTGRPLFGVLPYYKKLGLDL
CEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCC
QNEYVIVNNGCSTHQTSDWGLVDWQELSPADIEYLYDLAEKSDVQLTLFDESHYFVLGGK
CCCEEEEECCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCEEEEEECCEEEEECCC
PNQVIENDAKLVFSDLTEISLEEATSGKFRMFQGMFLGTKEQTDDFEQRFAEELCQRFSG
CCHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEHHEEECCCCCCHHHHHHHHHHHHHHHHC
VRSQPVIYEAMPLGTTKATALSRLAEILKIDSSEIMAMGDANNDIEMLQFAGLGIAMGNA
CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCEEEECCH
SDYVKSLADAVTSSNEEDGVARAIEKYIL
HHHHHHHHHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377 [H]