| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116515953
Identifier: 116515953
GI number: 116515953
Start: 9070
End: 10338
Strand: Direct
Name: 116515953
Synonym: SPD_0010
Alternate gene names: NA
Gene position: 9070-10338 (Clockwise)
Preceding gene: 116516840
Following gene: 116516781
Centisome position: 0.44
GC content: 32.78
Gene sequence:
>1269_bases ATGCGTAAATTCTTAATTATTTTGTTGCTACCAAGTTTTTTGACCATTTCAAAAGTCGTTAGCACAGAAAAAGAAGTCGT CTATACTTCGAAAGAAATTTATTACCTTTCACAATCTGACTTTGGTATTTATTTTAGAGAAAAATTAAGTTCTCCCATGG TTTATGGAGAGGTTCCTGTTTATGCGAATGAAGATTTAGTAGTGGAATCTGGGAAATTGACTCCCAAAACAAGTTTTCAA ATAACCGAGTGGCGCTTAAATAAACAAGGAATTCCAGTATTTAAGCTATCAAATCATCAATTTATAGCTGCGGACAAACG ATTTTTATATGATCAATCAGAGGTAACTCCAACAATAAAAAAAGTATGGTTAGAATCTGACTTTAAACTGTACAATAGTC CTTATGATTTAAAAGAAGTGAAATCATCCTTATCAGCTTATTCGCAAGTATCAATCGACAAGACCATGTTTGTAGAAGGA AGAGAATTTCTACATATTGATCAGGCTGGATGGGTAGCTAAAGAATCAACTTCTGAAGAAGATAATCGGATGAGTAAAGT TCAAGAAATGTTATCTGAAAAATATCAGAAAGATTCTTTCTCTATTTATGTTAAGCAACTGACTACTGGAAAAGAAGCTG GTATCAATCAAGATGAAAAGATGTATGCAGCCAGCGTTTTGAAACTCTCTTATCTCTATTATACGCAAGAAAAAATAAAT GAGGGTCTTTATCAGTTAGATACGACTGTAAAATACGTATCTGCAGTCAATGATTTTCCAGGTTCTTATAAACCAGAGGG AAGTGGTAGTCTTCCTAAAAAAGAAGATAATAAAGAATATTCTTTAAAGGATTTAATTACGAAAGTATCAAAAGAATCTG ATAATGTAGCTCATAATCTATTGGGATATTACATTTCAAACCAATCTGATGCCACATTCAAATCCAAGATGTCTGCCATT ATGGGAGATGATTGGGATCCAAAAGAAAAATTGATTTCTTCTAAGATGGCCGGGAAGTTTATGGAAGCTATTTATAATCA AAATGGATTTGTGCTAGAGTCTTTGACTAAAACAGATTTTGATAGTCAGCGAATTGCCAAAGGTGTTTCTGTTAAAGTAG CTCATAAAATTGGAGATGCGGATGAATTTAAGCATGATACGGGTGTTGTCTATGCAGATTCTCCATTTATTCTTTCTATT TTCACTAAGAATTCTGATTATGATACGATTTCTAAGATAGCCAAGGATGTTTATGAGGTTCTAAAATGA
Upstream 100 bases:
>100_bases GACGTAATAGAGCAATTTTTGAGTTTGTCAGATGAAAAGCTGGAAGAATTGGCTGATAAAAATCAATTATTGCGTTTACA AGAAGAAAAGGAAAGGAAGA
Downstream 100 bases:
>100_bases GGGAACCAGATTTTTTAAATCATTTTCTCAAGAAGGGATATTTCAAAAAGCATGCTAAGGCGGTTCTAGCTCTTTCTGGT GGATTAGATTCCATGTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Lactamase Class A; Beta-Lactamase-Type Transpeptidase; Beta-Lactamase Class A-Like Protein; Exported Protein
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MRKFLIILLLPSFLTISKVVSTEKEVVYTSKEIYYLSQSDFGIYFREKLSSPMVYGEVPVYANEDLVVESGKLTPKTSFQ ITEWRLNKQGIPVFKLSNHQFIAADKRFLYDQSEVTPTIKKVWLESDFKLYNSPYDLKEVKSSLSAYSQVSIDKTMFVEG REFLHIDQAGWVAKESTSEEDNRMSKVQEMLSEKYQKDSFSIYVKQLTTGKEAGINQDEKMYAASVLKLSYLYYTQEKIN EGLYQLDTTVKYVSAVNDFPGSYKPEGSGSLPKKEDNKEYSLKDLITKVSKESDNVAHNLLGYYISNQSDATFKSKMSAI MGDDWDPKEKLISSKMAGKFMEAIYNQNGFVLESLTKTDFDSQRIAKGVSVKVAHKIGDADEFKHDTGVVYADSPFILSI FTKNSDYDTISKIAKDVYEVLK
Sequences:
>Translated_422_residues MRKFLIILLLPSFLTISKVVSTEKEVVYTSKEIYYLSQSDFGIYFREKLSSPMVYGEVPVYANEDLVVESGKLTPKTSFQ ITEWRLNKQGIPVFKLSNHQFIAADKRFLYDQSEVTPTIKKVWLESDFKLYNSPYDLKEVKSSLSAYSQVSIDKTMFVEG REFLHIDQAGWVAKESTSEEDNRMSKVQEMLSEKYQKDSFSIYVKQLTTGKEAGINQDEKMYAASVLKLSYLYYTQEKIN EGLYQLDTTVKYVSAVNDFPGSYKPEGSGSLPKKEDNKEYSLKDLITKVSKESDNVAHNLLGYYISNQSDATFKSKMSAI MGDDWDPKEKLISSKMAGKFMEAIYNQNGFVLESLTKTDFDSQRIAKGVSVKVAHKIGDADEFKHDTGVVYADSPFILSI FTKNSDYDTISKIAKDVYEVLK >Mature_422_residues MRKFLIILLLPSFLTISKVVSTEKEVVYTSKEIYYLSQSDFGIYFREKLSSPMVYGEVPVYANEDLVVESGKLTPKTSFQ ITEWRLNKQGIPVFKLSNHQFIAADKRFLYDQSEVTPTIKKVWLESDFKLYNSPYDLKEVKSSLSAYSQVSIDKTMFVEG REFLHIDQAGWVAKESTSEEDNRMSKVQEMLSEKYQKDSFSIYVKQLTTGKEAGINQDEKMYAASVLKLSYLYYTQEKIN EGLYQLDTTVKYVSAVNDFPGSYKPEGSGSLPKKEDNKEYSLKDLITKVSKESDNVAHNLLGYYISNQSDATFKSKMSAI MGDDWDPKEKLISSKMAGKFMEAIYNQNGFVLESLTKTDFDSQRIAKGVSVKVAHKIGDADEFKHDTGVVYADSPFILSI FTKNSDYDTISKIAKDVYEVLK
Specific function: Unknown
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48131; Mature: 48131
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: PS00284 SERPIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKFLIILLLPSFLTISKVVSTEKEVVYTSKEIYYLSQSDFGIYFREKLSSPMVYGEVPV CCCEEEEEHHHHHHHHHHHHCCCHHEEEECCEEEEEECCCCCCHHHHHHCCCEEEECCCE YANEDLVVESGKLTPKTSFQITEWRLNKQGIPVFKLSNHQFIAADKRFLYDQSEVTPTIK EECCCEEEECCCCCCCCCEEEEEEEECCCCCCEEEECCCEEEECCHHHCCCCHHCCHHHH KVWLESDFKLYNSPYDLKEVKSSLSAYSQVSIDKTMFVEGREFLHIDQAGWVAKESTSEE HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCEECCCCCCH DNRMSKVQEMLSEKYQKDSFSIYVKQLTTGKEAGINQDEKMYAASVLKLSYLYYTQEKIN HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EGLYQLDTTVKYVSAVNDFPGSYKPEGSGSLPKKEDNKEYSLKDLITKVSKESDNVAHNL CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHH LGYYISNQSDATFKSKMSAIMGDDWDPKEKLISSKMAGKFMEAIYNQNGFVLESLTKTDF HHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCC DSQRIAKGVSVKVAHKIGDADEFKHDTGVVYADSPFILSIFTKNSDYDTISKIAKDVYEV CHHHHHCCCEEEEEECCCCHHHCCCCCCEEEECCCEEEEEEECCCCHHHHHHHHHHHHHH LK HC >Mature Secondary Structure MRKFLIILLLPSFLTISKVVSTEKEVVYTSKEIYYLSQSDFGIYFREKLSSPMVYGEVPV CCCEEEEEHHHHHHHHHHHHCCCHHEEEECCEEEEEECCCCCCHHHHHHCCCEEEECCCE YANEDLVVESGKLTPKTSFQITEWRLNKQGIPVFKLSNHQFIAADKRFLYDQSEVTPTIK EECCCEEEECCCCCCCCCEEEEEEEECCCCCCEEEECCCEEEECCHHHCCCCHHCCHHHH KVWLESDFKLYNSPYDLKEVKSSLSAYSQVSIDKTMFVEGREFLHIDQAGWVAKESTSEE HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCEECCCCCCH DNRMSKVQEMLSEKYQKDSFSIYVKQLTTGKEAGINQDEKMYAASVLKLSYLYYTQEKIN HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EGLYQLDTTVKYVSAVNDFPGSYKPEGSGSLPKKEDNKEYSLKDLITKVSKESDNVAHNL CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHH LGYYISNQSDATFKSKMSAIMGDDWDPKEKLISSKMAGKFMEAIYNQNGFVLESLTKTDF HHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCC DSQRIAKGVSVKVAHKIGDADEFKHDTGVVYADSPFILSIFTKNSDYDTISKIAKDVYEV CHHHHHCCCEEEEEECCCCHHHCCCCCCEEEECCCEEEEEEECCCCHHHHHHHHHHHHHH LK HC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA